Rhincodon typus (whale shark): 109932881
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Entry
109932881 CDS
T06055
Name
(RefSeq) trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109932881
Membrane trafficking [BR:
rtp04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
109932881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_TPPC8_4th
Ig_TPPC8_3rd
TRAPPC-Trs85
Ig_TPPC8_2nd
Ig_TPPC8_C
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
109932881
NCBI-ProteinID:
XP_048452179
LinkDB
All DBs
Position
4:complement(119302029..119375474)
Genome browser
AA seq
1043 aa
AA seq
DB search
MEVELVLVSRKGLSRSLFTATKKWFSGSKVPEKTLTELKNASSILYPPEAPELQIRKMAD
LCFLVQHYDLAYSCYHTAKKDFLNDQAMLYAAGALEMAAASVFLQSGAQRQYPSHYMETA
IQTYKDLCKNLVLAERCTLLSAEILKSQAKYSEAATLLIRMTSEDSDLRSALLLEQAAHC
FINMRTPMVRKFAFHMILAGHRFAKADQRKHALRCYSQAMQVYKGKGWSLAEDHINFTIG
RQSFTLRQLDNAVSAFRHILINDSKQTAAQQEAFLREYLYVYKSVNQLSPDGPLPQLPLP
CINSSATRVFFGHDRRPSEGEKQAATHVSLDQEYEREASQQWKELEEQVVAVVNKGAVPL
NFQPTQYCLNSQTDNLRFPVAVVEEPVTVEVVFKNPLKVPLLLKDLSLLWKFNFRDFNKS
PEEDAKESISNEKVAHLKTSPSIATEVISEFQINGEETKVARLKLLPHQTGELHILGVVY
NLSTVQSSPTQDGMDYSPGMQIGGSYLNASNLRLGKSGSKQQAPHSLHQSSPSDPLEYFH
GLSWTEGKAPHGLSVRGRQDLEIQGPRLNNTKEEKTSVKYGSDRRLDPIITEAMPLLEVF
FINFPTGLLCGEIRKTYVEFVNVSKCPLTGLKVVCKDPDFFSFGSKTAALTPLSPTASEN
CSAYKTVVIDCACMSSAVTTSVSPTDFGMDTGNPLWVTDVPLPDSVLLPGASVQLPMWLR
GPDEEGVHEINFLFYYESTKPHSKLSHRVLRHTAIICTSRSLSVKATACRSNVLEAEGKS
DSDNLLVFLDVANINTSEAGVREFHIIQVSSGSEHWKLQKCINPAEDKDAKLGSRERAKL
CFRAIRYQNSEATSCIEGKYIFADIVLGSEQIISATTPCADFFFQSCYAARSRKMIPQTT
TGPGRPKTTDLAKLVQMCSEVDLNVIVLWKAYVVEDNKQLILEGQLHVALESIGKEASSL
PQVQEAQEMALLKFVRPEQPQLPARPSMEQLSHLIKISLHYPEYYDHPFHQKSLCIVPVT
LVLFNCCQIEVDVIIDLRHKATG
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaattggtgcttgtatccagaaaaggtctcagtcgctctttgttcactgct
acaaaaaaatggttcagtgggagtaaggtaccagagaaaaccttaactgaacttaaaaac
gccagcagtatattgtatccaccggaagctccagagctgcagataagaaaaatggccgat
ctgtgtttcttggttcaacattatgacctggcttacagctgctaccatacagcaaagaaa
gatttcctcaacgatcaagcaatgctgtatgctgcaggggcattggaaatggcagcagca
tcagtttttcttcagtcgggagcacagaggcagtatcccagccattacatggagacagct
attcagacgtacaaggatctctgcaagaacttggtacttgctgaaaggtgtactttgcta
agtgctgaaattttaaaaagtcaagccaaatattctgaggctgcaactctgcttatccgg
atgacaagtgaggattcagacctccgaagcgctctcttactggaacaagctgcccattgc
ttcatcaacatgcgaacgcctatggtacgcaagtttgcttttcatatgattctggctggg
catcggtttgctaaagcagatcagcgaaagcatgccttgcggtgttacagccaagccatg
caagtttacaaaggcaagggatggagtctggcagaggatcatattaacttcacaattggg
