KEGG   Rhincodon typus (whale shark): 109932990
Entry
109932990         CDS       T06055                                 
Symbol
ell
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109932990 (ell)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rtp01009]
    109932990 (ell)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rtp03021]
    109932990 (ell)
Protein phosphatases and associated proteins [BR:rtp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109932990 (ell)
Transcription machinery [BR:rtp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     109932990 (ell)
    Little elongation complex (LEC)
     109932990 (ell)
SSDB
Motif
Pfam: ELL Occludin_ELL DUF2203
Other DBs
NCBI-GeneID: 109932990
NCBI-ProteinID: XP_048470030
LinkDB
Position
29:complement(38317359..38457066)
AA seq 611 aa
MAALKEEQSYALSCGKLTSGNNLSVLHVKLTDTALRALEAYQNCKSNLSCQPGIRFEGNQ
GRITIPRPDCPNEVRTFTFYLCNVGRDNPQCSFDCIQQYQSRFGSVLLDCLGGIQDKITV
CATDDSYQMTRERMTQAEEETRSRGAIVIKPGGRYRAKRVLCKPAPGIPDAVPQRRRPTP
VNLANAMKKNVSNVSNRPYRDRVIHLLALKPYKKPELILRLQKDGITQQDKDSLENLLQQ
VANLNVRDGTFTLKDFAYKEIQRDWPGYSDGDQQLLKRVLVRKSCQPHNATGGSGETPSS
SPKDSANSASPPQKRSLPNDFIDPLANKKPRISLLTSRVPPTLNGRLNPSNGKETGALSV
QTAAADSISSTSTLPTFVENQRPHNLSSEVSNDSSHNGQDSESQETPDRTVCPRPPHYPH
PSAPSLHIKSKKKSKKHKDKERVKDKESSEEGCGERVRDYEFLQNCKEQKKIVPQKAAGL
NGMCNSSSVPTSTSDVPDYLLKYAAIESQEQRQGYKTDFNAEYNEYRDLHSRIESITRRF
TQLDAELKQLSPGSADYKSTHDQILQEYRKIKKTNPNYSQEKYRCEYLHNKLAHIKKLIA
EYDQKQLQSWR
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaggaggagcagagttacgcgctctcctgtgggaaactcacctctggc
aacaacctctcggttcttcatgttaaactcaccgacaccgcgctgcgggccctcgaggct
taccagaactgcaagagtaatttgtcttgccagcctggaattcgctttgaaggaaaccaa
gggcggatcaccattccaaggccagattgcccaaatgaagtgcgcacattcacgttttac
ctttgtaatgtcggcagggataatccccagtgtagctttgactgtattcagcagtatcaa
tcccgctttggtagtgtgctgttagactgtcttggaggcatccaggacaaaatcactgtg
tgcgcgacagatgactcctaccaaatgaccagggagcgtatgactcaagcagaggaggag
actcgaagccgtggcgcgatagttattaaacccggaggccgatatagagctaaaagggtg
ctctgcaagccagcgcctggtatccctgatgctgttccccaaaggaggcgaccaacacca
gtgaacctggcaaatgcaatgaagaaaaacgtcagcaacgtttctaatcggccgtatcga
gaccgggttatccatttgttggctctgaagccttacaagaaaccagagttaattcttcga
ttgcagaaggatggaatcacccagcaggataaggactctttggaaaatctcctacaacag
gtggctaatctgaatgttagggatggcacctttaccctgaaagactttgcctacaaggag
atccagagagattggcctgggtactcagatggtgatcagcagttactgaagagagttctt
gttcggaaatcctgtcaaccccacaatgccacgggaggctctggggagacgccttcatcg
agtccaaaggacagtgcaaattcagcctctccgccacagaaacgatcgctacccaatgat
ttcattgatccattggccaataagaaaccaagaatatctctgttgacgagccgggttcca
ccgactttaaatggcaggttaaatccctccaatgggaaagagacgggagctctgtcagtc
cagacagctgctgccgattcaattagctccacctccaccttgccaacgtttgtggagaat
cagagacctcacaatctttcatcagaagtcagcaacgattcaagtcacaacggccaggat
tcagaaagccaggagaccccagatcgaacagtctgcccacgacccccacattatcctcat
cccagtgcaccttcactccacatcaagtcgaagaaaaaatctaaaaagcacaaagacaag
gagcgagtaaaggacaaggaaagcagcgaggaagggtgtggagagcgtgtaagagactat
gagtttcttcagaattgcaaggagcagaagaaaattgttccacagaaggctgcagggttg
aatgggatgtgcaacagctcaagtgttccaacatcgacatcagatgtgcctgattattta
ctcaaatatgcagcaattgagtcacaggagcagagacaaggttacaaaactgatttcaat
gcagagtacaatgagtaccgggacctgcattccaggatagagagcatcaccaggcggttt
acacaactggacgctgagctgaaacagctctctcctgggtctgcagactacaagagtact
catgaccagatcttacaggagtatcggaaaattaagaagacaaatcccaattacagccag
gagaaatatcgctgtgaatacctacacaacaaactggctcacattaagaaattgatagca
gaatacgaccagaagcagctgcaatcctggcgttag

DBGET integrated database retrieval system