Rhincodon typus (whale shark): 109932243
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Entry
109932243 CDS
T06055
Name
(RefSeq) nocturnin isoform X1
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109932243
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
109932243
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109932243
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
109932243
NCBI-ProteinID:
XP_048459878
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All DBs
Position
1:complement(153993379..154022376)
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AA seq
436 aa
AA seq
DB search
MWAVMFQAPARLCATLRQRDLLQLMSGSSPAFSRQALLRKTGSASATTGTLPPAAGAPAP
GATVGAAAVCSMGTNTNRLYSALAPTVTDNGIPQPKEYDVETNLEPVDPTDPNDLLKECQ
KVLENRPPRLQRDFLLLKKSNLSAVSRPIKVLQWNILAQALGEWKDNFIKCPKEALNWSE
RKYLILEEILSYHPDILCLQEVDHYFDTFQPVLRGLGYHSTFFPKPSSPCLDVEHNNGPD
GCALFFLRERFELIDTATIRLAARMLQTNQVAIVQTLRCIETSKVFCVAVTHLKACSGWE
RFRSSQGCDLLQNLETITDGASIPIIVCGDFNAEPTEDVYKQFTKSSLNLSSAYKLLSED
GQSEPPFTTWKIRPSGESCHTLDYIWYSRNAFCVNRLLNLPTEEQIGPNRLPSFHYPSDH
LSLICEFSFLDQFDEC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggtaatgtttcaggcaccggctcggctgtgcgcgacgttacgccagcgagat
ctcctgcagctcatgtccggctcttcgcccgcgttcagtcgccaggccctgctccgtaaa
accggctcggcatcagcgacgacggggacactgccgccagcggcgggagcaccggccccg
ggtgcgacggtcggcgcggcggccgtgtgttccatgggaactaataccaacaggttgtac
agtgctctggctccaactgtaacagataatggaataccacaaccaaaggaatacgacgta
gagacaaacttagaaccagttgatccaacagaccccaatgatctcctcaaagaatgtcag
aaggtgctcgaaaaccgtccacccagactccagcgggattttttgcttttaaagaaaagt
aatctttctgctgtgtctcgtccgatcaaggtcctacaatggaacatactagcgcaagct
cttggagaatggaaggataattttattaagtgtccaaaagaagctttgaactggtcagag
cgtaaataccttatcttggaagagattctgagctaccacccagatatcttgtgtctgcaa
gaagtggatcattactttgataccttccagccagttctccgtgggttaggctatcattca
acattcttccccaaaccatcatctccttgtttggatgtagaacataacaatggaccagat
ggatgtgctttgttttttctacgggaacgatttgaattgattgacactgccacaattaga
ctagcagccaggatgttgcagaccaatcaagtggctattgtccaaaccctccggtgtatt
gaaactagcaaggtgttctgtgttgctgtgactcacctgaaggcctgcagtggttgggag
cgatttcgttcatcacaaggctgtgatttgctccagaatctagaaaccattactgatgga
gccagtattcctattattgtgtgtggagattttaatgcagagcccactgaagatgtttac
aaacagtttaccaagtccagtctaaatctgagcagtgcgtacaagctactgagtgaagat
ggacaatcagaaccccccttcacaacatggaagatacgaccctcgggcgagagctgccat
acgttggattacatttggtattcccggaatgcgttttgtgtgaatagattgctgaatttg
cctacagaggaacaaattggccctaatcgcttgccatcattccactatccctcagatcat
ttgtcgcttatttgtgaatttagctttctggatcaatttgatgaatgttga
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