cgccagtcctttaccctgcgacagcttgataatgcagtgtcagccttcaggcatattttg
atcaatgacagtaagcagacagctgctcagcaggaagctttccttagggaatacctgtat
gtttacaagagtgtgaaccagttgtcacctgacggacctttaccccagcttcctctaccc
tgtattaacagctcagcaactcgggtattttttggacatgacaggcggccttctgaagga
gaaaagcaagcggccacccatgtgagtttagatcaggaatatgagcgtgaagcctctcag
caatggaaagagcttgaggagcaggtagtagctgtggtgaataaaggagcagtaccactg
aattttcagccaactcagtactgcctaaacagccagacagacaacctgcgatttcctgtg
gctgtagtggaagaaccagtcacagtcgaagttgtgttcaaaaatccattgaaggttcct
ctgctgttaaaggatctctcgctgttgtggaagtttaattttagagattttaataaaagt
ccagaggaagatgcaaaggaatcaattagcaatgaaaaagttgctcatctcaagacatcc
cctagtattgccacagaggtaataagtgaatttcaaataaatggtgaagagactaaagtg
gcaagattaaaactgcttcctcatcagacaggagagttgcacattcttggtgttgtatat
aatcttagcactgtacagtcatctcctacccaagatggaatggactacagtcctggaatg
cagataggaggcagttacctcaatgccagcaacctccgcctgggaaagtctggaagcaaa
cagcaggctcctcacagcctccatcagtccagcccttcagatccactagaatacttccat
gggctaagctggacagaaggcaaggcacctcatggattatcggtaagaggacggcaagat
ttggaaatccagggacctaggctcaataacactaaagaggagaaaacatctgttaagtat
ggatcagatcgacggctagatcccatcatcacagaagcaatgcctttgttggaggtgttc
ttcataaactttcctacgggactactttgtggagaaataagaaaaacttatgtggaattt
gtgaatgtaagcaagtgccctcttactggattgaaagttgtgtgcaaagatccagatttc
ttttcctttgggagcaaaactgcagcattgacgccactaagtccgacagcttctgaaaac
tgtagcgcctacaagacagttgtgatcgactgcgcgtgcatgtcttctgctgtgacaaca
tctgtttcccctacggacttcggaatggacacaggaaatccactttgggtaacagatgtg
ccacttcctgactctgtgttgttgcctggggcttctgtgcagctccctatgtggctgcgt
ggaccagatgaagagggagttcatgaaataaactttttattttattatgaaagtacaaaa
ccacactctaagctgagtcaccgagtactaagacacacagcgataatatgcaccagccgt
tctctaagtgtgaaagcgacagcatgtagaagtaatgtcctggaggctgaagggaagagt
gacagtgataatctgttggtgtttttggatgtagcaaatattaatacaagtgaagcaggt
gtgagggaattccacataatccaggtgtccagtggtagtgaacattggaagttgcaaaaa
tgcataaatcccgctgaagataaagatgcaaaacttggcagtcgggagagggcaaaactc
tgctttcgagcaataaggtatcagaattcagaagctacctcatgtatagaaggaaagtat
atatttgcagatatcgttctggggagcgaacaaattatcagtgcaaccactccatgtgca
gactttttctttcaaagttgctatgctgcacgatctcggaagatgataccacagacaact
acaggcccggggagaccaaaaactactgatcttgccaaattggtgcagatgtgtagtgag
gtggatctcaatgtaatagtactatggaaggcatatgttgttgaggacaataagcagctt
atattggaaggccagcttcatgttgctctggagtcaattggaaaagaagccagttctttg
cctcaagtacaggaagcacaggaaatggccctgctgaaatttgtgcgacctgaacagcca
cagctgcctgcaagaccgagcatggaacagctctcccatcttattaagatcagcctgcat
taccctgaatactatgaccatccatttcatcaaaagagtttatgtatagtacctgttact
cttgttcttttcaactgctgccagattgaagtggatgttatcattgatctacgacacaag
gccacagggtag
DBGET
integrated database retrieval system
