Rhincodon typus (whale shark): 109933538
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Entry
109933538 CDS
T06055
Symbol
tex10
Name
(RefSeq) testis-expressed protein 10 homolog isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109933538 (tex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtp03009
]
109933538 (tex10)
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
109933538 (tex10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
MMS19_C
MMS19_N
DOP1_C
TOR1L1_N
Nuc_sug_transp
HEAT_EF3_N
HEAT_DAAF5
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
109933538
NCBI-ProteinID:
XP_048472434
LinkDB
All DBs
Position
2:complement(66621527..66719027)
Genome browser
AA seq
927 aa
AA seq
DB search
MTKKRKRQDDFQKVKLKVGKRKPKADNVTNTKFKTHAIHVPQQLKSDASLPTNHRKLNIK
DLLTQLHHYSSGIKQSALIGLKDLVSQHPSVITSHLSSILSDVAAVFTDKDPTVRSATIQ
LLNFLAPRISGDQMAPFYPLVCAHLSSAMTHIVEGIQEDALKILDILLEHYPELLTDHSS
ILLKNFLELISHQKSTKELKAGGRVSSWMLSVNPNRRITSQQWRLNVLSRLRKFLQAIVE
GSSQSVENEAIFETDDRIGSEHVTTLQVSWENYITGQQRIQLYEHSGSQPTTMIPFRLRP
SLDAEVGLFSLENLKGFVQILVPLLLECWMEASPAQLTGAIPSNLLEPEAMMLKLQVLSI
IQLLWKLMQHQDESQKLESWLRNHYLSDFKDQFIKNFPYSVLETAEHKKKDGAKKDKQTA
TFTNNADHPLALNLALCQVMVSFTSVLTVHLDTDWLEQVRKFVTESLSDGRKLTSQQLNG
MLMLVWRLVLVQCNRGSTEELLRAVYAQYQQQGLSLAVRTMLLNFFSGLYLREKTSNLQF
ARSKVLSRWLAGLPLQLAQLGSRNPLLSAQLIDVVHAAAARSNKELLQSLQSNVYRLYDP
QDGTLVLLPSEAQRSLVQLVYFLPFISSELLSCLSRCCTMGRLTSKLAISLIRILHTRSS
FGGWTSSLPESLVSDVDYFSFLFSTLTGFSGEELTWLQNSSSNPHISQSQFSSVRLYVTD
LDQFAHHWALTEVICQCLSAIPSRIQCCDILQSAICKHLVNVHLLPDSTAGSVLKAVGQL
IDPAFIPNECLLNFLAGCCYSILYFILTLERNSRGNAQKRELLWGSCLAALVRIPRLLRL
MLQSLRVTSTCQEELPVVAQILRLLLQQVQLRQHMVANAALVQQVIQDITNFKTEDFQEQ
WLIDLHYCFRLYLTTQHRNSANFAVTY
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaaagaaagcgtcaagatgactttcaaaaggtgaaacttaaagttggcaaa
agaaaaccaaaagcagacaatgtaaccaataccaaattcaaaacacatgccatccatgtt
ccacagcaactgaagagtgatgcatcattaccaacaaatcaccgtaaacttaacataaag
gatctactgacacagttgcaccattatagttcaggcatcaaacagagtgctctgattggt
ttaaaagaccttgtgtcccagcatccatcagtaatcacatctcatctctccagtattctc
agtgatgtagcagctgtgttcacagacaaagaccccaccgtaagatctgcaaccattcaa
cttttaaactttctagctcctcgaatctctggtgatcagatggcccctttttatcctttg
gtttgtgcacatctttccagtgcaatgactcacatagtagaagggatacaagaggatgcc
ttgaagattttagatattttgttggaacattaccctgaacttctcacagaccatagcagc
atcctcttgaagaattttctggagctaatttctcatcagaaatcaacgaaggaattgaaa
gctggaggaagagtatcttcctggatgctatctgtcaacccaaatcggcggattacttct
caacagtggcggctcaatgtgttgagtaggttaagaaaattcctacaggcaattgttgaa
ggttcaagccaatctgtggagaatgaagccatatttgagactgatgacaggattgggtct
gagcatgtgaccacattgcaggtcagctgggagaattacataactggacagcagcgtata
cagttgtatgaacactctggatctcaacccactactatgattccattcaggctaagacct
tctcttgatgctgaggtaggcttattctctctggaaaatctgaaagggtttgttcagata
ctcgtaccccttctgttggagtgttggatggaagcctctcctgctcagctaacaggcgct
ataccaagtaatctacttgaaccagaagccatgatgcttaagttgcaggttctcagcatc
atccaactattgtggaaactaatgcagcaccaagatgaaagtcagaaactggaatcctgg
ctacggaatcactatctctctgattttaaagatcagttcataaaaaattttccttattct
gtgttggaaacagctgaacataaaaagaaagatggagcaaagaaggacaagcaaacagca
actttcacgaacaatgcagaccatcctcttgcattgaatcttgctttatgtcaggtcatg
gtgtcattcaccagtgttttaactgtccatctggatactgactggttagagcaagttcga
aaatttgtcacagagagcttgtcagatggcaggaagttgacctctcagcaactgaatggg
atgctgatgttagtgtggagacttgtacttgtacagtgcaacagaggttccacagaagaa
ctgctgagggcagtttatgcacagtaccagcagcagggtctttcacttgcagttcgcaca
atgctgcttaatttctttagtggtctttatttgagggagaaaacatccaatcttcagttt
gctagaagcaaggtgctgtcacgttggttagctgggctgccattacagttggctcaactt
ggttcaaggaatccacttctgtcagcacaactgattgatgtggtacatgcagcagctgcc
cgttcaaacaaagagcttcttcagagccttcagagtaatgtctacaggttatatgatcca
caagatggcactctggtcctacttccgtctgaagcacaacgttctttggtgcagcttgta
tatttcttaccatttatttcgtctgagttattgtcttgcctaagtcgttgttgcactatg
ggaagattgacctccaaactagccattagtcttattcgtatactacatacaaggtcatct
tttggtggatggacttcttcacttccagaaagtctagtgagtgatgtggattacttcagc
tttctgttttctacattgacaggattttcaggagaagaattgacatggctccagaacagc
agcagtaaccctcatataagtcagtcccagttttcatcagtgcgtctttatgttacagat
cttgaccagtttgcacaccactgggccttgactgaggtgatatgtcaatgtttatcagcc
ataccttccagaatccagtgctgtgatattttacaaagtgccatctgtaagcatctggtg
aatgttcatctcttgccagacagcaccgcagggtcagtcttaaaagcagttggtcaactc
atagatccagcctttattcctaatgagtgtttgttgaatttccttgccgggtgttgctac
agcatcctttacttcatactaactttggaaaggaacagcagaggaaatgcacaaaagaga
gaattgctgtggggatcgtgccttgctgcattggtccgcataccccgcctgctgcgactg
atgctgcagagtttgagagtaactagcacctgccaggaggagcttcctgtcgttgcgcag
atccttcgtcttctgcttcaacaagtacagcttaggcagcacatggtagcaaatgcagca
cttgtgcaacaggtcatacaggacatcacgaacttcaagactgaagatttccaagagcag
tggttaattgaccttcattactgcttcagactctaccttacaacacagcacagaaattca
gctaattttgcagtaacctattga
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