Rhincodon typus (whale shark): 109932673
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Entry
109932673 CDS
T06055
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
109932673
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtp01009
]
109932673
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109932673
Protein phosphatases and associated proteins [BR:
rtp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109932673
Cell adhesion molecules [BR:
rtp04515
]
Cadherins
Protocadherins
109932673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
109932673
NCBI-ProteinID:
XP_048450140
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MEPSRRGPCCSLHIQEVLLMLFLFPGRSRGTELVYRVQEESPRGTYIGNLAADLKLSEPG
VTYNLASGAGSARFVDLNRETGELRTSAAVIDREELCPEPDPGIGGSGEPCWVRFDVLLL
PPRLFRLLKLRLRVDDINDRAPRFPASSLGLSVPENAEPGSRYPLEPAAEDPEPGLNGML
RYRLQGAGAAAFSLAQEDGALPGKPVPFLVLEVPLDREYRDRYVMELVAEDRGSPCLSGT
ATVTVSVTDINDHCPEFPESELSFSLFSNCSVGTTVTQLRARDPDLGYNAHVVYSYGERV
PGSSFRLFSLDRGSGTIRLAAPIPGDAAPSHRLTVLATGTGCAPVTATVSLTIIPVGSGP
PVLTPRYIALQAEGVLYLKETEPLRTPLAFFTVTEHRQQQPVRCYLEGAAATFRLARYRG
LQDEYLLETAQPLDYELQRRYEVAVVAENSNKLAQRVHLQIQLIDENDNPPIFSSPSVQV
FMEENNPPNSFLVKLKATDADSGDMGNITYLLGPGVPRIFAVDQFSGKLSVSTSLDREEQ
DRYRLTIRAVDGGTPSLESTATVLLTIQDVNDNSPRFINKDFNFFVPEDYPSFSEIGVIG
VMDPDAGTNGWVALSILNGSELFVIDTGKGNLMASVPLDREQQSSYILWIQATDGGEPAL
SAIAKVTVLLIDVNDNPPLVLFPQSNLSFLLVLPSTVPGSSITEVYAVDKDTGMNAVIAY
SIIGHRGPRPETFVIDAGTGNITLHEALVKNDHGLYRLLVKVSDHGYPEPLHSTVIVNLF
VNETLSNESYVENLLRKDPGIRIEESLPETRTDPFQTKLDVFPCETVLIALSILCFGLFA
LAFALACYISFRKRKHRRKKYGVTEVEIPLKKTLASYSLEKKSLNDLDL
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagccgagcaggaggggaccatgctgctccttacacatccaggaggttctgttgatg
ctgtttctattcccgggcaggagccggggcaccgagctggtttaccgagtacaagaggag
tcaccgagagggacctacatcgggaacctggccgctgacctgaagctgagtgagccggga
gtcacctataacctggcgtcgggggccgggtccgctcgcttcgtggatttgaaccgggag
acgggggaattgcggacctcagcggcggtgatagaccgggaggagctgtgcccggagccg
gatcccggtatcggggggtcgggtgaaccgtgctgggtccggtttgatgtcctgctgcta
cccccccgcctattccgccttctcaaactccggctccgggtcgatgatattaacgaccgg
gcgccgcgcttccccgcctccagcctcggactctcggtgcccgagaacgcggagcccggc
tcccgctacccgctggaaccggcggctgaggacccggagcccggcctcaacgggatgctg
cggtaccggctgcaaggggcgggcgccgccgccttctctctggcccaggaggacggggcg
ctccccggcaaacccgtacctttcctggtactggaggtgccgctagaccgggagtaccgg
gaccggtacgtgatggagctggtggcggaggaccggggcagcccgtgcctttccgggacg
gctaccgtgaccgtgtcggtgaccgacattaatgaccattgccccgaattcccggagagt
gagctcagcttcagcctgttctctaactgctcggtagggaccaccgtcacccagctccgg
gcccgggaccctgacctcggttataacgcccacgtcgtctactcttacggggagcgggtt
cccgggagctcgttccgcctcttcagcctggaccgcggctccggtaccatccgcctggcc
gcccccatcccgggagacgccgccccctcccaccggctcaccgtgctggccaccggtacc
ggctgtgctccggtcaccgccaccgtcagcctgaccatcatcccggtgggttccggtcct
cccgtgcttaccccccggtacatcgccctgcaggctgaaggcgtgctctacctgaaggag
accgagcctctccggacccctctcgcctttttcaccgtcaccgagcaccggcaacagcaa
ccggtccgctgttacctggagggagcggcggctactttccgcctggcccgttaccgtggc
ctccaggatgagtacctcctggagaccgcacagcccctggattatgagctccagcggcgc
tatgaagtggcagtggtggcggagaactccaacaagttggctcagagagtccacctccaa
atccaactgatcgacgaaaacgacaacccccccatcttcagcagcccctcggtccaggta
ttcatggaggagaacaaccccccgaacagcttcctcgtcaaactgaaagccacagatgct
gacagtggagacatggggaacatcacctacctgctcggccctggggtgcctcgcatcttt
gctgtcgatcagttcagcgggaaattgtctgtatcaaccagcttagacagagaagagcaa
gacaggtacaggctcaccatcagagctgtcgatggtgggacaccatccctggaatctacc
gccactgttctcctcaccatccaggatgtcaatgacaacagccccaggttcatcaacaaa
gacttcaatttctttgttcctgaggactacccaagttttagtgagattggtgtaattggg
gttatggatcctgatgctggaactaatggctgggtggccttgtctattcttaatggtagt
gagctatttgtgattgacacaggcaagggaaacctcatggcaagtgtccccttggacagg
gaacagcagagctcctatattctttggattcaagctacagatggaggagaacctgctctc
tctgccattgctaaagtgacagtgcttctgatagatgtcaacgataacccaccattggtc
ttgttccctcagtctaacctctcttttctcctggtcctcccgtccacggttcctgggtct
tccattactgaagtgtatgctgttgataaagacacgggaatgaatgctgtcattgcttac
agcatcattggccacagagggccccgtccagagacttttgtcattgatgcaggcaccggt
aacatcacactacatgaggctttggtgaagaatgatcatggattgtacagactgctggtc
aaagtcagtgaccacgggtatccggaaccacttcacagcacagttatagtcaaccttttt
gtcaatgaaacattaagcaacgagagctacgtagaaaatctactgaggaaagatcctggc
atcaggatagaggaaagtctaccagagacaagaactgacccttttcaaacaaaactagat
gtatttccatgcgagactgtcttgatagcactatcaattttatgctttgggctctttgcc
ttagcttttgcattggcctgctacatttcatttagaaaaaggaaacacaggagaaaaaag
tacggtgtgacagaggttgagattccactgaagaagacgctggcttcatattcattggag
aaaaagtcattgaatgatttagatctgtag
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