KEGG   Rhincodon typus (whale shark): 109932308
Entry
109932308         CDS       T06055                                 
Symbol
itgb6
Name
(RefSeq) integrin beta-6 isoform X1
  KO
K06589  integrin beta 6
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04510  Focal adhesion
rtp04512  ECM-receptor interaction
rtp04518  Integrin signaling
rtp04810  Regulation of actin cytoskeleton
rtp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109932308 (itgb6)
   04518 Integrin signaling
    109932308 (itgb6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109932308 (itgb6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109932308 (itgb6)
   04810 Regulation of actin cytoskeleton
    109932308 (itgb6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109932308 (itgb6)
   04515 Cell adhesion molecules [BR:rtp04515]
    109932308 (itgb6)
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   109932308 (itgb6)
Cell adhesion molecules [BR:rtp04515]
 Integrins
  Integrin beta subunits
   109932308 (itgb6)
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt EGF_integrin Integrin_B_tail PSI_integrin EGF_2 I-EGF_1 EGF_TEN vWA_SIBA-E EGF_Teneurin
Other DBs
NCBI-GeneID: 109932308
NCBI-ProteinID: XP_020387132
LinkDB
Position
7:complement(54974649..55061983)
AA seq 833 aa
MKNLQGRRKLAKSKGEPASPWWPYLSETPSVSDLLHLPSVSDSKDMGVNLVTIVLLLAKT
LSRAKAGSCSSGSALTCEDCLRLGPLCGWCFQEDFSDDSNFGGRCDTLDNLSSRGCPREF
IESPFSDLRVVKGEPVSLSSEKRDGKRIQMSPQKLALNLRPGNQLTFGVDVRQFEDYPVD
IYYLMDLSASMIDDLNRIKELGSSLSKEMAKLTSNFKLGFGAFVDKPMSPFIKTTPKDLA
NPCWTQDTECLPTFGYRHMLSLTEDTTKFNEVVQKQQISANVDDTEGGFDAILQATVCKE
KIGWRNDSLHLLVFVTDADTHFGMDSKLAGIVIPHDGKCHLDNENRYTKSTAMEYPSLGQ
LIEKLVENNILLIFAVTDKQLNTYKNYATLIPGATVEPLASDSGNILQLIIKAYKELRSE
VELEVTGDTDGVQFYFTAICQDGTILQGQKKCSHLYIGDTVSFNVTVELKECLNEHKHIV
IKPFGFRDSLEIEIQPACSCSCQSNAEHNSSRCSNGSGSYQCGVCVCNAGRLGPHCECTE
ENINTGTCKHSAENISCNGRGDCYCGQCVCHPSEFGQIYGAYCECDDFSCVRFKGLQCAG
HGQCDCGECHCHQGWSGEYCNCTTSTDLCISEDGAICSGRGECICGKCVCTHAGPSGDKC
EKCPTCGDPCTSKRSCVECYLSNMGGSVEECEEKCMVVDSTVNQTAEFEENQSIYCSLKS
GNDCTISFRIVNDQHGRSFLYDLEQTECPLPPNVLMIVLGIALAILVVGLVILSIWKMFI
SIHDRKEVAKFEAERAKAKWQTGTNPLYRGSISTFKNVTYKNYGKKEVTTIGN
NT seq 2502 nt   +upstreamnt  +downstreamnt
atgaagaacctgcaaggaagaaggaagctggcgaaaagcaagggcgagccggcttcacca
tggtggccgtacttgagcgagactccaagtgtcagcgatctgctccacctccccagtgta
tccgattccaaagacatgggagtgaacctggtgacaatcgtgctgcttctggcaaaaaca
ttgagtcgtgcaaaagcaggttcctgctcttctggaagtgcacttacttgtgaagactgt
ttgaggcttgggccgctgtgcggttggtgcttccaggaggacttcagtgacgattcaaat
tttggtggaagatgtgacacccttgacaatctttcgtcgcgaggatgccctcgggagttt
attgagtcccctttcagcgaccttcgagttgtaaaaggcgagcctgtgagcttgagcagc
gagaagagggacgggaaaaggatacaaatgtccccacaaaaacttgcacttaacctacga
ccaggcaatcagctgacatttggagtggatgtgcggcagtttgaagattacccagtcgac
atttactacctaatggacctttctgcctctatgatcgatgacctgaacagaattaaagaa
ctgggctcctctctctccaaagaaatggccaaactgaccagtaactttaaactgggcttt
ggagcgttcgtagacaagccaatgtctcctttcatcaaaacgactccgaaggatttagcc
aatccctgctggactcaggacacagaatgtttgcctacatttggttatagacacatgctt
tcgctgactgaagacacaacaaaatttaatgaagttgttcaaaaacagcaaatttctgca
aatgtagatgacactgaaggaggatttgatgcaatattacaagcaactgtctgtaaggaa
aaaattggctggcgtaatgattccttacacttgttggtatttgtgactgatgctgatacc
cattttggaatggacagcaagttggctggaattgtcatccctcatgatggaaaatgccat
ttagacaatgagaacagatataccaagtcaacagcaatggaatatccctcacttgggcaa
ctcatagaaaagcttgtggaaaataatatcttgctgatttttgctgtgacagataagcag
ctgaatacgtacaagaattatgcaacactaatacctggtgccacagtggagccactcgca
agtgattctggaaatatccttcaattgattattaaggcctacaaggaactgcgatctgag
gtggagctggaagtgacaggagataccgatggagtgcaattctatttcactgctatctgt
caagatggtactatcctccagggacagaaaaaatgttctcacctctacattggagacaca
gtctctttcaatgtgactgtagaattgaaggaatgtctgaatgaacataagcatattgta
atcaagccctttggattcagagacagcctagagattgagatacagccagcctgtagctgc
agctgccaatcaaatgcagaacacaatagctcaagatgtagcaatggcagtggctcttac
caatgtggtgtttgtgtttgcaatgctggccgattaggtcctcattgtgaatgtacagaa
gagaacataaacacgggtacctgcaagcacagtgcagagaacatttcctgcaatggtcga
ggagactgctactgtgggcagtgtgtctgtcatccatctgaatttggacaaatatacggc
gcctattgtgaatgtgatgatttttcctgtgtgagatttaaagggcttcagtgtgcaggt
catgggcagtgtgattgtggagaatgtcactgtcaccaaggatggagtggtgaatactgt
aattgtactacaagcaccgatctttgtatttctgaagatggtgcaatatgtagtggacgc
ggagagtgcatctgtgggaaatgtgtctgcacacatgcaggaccctcgggggataaatgt
gaaaaatgtccaacttgtggtgacccctgcacttcaaaacggagctgtgttgaatgttac
ctttctaacatgggtggatcagtagaagaatgcgaagaaaaatgcatggtagttgattcc
acagtcaatcaaaccgcagaatttgaagaaaaccaatcaatctactgttctttgaaaagt
ggcaatgactgcacaatatcattccgtattgttaatgatcaacatggaagatcatttctt
tatgatcttgaacaaacagagtgccccttgcctccaaatgtactaatgatagttttggga
atagctttggcaatccttgtggtcggtttggttatcctcagtatctggaagatgtttata
tccattcacgatcgcaaagaagtggccaaatttgaagcagaacgagcaaaagctaagtgg
caaacgggtacaaatccactttacagagggtcaatttccacatttaaaaatgtgacctat
aaaaattatggaaaaaaggaagtcactactattgggaattaa

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