KEGG   Rhincodon typus (whale shark): 109932604
Entry
109932604         CDS       T06055                                 
Symbol
wnt5a
Name
(RefSeq) protein Wnt-5a isoform X1
  KO
K00444  wingless-type MMTV integration site family, member 5
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04150  mTOR signaling pathway
rtp04310  Wnt signaling pathway
rtp04916  Melanogenesis
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    109932604 (wnt5a)
   04150 mTOR signaling pathway
    109932604 (wnt5a)
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    109932604 (wnt5a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:rtp00536]
    109932604 (wnt5a)
Glycosaminoglycan binding proteins [BR:rtp00536]
 Heparan sulfate / Heparin
  Morphogens
   109932604 (wnt5a)
SSDB
Motif
Pfam: wnt DUF6973
Other DBs
NCBI-GeneID: 109932604
NCBI-ProteinID: XP_048462550
LinkDB
Position
16:complement(27904756..27938073)
AA seq 396 aa
MFWSIILEVTGSLLLGERSESGGETVQGAVYSALKSAMAWRYLLVTATLLSGCKQVLVEA
SSWWSLAMNPIQIPEVYIIGAQPLCSQLAGLSQGQKKLCQLYRDHMQYIGEGAKTGIKEC
QHQFRHRRWNCSTVDNTSVFGRVMQIGSRETAFTYGISAAGVVHAISRACREGELATCGC
SRAARPKDLPRDWLWGGCGDNVEYGYRFAKEFVDAREREKIYQKGTYDSARTFMNLHNNE
AGRRMVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDALKEKYDSATAMRLNGRGKL
VQVNSRFNPPTALDLVYVDQSPDYCVRNESTGSLGTQGRLCNKTSEGMDGCALMCCGRGY
DQFKTVRTERCHCKFHWCCYVKCKKCTEVVDQFVCK
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgttctggagcattatactagaagtgacaggatctctgctgttgggggagcgttcggaa
agtggaggggagacagtgcaaggagcggtttactcagctttgaaaagtgccatggcctgg
aggtatctgttggttactgccacactcttatcgggctgcaaacaggtcctggtagaagca
agctcctggtggtctttagccatgaatcccattcaaataccagaggtgtacattatagga
gcccagcctttgtgtagccaactggctgggctttctcaaggccaaaagaagctttgccag
ttgtaccgggatcacatgcagtacattggagagggtgctaaaactggcatcaaggaatgc
caacatcaattcagacaccgacggtggaattgcagcactgttgataacacatccgtcttc
ggcagggtcatgcagataggaagccgggagactgcattcacctatgggatctcagctgct
ggagtggtgcatgcaatcagccgtgcttgtcgtgaaggggagctggctacgtgtggctgc
agtcgtgctgcacggcccaaggatttaccacgtgattggctatggggtggctgtggagat
aacgtagaatatggctaccggtttgcaaaggagtttgtggatgccagggagagggagaag
atctatcagaaaggaacgtatgatagtgccaggacattcatgaatctgcataacaatgag
gctggaagaaggatggtctataacctggcggatgtggcctgcaagtgccacggggtgtcg
ggttcttgcagcctgaagacctgctggttacagttagctgacttccgcaaagtgggcgat
gcgctcaaggagaaatacgacagtgccaccgccatgaggctgaatggccgcggcaaactg
gttcaggtgaacagccgcttcaacccgcccaccgctctggacctggtctatgtcgaccag
agccccgactactgtgtccgcaacgaaagcaccggctccctgggcacgcaaggccgcctg
tgcaacaagacctccgagggcatggacggctgtgcgctgatgtgttgtggccggggttat
gaccaattcaagacggttcgcaccgagcgctgccactgtaaattccactggtgctgctat
gtcaagtgcaaaaagtgcacagaggtggtcgatcagtttgtctgcaaataa

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