Rhincodon typus (whale shark): 109933155
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Entry
109933155 CDS
T06055
Name
(RefSeq) actin-related protein 3B
KO
K18584
actin-related protein 3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04144
Endocytosis
rtp04517
IgSF CAM signaling
rtp04530
Tight junction
rtp04810
Regulation of actin cytoskeleton
rtp05100
Bacterial invasion of epithelial cells
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109933155
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109933155
09144 Cellular community - eukaryotes
04530 Tight junction
109933155
09142 Cell motility
04810 Regulation of actin cytoskeleton
109933155
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109933155
05100 Bacterial invasion of epithelial cells
109933155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109933155
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109933155
04147 Exosome [BR:
rtp04147
]
109933155
Membrane trafficking [BR:
rtp04131
]
Others
Actin-binding proteins
Arp2/3 complex
109933155
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
109933155
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109933155
Exosomal proteins of other body fluids (saliva and urine)
109933155
Exosomal proteins of bladder cancer cells
109933155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
Robl_LC7
FtsA
ALP_N
Motif
Other DBs
NCBI-GeneID:
109933155
NCBI-ProteinID:
XP_048474587
LinkDB
All DBs
Position
2:14430587..14629925
Genome browser
AA seq
498 aa
AA seq
DB search
MTGNLPPCVIDCGTGYTKLGYAGNTEPQFIIPSCIAIKESARIGDHAQRRLVRGVDDLDF
YIGDEAVDKPTYATKWPIRHGLVEDWDLMERFMEHVIFKYLRAEPEDHHFLMTEPPLNTP
ENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQIGERTLTGIVIDSGDGVTHCIPV
AEGYVIGSCIKHIPVAGRDITFFIQQLLREREIGIPPEQSLETAKIIKERYCYICPDIVK
EFTKYDTDPGKWIKPYIGINAISKRQFSVDVGYERFLGPEIFFHPEFANPDFMQPISEVV
DEVIQNCPIDVRRPLYRSLCLNHSHTQDSDTGSVYRTMAHLLHPELLWSVSSSSSSNNSI
EAASISDWTLNGGRAPAVSARPSEGLGEGAGKGALKIACLKTPDWITTSRGITHMWSEIK
INKLWSLDCKNSDGPTNSDRPERRTAIIVRELKRCQIDPAVLSEVHLADKEQLKEVKGGY
TFFWKGKAADKPRIHDKK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcaacttacctccttgtgtgattgactgtggaacaggatatacaaagcttggt
tatgcaggtaacactgaaccgcagttcatcattccttcatgtatagcaatcaaagaatca
gccaggataggtgaccatgcacagcggaggttggtgaggggagtggatgacctagacttt
tacataggtgacgaagctgtagataaaccaacgtatgccacaaagtggcccattcgacat
ggtttagttgaagactgggatctaatggaaagatttatggaacatgtgatattcaagtat
ctccgagcagaacctgaggatcatcactttttaatgacagaaccaccactcaatacacca
gaaaatcgagagtaccttgcagagatcatgttcgaatcctttaatgttccaggtctttac
attgcagtccaggctgtgctagccttagctgcttcctggacatcaaggcagattggagaa
cgcacactaacaggcatagtgatagacagtggagatggagtaacccattgtattccagtg
gccgaaggttatgtcattggaagctgcattaaacatatcccagttgcaggtcgggatatt
acgtttttcattcaacagctcttgagggaaagggaaatcgggataccacctgaacaatcc
ttggagactgcgaagatcatcaaggagagatattgttatatctgccctgatatagtaaag
gaattcactaaatacgacacagatcctgggaagtggatcaagccatacatcggtatcaat
gctatcagcaaacgacaattttctgttgatgtgggctatgaaaggttcctgggacctgaa
attttcttccatccagagtttgcaaatccggactttatgcaacctatttcagaggtagtt
gatgaagtaatacaaaactgtcccatagatgttagacgtccgttatacagaagtctttgc
ctcaaccattcccatacccaagactcggacacaggcagcgtgtaccggaccatggcccac
ctcttgcatccagaacttctctggagtgtgtcctcctcttcttccagcaacaacagtatc
gaggctgcatccatttccgactggacactaaatggagggagagcacctgcggtttctgca
aggccttctgaggggctaggggagggggctggaaaaggtgccctaaaaatagcctgcctc
aaaactcctgactggattaccacgtccagagggatcacccacatgtggtcagaaattaag
attaataaactttggagcctggactgtaagaactctgatggaccaactaacagtgaccgg
cctgagagaagaactgcgatcatagtcagagaactgaagagatgccagattgacccagct
gttctttctgaagttcaccttgcagacaaagagcaactgaaggaggtgaaaggtggttac
accttcttctggaaagggaaggcagctgataaacccagaattcatgataaaaaatga
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