Rhincodon typus (whale shark): 109933180
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Entry
109933180 CDS
T06055
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109933180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtp03016
]
109933180
03036 Chromosome and associated proteins [BR:
rtp03036
]
109933180
Transfer RNA biogenesis [BR:
rtp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
109933180
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
109933180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
109933180
NCBI-ProteinID:
XP_048456879
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Position
9:complement(69807682..69869664)
Genome browser
AA seq
1123 aa
AA seq
DB search
MVHRDKVQLKNSVMTLLSRGTHNIMVEEAYIKDALSRIVVEMIKREWPQQWPDMLNEMDK
LTAMGETQTELVMLILLRLVEDVVTFQTIPAQRRKDIQHALTQNMMQLFSFLLDILQEHT
QSYKQLKADTTQENKAKAHCRVAVATLNTLAGYVDWVALHHITADSCKLLEVLCMLLTEP
ELQLEAAECLLIAISRKGKLEDRKPLLVLFSDAAMHCILSAAQTAHGAGLVEQHYMFLKR
LCQVLTALGGQLTALWGSDKDVGQPPNFNKYLQAFLAFTNHPSQYLRSSTQIAWCSFLRH
EHVSKDPVLLEVIPQLLHATMANLLKVGFPSKSDSPSCEYSRVDFDNDEDFNAFFNSFRA
QQGETIRLSCRLSPMTGFNMASEALQYQLTAVIDVGPTMSKTGKGLCSIFSPSFVQWDAL
TFFMESVMSQLFRTMEPEQLPVADGIELLKAVLSYQTHDPLILSCILTAVSTLSPFLLHD
ATVLPQVLEKLFASATFEVVEESQAPRTRAVKNVRRHACSSILKMCRDHPELIMPVFEMF
YAHVKRLQQDERQLTQLEKCALMESLVLLSNQFKDYERQKAFLEELMAPVTNLWLSEEMQ
RVLSDPAMFLSYIGADVTPDDPIREDPAGINRSRISLCVYTILGVVKRARWPTDLEEAKA
GGFVVGFTPSGSPIYRNACTEHVIKLLDNLLALIRTHNNLWLPEMLAQLSPHFTKAHDML
EVEKNAILGIPQPLLDHADAPVYKSVLERMQGFFCTLYDNCFHILGNAGPSMLQDFFDIT
NFAESVINSAFVNLENIPDYRLRPVLRVFVKPLVQSCPPEHYESVLCPILGPLFSYLLQR
LSAKWVVINQRGLLEAESGAPEENPESQEMLDEQLTRLLTRESIDLMTVCCCVKKGPESI
SGDMDVDDEMMNTSDGPHVGSEELTDLGKCLLKSEDICKALLATAYSAITWSDTITCQRA
TLQLCWPLIKQVLSATLHSDAASWFFMSVLRGLQMHGQHEGCLAALVNLAFMIYEALRPR
YPDLKTVMQQVPQISGDALDQFDTKLLNPSSHKMGDKRRKDLFKKLLSGCIGKPLGQKFK
KEVHIKNLPTLFKKPKPQPTTPIEETNEDNVLTPLFDPRAQDM
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggtacaccgtgataaagtccaactgaagaatagtgtgatgactcttctatcccgcggt
actcataatattatggtggaagaggcttacattaaggatgcactttcccgaattgtggtc
gaaatgatcaagcgtgaatggccacagcagtggccagatatgctaaatgaaatggataaa
ctaactgccatgggggagacacaaactgagctggtgatgttgatccttctgcgcttagta
gaagatgttgtgactttccagactattcctgctcagcggcgtaaggacatacagcatgca
ttaactcaaaatatgatgcagctgttcagttttctcttggacatcttgcaagagcataca
cagagctacaaacagctgaaagcagatactactcaagaaaataaggccaaggcacactgt
cgtgttgcagtagctactctgaataccctggctggatatgtggactgggttgctttgcac
catataacagctgatagctgcaagctacttgaggttctgtgtatgttattaacggaacct
gaattgcagctcgaagcagcagaatgtctccttattgccatcagcagaaagggtaaactg
gaggatcgtaagcctctcctggtcctctttagtgatgctgctatgcactgcattttatca
gctgcacaaacagctcatggagcagggcttgtggaacaacactacatgtttctaaagagg
ctttgtcaagttcttacagcactcggtggacagctgacagcgctgtggggaagcgacaaa
