Rhincodon typus (whale shark): 109933298
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Entry
109933298 CDS
T06055
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109933298 (mindy4)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109933298 (mindy4)
Ubiquitin system [BR:
rtp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
109933298 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
109933298
NCBI-ProteinID:
XP_048472025
LinkDB
All DBs
Position
2:7718916..7892260
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AA seq
791 aa
AA seq
DB search
MDISNVEETAAALVREYLSRKGLKKTISAMDQELPRTEGSINTRNELKKVLHLESLYKQN
KAQLMPLKTMLEIITKYFLDSNENTKIMARDNFRAPAIVNQRAASVRFDSTFVNIYDLSD
EDKGGGIAFHDLNKPEACRFPNDSAGLTCMSVPSTKTLQSSLKKKDRSPGRNGCPSGGEP
GLLPVNILSSDASRAGVFPVEARGTNMESQRPRSGRIVRGMMSGPIRTVQEDTSKKRLIK
RASGSSLTLHSIESDIDSGFKGYVRQVGTSCETAACSDWLPAAGTLVDNIVDGTPTQDYP
QKKPSCLVTGSRSSQKSQDFRWYHEAADDPGAERVLERERGQVPSGQEKKLSSNFNANLP
EKSRKVKFAPDCMNIEYEARENDVKMDEDLHSRKPTMCSPENQLIERLQIADVDDDDLEE
VDEIVPVSSLRKHHIDSKPIDLSLAIQLKNLLFGSSFSCFAEEWKIQSFTFSDIPDLRYG
IVQKKGGPCGVLAAIQACVLQKLIFEDVASSSSEAMELQPTSAQRSQCLALAIADILWRA
GDRRRAVVALSTGRQQFIPAGKYKADGTIETIILNTLTNFQDLTTFLQQNVGQFEIGPFG
CILLTLSAILSRSIDLVKSDFDVPSSTLIGAHGYCTQELVNLLLTGKAVSNVFNDVVELD
SGNGNITVLKGISGRSDIGLLSLFEHYSICKVGSFLKTPKFPIWVVCSESHFSVLFCLKK
ELMSDWKFERRFDLYYYDGLANQQEEIRLTIDASEHCSLEGDDDLIPPLEHCIRTKWKGA
FVDWNGTDPIL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggatatcagcaacgtggaggagacggcggcagctctggtgagggaatatctcagccgc
aagggtttaaagaagaccatttctgccatggaccaggaacttccacgcacagagggcagt
attaacacccgaaatgagctgaaaaaagtactccatttggaatcactttataaacagaac
aaggctcaattgatgcctttaaagacaatgctcgagataatcacaaaatatttcctggac
agcaatgagaacacaaagattatggcacgggacaattttcgagcaccagctatagtaaac
caaagagcagcatcagtgcgttttgacagtaccttcgtaaatatctatgacctctctgat
gaggacaaaggtggtggtatagcgtttcatgacttgaataaaccagaggcttgcaggttc
cctaatgattctgctggtttaacctgcatgtcagtaccatctaccaagactctacagagt
tcactcaagaagaaagatagatctccaggtaggaatgggtgcccttcaggaggtgaaccg
gggctccttcctgttaacatcctttcatccgatgcttccagggctggtgtgtttcctgtg
gaagccagaggaacaaatatggagtcacagaggccccgatctggtcgcattgtacgtggt
atgatgtctggcccaattcgcacagtacaggaggatacttccaaaaagcgtctgattaaa
cgggcttcgggatctagcctgactttacattcaatagagagcgacattgatagtggcttc
aagggctatgtacgacaggtgggcacctcctgtgaaactgctgcctgttctgactggctt
cctgctgctggcacactggtggataacattgtagatggcacacccacccaggactaccca
cagaagaaaccttcctgtcttgtgacaggcagccgcagcagtcagaaatcacaagatttc
aggtggtaccatgaggcagcggatgaccctggtgcagagagggtactggagcgagaaaga
gggcaggtcccaagtgggcaggagaaaaaactctcctctaactttaatgccaacttgcct
gaaaagagtaggaaggtgaagtttgcaccagattgcatgaacattgagtacgaggcaaga
gaaaacgatgttaagatggatgaagatctacattccagaaagcccacaatgtgttctcct
gaaaatcaactgatagaacgtctgcagatagctgatgttgatgacgacgatttggaagaa
gttgatgaaattgtaccggtcagttctcttcgtaaacaccacattgactctaagcctatt
gacctgtctcttgctatacagttgaaaaatcttctttttgggtccagcttttcgtgtttt
gctgaggaatggaagatacagagtttcactttcagtgatatacctgacttaagatatggc
atcgttcagaagaagggtggtccttgtggagttctggctgcaattcaggcctgtgtcttg
caaaagctgatctttgaggacgtagctagcagtagcagtgaggccatggaactgcagcca
accagtgctcagcgatcacagtgcctcgcgttggccattgcagacatattatggcgtgct
ggggacaggagaagagcagtagttgctctgtcaacaggaagacagcagtttatcccagca
ggaaaatataaagctgatgggacaattgagacgattatactgaacactctgacaaacttc
caggacctgacaactttccttcagcaaaatgttggccagtttgaaattggaccatttggc
tgtattctactgacattgtctgcaattttgtctagatccattgacctagtaaaatctgac
tttgatgttcccagcagtacgctgattggagctcatggatactgtacacaggaacttgtg
aatctgttgttaaccggtaaagctgtctccaatgttttcaacgatgtcgtagagctggat
tctggcaatggcaacatcacagtccttaaaggaatttcaggacgcagtgacattgggttg
ttatcactgtttgagcactacagtatctgcaaggtgggatccttcttgaaaactcctaag
tttccaatctgggtggtgtgcagtgagagccacttcagtgtcttattttgcctgaagaag
gaattaatgagtgactggaaatttgagagaagatttgacctctattactacgatggcctg
gccaatcaacaggaagaaattcgacttacaatagatgcgtcagaacattgctcgttggaa
ggagatgatgatttgattccaccacttgaacattgcatcaggacaaagtggaagggagca
tttgtcgactggaatggaacggacccaattctgtga
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