Rhincodon typus (whale shark): 109932452
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Entry
109932452 CDS
T06055
Name
(RefSeq) zinc finger protein PLAG1-like
KO
K19485
zinc finger protein PLAGL1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109932452
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109932452
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
zf-H2C2_2
SET
zf-C2H2_jaz
zf-C2H2_3rep
zf-C2H2_6
Zn_ribbon_PRDM4
Motif
Other DBs
NCBI-GeneID:
109932452
NCBI-ProteinID:
XP_020387210
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Position
9:89144158..89178660
Genome browser
AA seq
747 aa
AA seq
DB search
MSSDELWCVDCGKCLPGECRIHGPLIKVKDRTIPSRARLTLPHYLALRILEMPAVNKHIL
GVFAKKVIQKRTQFGPYVGQLSTSLTNSDDNRLVLQVLKDGVKYFLNTPDEESGNWMMFV
RPARNLEEQTLVAYQHRGEVYFTTVKNIQPHVELKVWYAADYAKFIEAPLVVIKQEPGLC
TSPAAIETANRWKCSSCCRAFSTFSLLESHPCSESDQGSIRGLAVTGCLGSDHRSARWKA
DISVPDGQGEWTLGLNVLQRDGQIDTDKEGQEMQKRFPCPLCKKIFLSADKLTAHSSSHS
GERPHVCSHHECAKAFISKYKLIRHMATHCTQKPHRCSHCEKMFHRKDHLKNHLQTHNPN
KTLFRCGECGKRYNTKLGYRRHLAWHTAASGDLTCGVCAREFGRSDQLLEHLKGHAGRLP
SSAREKRHACDRCERRFYTRKDVKRHTVVHTGRKDFLCQFCSQRFGRKDHLTRHTKKSHA
QELLKGRSEADRVAVPMNGASSISLKEEIASVWPDPLDEVEQKGNANMSSEFYAHPLPFS
QHTRKTRHMVPGSLGTRWSFMEMPSPILSPPAQHPPSQCIQPPRYQLNTPSFCPLHSKDQ
STKNSTRSYNLNLPGDLPGLESQSAPDKESSDIGLETLTVPLDTTDCVSTMHKDVKPLNV
NSTDISRLLGLSPPGTTGQPSGGDVALSYRQGEIGQRVGPLLDQQQTAREGGAPVASLNL
NQLQQVAPTFSSTLAPTPLPRFHQIFQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgatgagctctggtgcgtggactgtgggaaatgcctgccaggagagtgtagg
atacatggaccattgatcaaggtgaaggacaggaccattcccagccgtgccaggctgact
cttccacattaccttgccctccgaatattggagatgccagctgtcaacaaacacatcctc
ggtgtatttgctaagaaagtgatccagaagaggacacagtttggaccatacgtggggcag
ctttcaaccagtctcactaacagtgatgataacaggcttgtgttacaggttttaaaggat
ggggtgaaatatttcctgaacaccccggacgaagagtctggtaactggatgatgtttgtc
cgtcctgcaaggaacctcgaggagcaaaccctcgttgcgtaccagcaccggggagaggtg
tacttcaccactgtaaagaatatccaaccacacgtggagctgaaagtctggtatgcagca
gattacgccaaattcatagaagctcctttggtggttatcaaacaggagcctgggctctgc
acatctcctgctgcaatagagactgccaaccggtggaaatgctccagctgctgccgtgcg
ttcagcaccttcagtttgctggagtcgcatccctgcagcgagtcagaccaaggtagcata
cggggattggctgtcactgggtgcctggggtcagatcacaggtccgctcgctggaaagca
gacatttctgtccctgatggtcagggcgagtggacgctgggtctgaatgtgctgcagcga
gacggacagatagacacagacaaggagggacaagaaatgcagaagcgcttcccctgtcca
ttgtgtaagaagatcttcctcagtgctgacaagctgaccgctcactccagttctcacagc
ggagaacgtccacatgtctgctcacatcatgagtgtgcgaaagctttcatctccaaatac
aaactgatcagacacatggccactcactgtactcagaagcctcaccgatgttcacactgt
gagaagatgttccatcggaaggaccacctcaagaaccatcttcagacccacaaccccaac
aagactctcttcaggtgtggcgagtgcggcaagaggtacaacaccaagctgggttatagg
cggcacctggcatggcacacggccgccagcggtgacctgacatgcggagtgtgtgcccgt
gagtttgggcggtcagaccagctcctggaacacctgaagggtcatgcgggcagactgccc
agcagtgcccgggagaagcggcatgcgtgcgatcgctgtgagcgccgtttctacacccgc
aaggacgtcaagcggcacacggtggtccacacggggcgcaaggacttcctctgccaattc
tgttcacagcgcttcggccgaaaggaccacttgacccggcacaccaagaaaagccatgcc
caggagctgctgaaggggcggtcagaggctgacagggtggcggtaccaatgaatggtgcc
tcctccatctccttaaaggaggagattgccagtgtctggcctgatcctcttgatgaggtg
gagcagaagggcaatgccaacatgagtagtgaattctacgcccatccgttaccattcagc
cagcacacaaggaagactcgccacatggtgcccggctcactggggacaaggtggagcttc
atggagatgccatctccgatactttctcctcccgcgcagcatcctccaagccaatgtata
caacccccccgataccaactcaacactccctccttttgccccttgcacagcaaagaccag
tctacaaagaatagcacgaggagctacaatctgaatttgccaggagatctacccgggctc
gaatcccaatcagcgcccgataaggaaagctcggacattggcctggaaactttgacggtc
cccctggacaccacagactgtgtcagcaccatgcataaagacgtcaaacccttgaatgtg
aattccacggacatttcccgtttgctcggactctcgcctcctggtaccactggccagcct
tcaggtggcgatgtggcgctgtcatacaggcaaggggagattgggcagagggtcggccct
ctcctcgaccagcagcagacggctcgggaagggggcgctccggtagccagtttgaacttg
aaccagcttcaacaagtcgcgccaaccttctcctccacgctcgcaccaactccactgccc
cgctttcaccaaatctttcaataa
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