Rhincodon typus (whale shark): 109932604
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Entry
109932604 CDS
T06055
Symbol
wnt5a
Name
(RefSeq) protein Wnt-5a isoform X1
KO
K00444
wingless-type MMTV integration site family, member 5
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04150
mTOR signaling pathway
rtp04310
Wnt signaling pathway
rtp04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109932604 (wnt5a)
04150 mTOR signaling pathway
109932604 (wnt5a)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
109932604 (wnt5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109932604 (wnt5a)
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Heparan sulfate / Heparin
Morphogens
109932604 (wnt5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
wnt
DUF6973
Motif
Other DBs
NCBI-GeneID:
109932604
NCBI-ProteinID:
XP_048462550
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Position
16:complement(27904756..27938073)
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AA seq
396 aa
AA seq
DB search
MFWSIILEVTGSLLLGERSESGGETVQGAVYSALKSAMAWRYLLVTATLLSGCKQVLVEA
SSWWSLAMNPIQIPEVYIIGAQPLCSQLAGLSQGQKKLCQLYRDHMQYIGEGAKTGIKEC
QHQFRHRRWNCSTVDNTSVFGRVMQIGSRETAFTYGISAAGVVHAISRACREGELATCGC
SRAARPKDLPRDWLWGGCGDNVEYGYRFAKEFVDAREREKIYQKGTYDSARTFMNLHNNE
AGRRMVYNLADVACKCHGVSGSCSLKTCWLQLADFRKVGDALKEKYDSATAMRLNGRGKL
VQVNSRFNPPTALDLVYVDQSPDYCVRNESTGSLGTQGRLCNKTSEGMDGCALMCCGRGY
DQFKTVRTERCHCKFHWCCYVKCKKCTEVVDQFVCK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgttctggagcattatactagaagtgacaggatctctgctgttgggggagcgttcggaa
agtggaggggagacagtgcaaggagcggtttactcagctttgaaaagtgccatggcctgg
aggtatctgttggttactgccacactcttatcgggctgcaaacaggtcctggtagaagca
agctcctggtggtctttagccatgaatcccattcaaataccagaggtgtacattatagga
gcccagcctttgtgtagccaactggctgggctttctcaaggccaaaagaagctttgccag
ttgtaccgggatcacatgcagtacattggagagggtgctaaaactggcatcaaggaatgc
caacatcaattcagacaccgacggtggaattgcagcactgttgataacacatccgtcttc
ggcagggtcatgcagataggaagccgggagactgcattcacctatgggatctcagctgct
ggagtggtgcatgcaatcagccgtgcttgtcgtgaaggggagctggctacgtgtggctgc
agtcgtgctgcacggcccaaggatttaccacgtgattggctatggggtggctgtggagat
aacgtagaatatggctaccggtttgcaaaggagtttgtggatgccagggagagggagaag
atctatcagaaaggaacgtatgatagtgccaggacattcatgaatctgcataacaatgag
gctggaagaaggatggtctataacctggcggatgtggcctgcaagtgccacggggtgtcg
ggttcttgcagcctgaagacctgctggttacagttagctgacttccgcaaagtgggcgat
gcgctcaaggagaaatacgacagtgccaccgccatgaggctgaatggccgcggcaaactg
gttcaggtgaacagccgcttcaacccgcccaccgctctggacctggtctatgtcgaccag
agccccgactactgtgtccgcaacgaaagcaccggctccctgggcacgcaaggccgcctg
tgcaacaagacctccgagggcatggacggctgtgcgctgatgtgttgtggccggggttat
gaccaattcaagacggttcgcaccgagcgctgccactgtaaattccactggtgctgctat
gtcaagtgcaaaaagtgcacagaggtggtcgatcagtttgtctgcaaataa
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