Rhincodon typus (whale shark): 109932220
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Entry
109932220 CDS
T06055
Symbol
htr3a
Name
(RefSeq) 5-hydroxytryptamine receptor 3A
KO
K04819
5-hydroxytryptamine receptor 3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109932220 (htr3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109932220 (htr3a)
Ion channels [BR:
rtp04040
]
Ligand-gated channels
Serotonin (5-HT3)
109932220 (htr3a)
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
109932220
NCBI-ProteinID:
XP_048471543
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Position
32:complement(6321331..6341801)
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AA seq
481 aa
AA seq
DB search
MNFYSFWASVPLILTTLLLSEGQRSGNQTESPRPGLLQLSDYLMTNYSKGVRPVRDWRKT
TTVAIDVMVYAILDVDEKNQVLTTYIWYRQIWTDEFLMWNPKNFDDIKQISIPTANIWVP
DILINEFVDVGKSPDIPYVYVDYEGRVKNYKPIQVVTACSLDIYNFPFDVQNCTFTFTSW
LHNIQDINISLWRSAELVKYDRSVFMNQGEWELLYVDTQFNEFNLERGLSAGYAEMRFFL
VIRRRPLFYAVSLLLPSIFLMVMDIIGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLP
ATAIGTPLIGVYFVVCMALLVISLTETILIVQLVHKQDLRSHAPEWVKSLILDKATVLLC
LRNKTQFRSMRQHSETSDNARDRKDSMVQLNHFACENGTDCEKPLSSSLPQADTHLTVDN
ILHEISAIRQFLEKRDEYRDIAKEWLQIGYVLDVLLFRVYLVAVLAYAISLGTLWSIWQY
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctactctttctgggcatctgttcctttgattctcacaacattgttgctttct
gaaggacagagaagtggaaaccaaacagagagcccaagaccaggtttactccagctttcg
gactatctcatgaccaattattccaagggagtccgtcctgtacgagactggaggaaaaca
acaacagtggctattgatgtcatggtgtatgcaattctagatgtggatgagaaaaatcaa
gttttaaccacttatatctggtaccgacagatctggacagatgaattcttgatgtggaat
cccaagaactttgatgacatcaagcagatatcaattcccactgcaaacatatgggtgcca
gacattttaataaatgaatttgttgatgtaggtaagtcacctgatatcccatacgtctac
gttgactatgaaggccgagtgaaaaactacaaacccatccaagtagttactgcctgtagc
ctggatatctacaacttcccatttgacgtccagaactgcacattcacattcacaagttgg
ctacacaacatccaagacattaatatctccctgtggcgatctgctgaacttgtgaaatac
gacagaagcgttttcatgaatcaaggtgaatgggagcttctttatgtcgatacccagttc
aatgagtttaaccttgaacgaggattgtctgcgggctatgcagaaatgcgcttttttctc
gtcattcgaagacgtcctttgttctatgcggttagtttgctgttgcccagtatcttcctc
atggtcatggatatcattgggttttacttgcctccggacagtggagagagagtgtcattt
aaaattacccttcttctggggtattccgtttttctcatcattgtgtctgatacccttcca
gccacagccatcggcactccactgataggtgtatactttgtggtttgcatggctctgctg
gtgatcagcctgactgagaccattctaatagtgcaattggtgcacaaacaggacctccgg
tcacacgcaccagagtgggtgaagagtctgattctggacaaagccacagtcttgctctgt
ctccgcaacaagactcagttccgctccatgcgtcagcacagtgaaacatcagataacgcc
agggacagaaaggacagcatggtgcaactgaatcactttgcctgtgagaatgggacggac
tgcgagaaaccacttagctctagcttacctcaggcagacacacaccttactgtggacaac
atcttgcacgagatctcagcaattcgccaattcctggagaagagggatgagtacagagat
atcgccaaggagtggctgcaaattgggtacgttttggacgtactcctcttccgtgtctac
ctagtggctgtcctggcctacgcaatcagcttgggtactctgtggtccatttggcagtac
tcttaa
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