Rhincodon typus (whale shark): 109932692
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Entry
109932692 CDS
T06055
Name
(RefSeq) protocadherin-18-like
KO
K16499
protocadherin delta 2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109932692
Cell adhesion molecules [BR:
rtp04515
]
Cadherins
Protocadherins
109932692
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Psg1
Ly49
Syndecan
Motif
Other DBs
NCBI-GeneID:
109932692
NCBI-ProteinID:
XP_020387427
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Position
1:155511830..155519228
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AA seq
1130 aa
AA seq
DB search
MEMGKEAGERRQRTFFLALVLSVWLGQGVAAITVKYQVYEEQPVGTVIGRLSETLAAELN
PSSQRFRVMQQRVNASLLSVRERDGEVSVAERLDRERLCKPSAAACRIAFDVITLPTEHL
QLIQVEVEVLDINDHSPHFPRPAIPLEIFESASVGSRFPLDSAVDPDLGEHSLHTYTLSP
NPHFALEVRTGADGAKSADLVVVRELDRESQASYELRLVASDHGDPPRSGSSLLRISVAD
SNDNSPVFERSSYTVRLAEDSPQGSLLLDLNATDPDQGSNGRVVYSFGSHASPRVMETFR
IDPDTGHLLLLRPVDYELSQTYEIDAQAQDLGPNSIPAHCKILVQVLDVNDNPPEIAVSL
VPLGSDVASVSEAAPRDTFVAVVRVDDRDSGTNGQVTCRLQGHAGHFRILQTNEKNYMIQ
TNQTLDREKIAQYRLEVIAEDLGTPSFTTVQYLTVQVADDNDNAPQFQKSTYELFLLENN
SPGLFITLMTATDADFAENSQVTYTILESYISGSSITTYLTIDPSIGAIYALRTFDREEM
SRISFTVQARDGGTPQLTNNTTVVLTILDQNDNSPAILKPVLRNGTAEVPIPTDAGPNYL
VTTITVVDKDAGINAEFTCGILEGNQHGLFTLDPRTCDIYTNESWVLGEEKSWDLMVAVQ
DKGIPSLSTVAALKVVLAELGEEIHHDEQNSLDDSMIIIISLGVICAVLLIIMAMFATRC
NREKKDNRSYNCRVAESTYQHHPKRPSRQIHKGDITLVHTATGTLPIRSQHKATPSSSPT
LSGIDRGQMCSRQTNHSRQSLNSLVTLSSNHLPENFSLELTHTSPPVEQVSQLLSMLHQG
QYQPRPNFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGF
SDLFVTDSHRFHPAMKLCTDECKVLGHSDQCWMPPLSSGVSTDYRSNMFIPGEDTQQLQE
DDCDSSDSNEKKTSFLTFGKESQNEETEDLGTSSLLSEMNSVFQRLLPPQMDIYSECNEV
GSVSSLENKKGHLALKPAPYPQGVAAWAASTHFQNPVNNVGVAPVNHINPPTISKWLPAM
EEIPENYEEDEFDNVLSQLAPCKRESKHELIDASELVAEINKLLQDVRQS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggagatggggaaagaagcgggtgagaggcgccagcggactttcttcctggcccttgtg
ctgagcgtgtggctgggacaaggagtggccgctatcaccgtcaagtaccaagtgtacgag
gagcagccggtcggcacggtgatcgggaggctgtccgagaccctggcggctgagctcaac
ccgtcgtctcagcggttccgggtgatgcagcagcgggtgaatgcgtctctgctgtcggtg
cgggaacgggacggtgaggtgagcgtggccgagcgcctggaccgggagaggctgtgcaag
ccgagcgcggcggcgtgccgcatcgccttcgacgtgatcaccctgcccaccgagcacctg
cagctcatccaggtcgaggtcgaggtgctggacatcaacgaccactcgccccacttcccg
cgccctgctatcccgctggagatcttcgagagcgcctcggtggggtcccgcttcccgctg
gacagcgcggtggacccggacctgggcgagcactcgctccacacctacacgctcagcccg
aaccctcacttcgccctggaggtccgcaccggggccgacggcgccaagtccgccgacctg
gtggtggtccgggagttggaccgggagagccaggccagctacgaactgaggctggtcgcc
agcgaccacggagaccctccgagatcgggctcgtccttgctccgcatcagcgtggccgac
tcgaacgacaacagcccggtcttcgagcgctcctcctacaccgtccgcctggccgaggac
tcgccccaaggctcgctcctcctggacctgaacgccaccgacccggaccaaggcagcaac
