Rhincodon typus (whale shark): 109932271
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Entry
109932271 CDS
T06055
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04382
Cornified envelope formation
rtp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109932271
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109932271
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109932271
Cell adhesion molecules [BR:
rtp04515
]
Cadherins
Major cadherins
109932271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_CELSR2_9th
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
109932271
NCBI-ProteinID:
XP_048452174
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All DBs
Position
4:119078104..119111637
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AA seq
1222 aa
AA seq
DB search
MSFFLIPVKFHSCHLGKHIKLSTDDANFAILSNGSLYATHALNLDSTYHFKVIAKDQKTH
KEWKARIRLIPAAKDLTNELNKVIKRKSPVVYFPKIHNSRRQKREWIIPPVSVREHEPPE
HNPIAIIRSDLEIIDKIHYTISGHGADLPPVNLFVIDRNTGELNITGMVDREINPSFVLT
GKAISTIGSEVEKQLSLVVEVLDINDNAPVFTEQVFEGAVEELSPVGTLVLRLNATDADI
GENAQIAYRILSQGANEMFLAKSNGEIRTMANTLDRETQDLYTLTVEGRDLNGKISGLSS
TANTQIRILDVNDNIPTPEKEEYEVSVEENSLNDEVTRIKVFDNDQEFTDNWLGHFDIIE
GNEGGHFRFEVDEQTNEGILVLQKELDYEKSQTRNLVLRVSNKAAYHSSVTGGGGGGGGG
GGGGGGGAVVVGNPIRIKVNVKDKKEGFLFKPTKKRLTVSEDRRKVTIGQSFGKYPAISA
DTGKESERTRYAKNSDPANFFNINPETGEITLNKLPDRESPYVVDGKYTATILAIDNEGP
VPKTATGTVVLDVDDDNDNIPLIRNLQPCMCEQAKSLLVTAHDADSYPNAAPYHFKLVDK
PGITDKWKILMKNDTSAELQPLVELWPHTFKVPIKVEDNQGSGEVQNLDVSVIECSGNDL
TCSPEKIPRIGSKNAALGAPAIGLLVLGALLLLLAPLLLLFCNCGGAGGTFTQVKDFKQI
PIEPLGYLEKTNVEGGGEVDTTSPLLPVDGSGGMASGGMASGGMAAAGMAAGGMASGGMK
VGTLSEVDGYKGRFSRETKYTVGGSEIISSGVAPAYIERFSMAGTYRPISGAAHDRRMSS
SYRGYIGSYINEKLNGCTEEDQNRPARDCLLVYNHEGDGSPVGSIDSCSFIEDEPQFKDS
YLDDLGPKFKTLADICVGKFESQTSTVSIDPLVRESFSRTETSVSSSSRGLHGLNIVADP
PRMQQKNYVVTTTINPVPEGLPGIVDLPVAHQNVIMTKQVNANAGGVPALVIDPSITHQN
VVVTKQVNTNAGGMPAMVIDPSVAHQSVIMTKQVNANPGGMPAIVVDPSITPQNVIMTKQ
VNANQGGMPAMVIDPSIAHQNVVLTKAVNVSSGGTQGMVIDPSFSQVPEVHKNVTLSRPI
SSGTRQEQNTVASSSLCQIPIIHKNVTLTRPSHSAAGGDGTGDFGTFPLVQNSSTTRKSV
TSTDGVHKTVTKVTNVTQVMQE
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttttctcattccagttaaatttcatagctgccatttgggaaagcacattaag
ttaagtactgatgatgcaaattttgcgatcctttccaatggctcattgtatgcaactcat
gctctaaaccttgactcaacatatcatttcaaagtgattgcaaaggatcaaaaaacacat
aaggaatggaaagcaagaatccgtttaatccctgcagcaaaagatttaacaaatgaattg
aataaggttatcaagaggaaatctcctgttgtctattttccgaagattcacaactcaagg
cgccaaaagagagaatggatcattccaccagtctctgtgagggaacatgagccaccagag
cacaatccaatcgctattatcaggtcagatttggaaataattgataaaatccactatact
atttctggccatggtgccgatcttccacctgtcaatttgtttgtgattgatcgcaatacc
ggagaactaaacattacaggaatggtggaccgcgagataaatccttcctttgttctaaca
ggtaaagctataagtaccatcggtagtgaagttgagaaacaattgtcacttgttgttgag
gttctggacatcaatgataatgccccagtgttcacagaacaagtctttgaaggagcggtt
gaagaattgtctccagttggaaccttagtgttaagactaaatgcaacagatgctgatatt
ggcgaaaatgcacaaattgcctatagaattctgtcacagggagccaatgaaatgtttctt
gcaaagtccaatggagaaatcagaacaatggcaaataccttagacagagagactcaggat