gatgtcggccaacctcctaatttcaacaaatatttacaagcattcttggctttcaccaat
caccctagtcagtatttaagatcatcaactcagatagcctggtgttcgtttttaagacat
gagcatgtctctaaggaccctgtgttgctggaggtcattccacaattgttgcacgcaaca
atggctaatcttttgaaggttggatttccttccaagagtgacagcccaagttgtgaatat
tctcgtgtggattttgacaatgatgaagacttcaatgcgtttttcaattcattccgagct
caacaaggagagaccattcgactctcttgtcgtctgtcaccaatgactggattcaacatg
gcttctgaggccctgcagtatcagcttacggcagtcattgatgttggccctacaatgtct
aagaccggcaaaggtttgtgctctatcttttcaccatcttttgtgcagtgggatgcactg
accttctttatggagagtgtgatgagccagctattcagaaccatggagcctgagcaactt
ccggtggcagatggaattgagctgctaaaagctgttttaagttatcaaacccatgatccg
ctcattctatcatgcatcctaacagctgtgtccacactttctcctttccttctccatgat
gccactgtcttaccacaagtcctcgaaaagctctttgcatctgcgactttcgaagtggtc
gaggagagccaggctccaagaacaagagcagtgaaaaatgttcgtaggcatgcttgttcg
tctattctcaagatgtgcagagatcacccagaactgataatgccggtgtttgaaatgttc
tatgcccatgtcaagcgtctgcagcaagacgaacggcaacttacacagttggagaagtgt
gctttaatggaatctctggttctcctgagcaatcagttcaaggattatgagcgacagaaa
gccttcctagaggaactcatggcccctgttactaacctttggttgtctgaggagatgcag
agagtgctttcagatccagcgatgtttctttcctacattggtgccgatgtcactccagat
gatcccattagagaagatccagcaggcatcaacagatctcggatcagcttgtgtgtttac
accatacttggagttgtgaagcgggctcgctggcctactgacctggaggaggcaaaggcc
ggagggttcgtggttggattcacacccagcgggtctccgatctaccgcaacgcctgcact
gagcatgtcatcaaacttcttgacaacctgctcgccctgataaggacacataataacctt
tggctgccagagatgttggcacagctcagcccacactttacaaaagcccatgacatgctt
gaagtggaaaagaatgcgattcttggtattccacagcctttgctcgatcatgctgatgct
ccagtgtacaaatctgtgttggaacgaatgcaagggttcttctgtactttgtatgacaat
tgttttcatatccttgggaatgctggaccaagtatgcttcaggatttttttgacataacc
aattttgcagaatccgtaataaactcagcttttgtgaatctggagaatattcctgactac
aggctccgtccagtgctacgtgtatttgtgaaaccattagtccagtcctgcccacccgaa
cattatgaatctgtgttgtgcccaattcttggacctttgttctcttacttgctgcagaga
ctaagtgccaagtgggttgtcatcaatcagaggggcctgctggaggctgaaagtggtgct
cctgaggagaatcctgaatcccaagaaatgctggatgagcaactgacccgacttctcacg
cgcgaatccattgatctaatgactgtttgctgttgtgttaagaagggccctgagtccata
tcaggtgacatggatgtagatgatgaaatgatgaacacaagtgatgggccacatgttgga
tctgaagaactcactgaccttggaaaatgtctgcttaagtctgaggatatctgtaaggca
ctgttagcaactgcctacagtgcaatcacttggagtgacaccattacgtgtcagcgagca
acactccaactttgctggccattgatcaaacaggtattgtctgcaaccctgcattctgat
gcagccagttggttctttatgagcgtgcttagaggactgcaaatgcatggacaacatgaa
ggatgccttgcagcactggtcaatcttgctttcatgatctatgaggcactgagaccacga
tatcccgatttaaaaacagtcatgcagcaagttcctcaaatctctggagatgctttggac
cagtttgatacaaaacttctgaacccatcatctcataaaatgggtgacaaaagaagaaag
gacctcttcaaaaaactattgtctggttgcattgggaagccacttgggcagaagttcaaa
aaagaggtgcatatcaaaaacttgcccacccttttcaagaaaccaaaaccacagcccacc
acaccaatagaagaaactaatgaagacaatgtcctaaccccactctttgacccaagagct
caggacatgtga
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