gggagggtggtctactcgttcggcagccacgcgtccccccgggtgatggagaccttccgc
attgacccggacaccgggcacttgctactgctccgcccggtcgactacgagctgagccag
acctacgagatcgacgcccaggctcaggacttgggtcccaactccatcccggcccactgc
aagatcctcgtccaggtgctggacgtcaacgacaacccgcccgagatcgccgtcagcctg
gtcccgctgggcagcgacgtggcctcggtgtccgaggccgctccccgcgacaccttcgtg
gccgtggtgcgggtcgacgacagagactcgggcaccaacggccaggtgacctgccgcctc
cagggccacgccggtcacttcaggatcctgcagaccaacgagaaaaactacatgatccag
accaaccagaccctggaccgtgagaagatcgcccagtacaggctggaggtgatcgccgag
gacctgggcactccgagttttaccaccgtccagtacctcaccgtccaggtcgccgacgat
aacgacaatgccccccagttccagaaaagtacgtacgaactgttcctgctggagaacaac
tctcccgggctcttcatcaccttgatgacagccaccgacgcggactttgccgagaacagc
caggtgacctacaccattctggagtcctacatctctggcagctccatcactacctacctg
accattgatccatctattggagcaatctatgcactgaggaccttcgatcgtgaagagatg
agcaggatttcatttacggtccaggccagggatggagggacccctcagcttactaacaac
accactgttgtcctgaccattcttgaccagaacgataactcgccagccattcttaagccc
gttttgcggaatggcacggcagaagtcccaatccctactgatgctgggcccaattattta
gtgactaccataacagtggttgacaaggatgcaggcatcaatgccgagttcacttgtggc
atccttgagggaaaccaacatgggctttttactttggatccaagaacttgtgacatttat
accaatgagagctgggttttgggtgaggagaaaagttgggacctcatggtggctgtgcaa
gacaaaggaatcccaagtctgagcacagtggctgccctaaaagttgtgctggctgaactt
ggagaagaaatccaccatgatgagcagaatagtttagatgactctatgatcatcatcata
tcactgggtgtaatttgtgctgttttgcttatcatcatggcaatgtttgccacaagatgc
aatcgcgaaaagaaggacaacagatcttacaactgccgagtggcagaatccacctatcag
caccaccccaagcgaccatccaggcagattcacaaaggtgacatcactctggtgcacacg
gcaactggcactcttcccatcagatcgcagcataaggccactccttcctcttcgccaact
ctctcaggaatagatcggggtcagatgtgcagcagacaaaccaatcatagccgccagtct
ctcaacagcttggtgactttatcctccaaccatttacctgaaaacttttcattggagctt
acacatacttctccacctgttgagcaagtttctcagctgctgagcatgctacatcaaggc
cagtatcaaccaagaccaaactttcgaggaaataaatattccagaagttacagatatgct
cttcaagatatggacaaattcagtctgaaggatagtggtaggggtgacagtgaagctgga
gatagtgactatgatttgggcagagattctcccatcgatagacttctaggggaaggtttc
agtgatctctttgtcacggacagtcatcgatttcatccagcaatgaagttgtgcacagat
gaatgcaaagtattgggccactctgatcaatgctggatgccacctctgtcttcaggtgtt
tctactgattaccggagcaacatgtttattcctggtgaggatacgcaacagcttcaagaa
gatgactgtgactcttccgattccaatgagaagaaaacaagctttttaacctttggcaaa
gagtcccagaatgaggagactgaagatcttgggacttcatccctcctgtcagaaatgaac
agtgttttccaacgattgctgcctccacaaatggacatatattcagaatgcaatgaagtt
ggcagtgtaagttctttggaaaataagaaaggacatttggcattgaagccagctccctat
ccacaaggtgtggcagcttgggcagcaagcacgcacttccagaacccagtgaacaatgtt
ggcgtagctccagttaatcatataaatccaccaaccatctctaaatggttgccagccatg
gaggaaatcccagagaattatgaagaagatgaatttgataacgttctcagccagcttgcc
ccttgtaagcgcgagagtaaacatgaacttattgatgccagtgaacttgtagcagaaatt
aacaaacttttacaagatgtccggcagagctaa
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