ctgtacaccttaacagtggaaggccgtgatttaaacggaaagatatcgggattgtcctcc
acagccaacactcagatcagaatcttggatgttaatgacaacattccaacaccggaaaag
gaggagtatgaagtctctgtggaagaaaattcactgaacgatgaggtcacccgcatcaaa
gtatttgacaatgaccaagaattcaccgacaactggctggggcactttgatattatcgaa
gggaatgaaggaggacactttaggttcgaagttgatgaacaaacaaatgaaggaatcttg
gtgcttcaaaaggaactggattacgaaaaatcacaaaccaggaatttggtacttcgagtt
tccaacaaagcagcctatcactcatcagttactggaggaggaggaggaggaggaggtgga
ggaggaggtggaggaggaggagcagtagttgtgggtaatccaatcagaatcaaagtcaat
gtgaaggacaagaaagaaggctttttgtttaaaccaacaaagaagcgactcactgtttct
gaggatcgaagaaaagttacaattggccaatcatttggaaaatatccagccattagtgct
gacactgggaaagaaagtgaacgcaccagatacgcaaagaattctgatccagcaaacttc
ttcaacattaaccctgaaaccggggagataacgctaaacaaattgcctgatcgcgagtcg
ccatatgttgttgatgggaaatacacagcgactatcctggcaatcgataatgaaggacct
gttcctaaaacagccacgggtaccgttgtccttgacgtggatgatgacaatgacaatatt
cccctcattcgcaatctccagccttgtatgtgtgaacaagcaaagtccctgcttgtcacg
gctcacgatgcagactcttatccaaatgcagctccgtatcatttcaaactcgtggataaa
ccaggcatcacagacaagtggaagattttaatgaaaaacgataccagtgcagagctgcag
cccttagtggaactctggccacacaccttcaaagtcccaatcaaggtggaagataaccag
ggctctggtgaagtccagaacctggatgttagtgtgatcgagtgttctggcaatgacctg
acatgctctcctgaaaaaatcccgcggattggatccaaaaatgctgccctcggtgcacct
gccattggcctcttggtccttggagctttgctgttactcctcgctcctctcctgctgctt
ttctgcaattgtggtggtgccggagggacttttacacaagtcaaagactttaaacagatc
cccattgaacctctgggatacctggaaaagaccaacgttgaaggaggtggcgaggtggac
acgacttctcctttgcttccagttgatggatctggtggaatggcatctggtggaatggca
tctggtgggatggcagctgctgggatggcagctggtggaatggcatctggtgggatgaaa
gtcggcacgctctctgaggttgacggctacaagggtagattttcgcgagaaacaaaatac
acagtcgggggttcggaaataatcagttcgggagtagctcctgcttatatcgagaggttt
tcaatggcagggacataccggcccatctctggagcagcccacgataggagaatgtctagc
agctacagaggttacattgggtcgtacattaatgagaaattgaatggctgcactgaagaa
gatcagaaccgtccagcccgagattgtctcctggtctacaaccatgaaggagatggctca
cctgttggttccattgatagctgcagctttatcgaggatgaaccccagtttaaggattct
tacttggatgacttgggcccgaaattcaagacattggccgacatctgtgttggtaaattt
gagagtcaaacgtcaactgtcagcatcgatcctctggtcagagaaagcttctcaaggaca
gaaacatctgtttcatccagctcaagagggcttcatggcttgaacattgtcgctgaccca
ccacgaatgcagcagaagaattatgttgtgaccacaacaattaatcctgtgcccgagggg
ttgcctggcattgtggatttgcctgtcgctcaccaaaatgtcataatgactaagcaagtt
aacgccaatgcaggaggggtgccagctttggtcattgacccatcaatcactcaccaaaat
gtggttgtcaccaaacaagtcaacaccaacgctggaggaatgccagcgatggtcattgat
ccatccgttgcccaccagagcgtcataatgaccaaacaagtcaacgccaaccctggagga
atgccagcaatagtcgttgacccatcaatcactccccaaaatgtcataatgaccaaacaa
gttaatgccaaccaaggaggtatgccagctatggtcattgacccatccattgctcaccag
aatgtcgtgctgaccaaggctgttaacgtcagctcagggggcacgcaaggaatggtcatt
gatccgtcgttcagccaggtgcccgaggtccacaaaaatgtcacactgagcaggccgatt
tcctctggcaccaggcaggagcagaacacggtggccagctcgtcgctctgtcagatcccc
atcatccacaagaacgtcactctgacaaggccgtcccacagcgctgcgggaggggacggc
accggcgatttcggcaccttcccactggtccagaatagtagcaccactcgcaaatctgtc
acatccactgacggtgtgcataaaacagtgacaaaagtgactaatgttacgcaggtaatg
caggaatag
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integrated database retrieval system
