KEGG   Rhincodon typus (whale shark): 109932563
Entry
109932563         CDS       T06055                                 
Symbol
sdha
Name
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp00020  Citrate cycle (TCA cycle)
rtp00190  Oxidative phosphorylation
rtp01100  Metabolic pathways
rtp01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    109932563 (sdha)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    109932563 (sdha)
Enzymes [BR:rtp01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     109932563 (sdha)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 GIDA Thi4 DAO FAD_binding_3 Lycopene_cycl BAMBI_C HI0933_like
Other DBs
NCBI-GeneID: 109932563
NCBI-ProteinID: XP_020387306
LinkDB
Position
4:9770530..9802799
AA seq 665 aa
MAARCLVSALANRRLRVGFRQIPAVYQTAARRFHFAVNGKHNKNANKVSNAISTQYPVVD
HEFDAVVVGAGGAGLRAAFGLSEAGFNTACITKLFPTRSHTVAAQGGINAALGNMESDDW
RWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVIELENYGMPFSRTEAGKIYQRAFGGQSLQ
YGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCM
EDGSIHRFRANNTVLATGGYGRTYFSCTSAHTSTGDGSAMVTRAGLPNQDLEFVQFHPTG
IYGAGCLITEGCRGEGGILINREGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGCGP
DKDHVYLQLHHLPPEQLAMRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGVPTNYKG
QVINHTNGKDAMVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALTIAETCKPGE
AVAPIKPNAGEESVANLDKLRFADGSTRTSELRINMQKCMQTHAAVFRTGSVLKEGCDKL
SNLYRSLDDIKTFDRGIVWNSDLIETLELQNLMLCAIQTIYSAEARKESRGAHAREDFKI
RIDEYDFSKPLEDQEKKSFDEHWRKHTLSYVDPKTGKVTLEYRPVIDTTLDAKDCATVPP
AIRSY
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggcggcgcgttgcttggtgtccgctttggcgaatcgccggcttagggtgggcttcagg
cagattccagcagtgtaccaaactgcagctcgcagattccactttgctgtcaatgggaaa
cataacaaaaatgccaacaaagtttcaaatgcaatttctactcagtatccagtggttgat
catgaattcgatgcagtggttgttggagcaggtggtgctggtttgcgagcagcttttggt
ttatctgaagctggtttcaacactgcttgtattacaaaactctttcctaccagatcgcac
acagttgctgctcagggtggaataaatgctgcactgggtaatatggagagtgatgattgg
aggtggcatttttacgatactgttaagggatctgattggctgggagatcaagatgcaatc
cactatatgaccgaacaggcaccagctgccgtgattgagctggaaaattatggaatgcct
ttcagtaggactgaggcaggcaagatctatcaacgtgcatttggtgggcaaagcctgcaa
tatggaaaagggggacaggctcaccgctgctgttgtgttgcagaccggacaggacactct
ttactgcatactctatatggcagatcactgcggtatgataccagctattttgttgaatac
tttgccttggatctcctgatggagaatggagaatgtcgaggtgtcatcgcattgtgtatg
gaagacggttctattcaccggtttagagccaataatactgtgcttgctactggtggatat
ggaagaacttacttcagttgtacttcagctcatacgagtactggagatggaagtgccatg
gtcactcgagctgggttacctaatcaggatttagagtttgtccagtttcaccccacagga
atttatggtgctggttgtctcatcactgaaggatgtcgtggtgaaggtggaatcctcatc
aaccgtgagggagagagattcatggaacgatatgctcctgttgcaaaagatcttgcttca
agagatgtggtttcacgatctatgaccattgaaattcgtgaaggacgaggttgtggccct
gataaagatcatgtctacttacaactgcaccacctgccgcctgagcagcttgcgatgcgg
ctgcctggaatttcagaaacggctatgatttttgctggtgtggatgttaccaaagagcct
attccagtcctacctacagttcattataatatgggaggtgtccccaccaactataaaggc
caggtgattaaccacacaaatggtaaagatgccatggtacctggcctctatgcctgtggt
gaagctgcatgtgcttcagttcacggagctaatcgacttggagcaaattctctccttgac
ttagtggtgtttggtcgtgcctgtgccctgaccattgcagaaacctgcaaaccgggagaa
gctgttgcaccaattaaaccaaatgctggagaggagtcagtagccaaccttgacaagctg
cgatttgctgatggaagtactcgtacatctgagctcagaattaacatgcagaagtgcatg
caaactcacgcagctgtgttccgtacaggctctgtactaaaagaaggttgtgacaagtta
agcaatttatacaggtctctggatgacatcaaaacatttgacagaggtattgtttggaac
tctgacctaattgagaccctggagctgcagaatttgatgctttgtgccatacaaactatc
tacagtgcagaggctcgcaaagagagcaggggagcacatgccagagaggatttcaagatt
agaattgatgagtatgacttttcaaagccattggaggaccaagagaagaaatcgtttgat
gaacattggagaaagcacacactctcttacgtggatcccaagactggaaaggttacactc
gaatacagacctgtaattgacacaacattggatgcaaaagactgtgccacggttccacca
gcaattcgttcttattaa

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