Rhincodon typus (whale shark): 109932574
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Entry
109932574 CDS
T06055
Symbol
gabra2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109932574 (gabra2a)
04082 Neuroactive ligand signaling
109932574 (gabra2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109932574 (gabra2a)
Ion channels [BR:
rtp04040
]
Ligand-gated channels
GABA-A
109932574 (gabra2a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
109932574
NCBI-ProteinID:
XP_048453982
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All DBs
Position
1:80298189..80500463
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AA seq
468 aa
AA seq
DB search
MKRNLTMNKFLPSALLSLALVVSWLAGRGEPGSVEDEARDNITIFTRILDRLLDGYDNRL
RPGLGDSCGMIQEIERITEVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFKGPM
NILRLNNLMASKIWTPDTFFYNGKKSVAHNMTMPNKLLRIQDDGKLLYTMRLTVQAECPM
HLEDFPMDAHACPLKFGSYAYTSTEVNYNWTNEPAKSVVVAEDGSRLNQYDLLGQTVGEE
LVQSSTGEYKVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVT
TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKS
VVNDKKKDKASVMKKNNAYAVAVANYAPNITKDSALPTIAKSATAEPKEAKPETKPQEAK
KTFNSVSKIDRMSRIMFPVLFGTFNLVYWATYLNRETVVKEMSDGAAK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaatctgaccatgaacaaatttctgccttcagcgcttcttagtctggcgttg
gtggtctcttggctagcaggaagaggggagcctggctcagtggaagatgaagcaagggac
aacattactatctttacaagaattcttgacagactcttggacggctatgacaatcggttg
agaccaggattaggagactcctgtggaatgattcaggaaatagaaagaataacagaagtc
aagacagacatctacgtgacaagttttggacctgtatcagacacagacatggagtacaca
atcgatgtgttctttcgacaaagttggaaagatgaaagactaaaatttaagggtccaatg
aacattcttcgattgaacaacctgatggccagtaagatatggacaccagacacattcttt
tataatggcaagaagtcagtggcacataacatgaccatgccaaacaaactgctacgaatc
caagatgatgggaagcttctatacacaatgaggcttactgtccaagcagaatgtccaatg
cacttggaggattttccaatggatgcacatgcttgtcccttgaaatttgggagctatgcg
tatacaagcacggaggtgaattacaactggaccaatgaaccagcaaaatctgtggtcgtt
gcagaagatggctctcgtctgaatcagtatgatttactcggacaaactgtgggtgaagag
ctcgtccagtctagtacaggtgaatacaaagttatgacaacgtattttcacctgaagaga
aaaattggctattttgtgatccagacctacctgccgtgtatcatgactgtcattctttca
caagtgtcattttggttgaatagagaatcagtgcctgcaaggactgtctttggagttaca
acagtgcttacaatgacaactctgagcatcagtgctcgaaactcgctccctaaagttgca
tatgcaactgccatggattggtttattgctgtctgctacgcctttgtgttctctgcatta
atagaatttgccacagtgaattattttacaaaacgaggctgggcttgggatggcaaaagt
gttgtgaatgataagaagaaagacaaggcttctgtcatgaagaaaaataatgcttatgca
gtggcagttgccaattacgcaccaaacatcaccaaggactcagcactaccaacaattgca
aagagtgcaactgcagagccaaaagaagccaaaccagagaccaagccccaagaggccaag
aaaacatttaacagcgtaagcaaaatcgacagaatgtccaggataatgttccctgtttta
tttggaactttcaatttagtgtactgggccacatatttaaacagagaaactgttgttaaa
gagatgagtgatggtgcagcaaagtaa
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