Rhincodon typus (whale shark): 109933546
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Entry
109933546 CDS
T06055
Symbol
pals1a
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04519
Cadherin signaling
rtp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109933546 (pals1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109933546 (pals1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109933546 (pals1a)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
PDZ domain-containing proteins
MAGUK family proteins
109933546 (pals1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
SH3_9
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
109933546
NCBI-ProteinID:
XP_048456353
LinkDB
All DBs
Position
8:complement(64602395..64646133)
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AA seq
671 aa
AA seq
DB search
MTTSHMNGHVTEGPESEMKNIDLLSHDEPPRHREMAVDCPDDLGSRTMPVRRSAQLERIR
QQQDDMRRRREEEGKKQEFELNSSIRLKKLAQVQPKVGIDNPTFEDILEGPSNTVKVLEI
DELLSSLKHIQHSLVDSQSQDDVTLILQLVQNRDFQNAFNIHNTVAIHMHKMSPPYPVSG
NAQDLSQEVQKILTISHQKDGQELCALLASPHFEALLQAHDGVAQQEMLLEPSNNDHVYE
RVAEYGGETVKIVRIEKARDIPLGATVRNDVESVIISRIVKGGAAEKSGVLHEGDEVLEI
NGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQTKNPPAKEMVVHVKAHFDYDPSDDPYI
PCRELGLSFQKGDVLHVISQEDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQREAMKQTIE
EDKEPEKSGKLWCAKKNKKKRKKVLYNANRNDDYDNDEILTYEEMSLYHQPASRKRPIVL
IGPPNCGQNELRQKLMEREVDRFALAVPHTTRSMRDEEVNGRDYLFVSRQFFEADMATNK
FIEHGEYEKNLYGTSIDSVRQVINSGKICLLNLHTQSLRILRNSDLKPYIIFIAPPSQER
LRAMLVKEGKNPKPEDLRDIIEKAREMEQNYGHYFDAAVVNTDLEKAYQELIRLINKLDT
EPQWVPSTWLR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgactacctcacacatgaatggacatgttacagagggaccagaaagtgagatgaagaac
atagatcttttatctcatgatgagccaccaagacacagagaaatggcagtggattgtcct
gatgacttgggctcacggaccatgcctgtacgccgaagcgctcagttggaaagaattcgc
caacaacaggacgacatgcgtcgtagacgagaagaagagggaaagaagcaggagtttgaa
cttaattcttccattcgactgaaaaaactagcccaagttcaaccaaaagtgggcattgat
aaccctacatttgaggacattttagaaggacctagcaacacggttaaagttctagaaata
gatgaactgctgtcttctctaaaacacatacaacacagcctagttgacagccagagtcag
gatgatgtgactctcattttgcaactggttcagaaccgggattttcaaaatgcgttcaac
attcacaatacagtagccattcacatgcacaagatgagtccaccataccctgtgagtggc
aatgcacaggatctatcccaggaggtgcagaagattttgaccattagtcaccagaaagat
ggacaggaactctgtgctcttcttgcatcaccacactttgaagcactacttcaagcccat
gatggagtagcacagcaagaaatgttactagagccgtcaaataatgaccatgtgtatgag
agagtagctgagtatggaggagagactgtgaaaattgttcggattgagaaagcacgtgat
atcccccttggagctacggtacgtaacgatgtggaatctgtcattatcagtcgtattgtg
aagggtggtgctgcagagaagagtggtgtattgcacgaaggggatgaagtccttgaaata
aatgggattgagattcgtgggaaggatgttaatgaggtgtttgatttgctggctgatatg
catggtacactgacatttgtgttgattcccagtcaacagaccaagaatcctcctgccaaa
gagatggtggtacatgtgaaagcccattttgattacgacccctcagatgatccttatatt
ccctgtcgtgagctggggctgtctttccagaaaggagatgtgcttcatgtgataagtcaa
gaagatcccaactggtggcaagcttacagagatggagatgaagacaatcagccattagct
ggacttattccagggaaaagcttccagcaacaaagagaagccatgaaacaaaccattgag
gaagacaaagagccagagaaatcaggtaaactttggtgtgctaagaaaaataagaagaaa
cggaagaaggtgctgtacaatgcaaatcgaaatgatgactatgataacgatgagatcttg
acctatgaagaaatgtcactatatcaccaacctgcaagcagaaaaaggccaattgttttg
attggtccaccaaactgtggtcagaatgaactgaggcagaaattgatggaaagagaggtt
gatcgttttgctctagcagtacctcatacaacgcgttctatgagagatgaagaagtaaat
gggcgtgattacctttttgtgtcacggcaattttttgaagcagacatggcaactaacaaa
ttcattgaacatggagaatatgaaaagaacctgtatggcaccagtattgattcagtgaga
caagtgatcaattctggaaaaatatgcctattaaatttacatacccagtcgttgagaatt
ctacgcaattcagatttaaaaccttatataatctttattgcaccaccttcccaggagaga
ttgcgtgcaatgctggtcaaagaggggaaaaatccaaagcctgaggatctacgggatatc
atagaaaaggcaagggaaatggagcaaaactatgggcactattttgatgcagctgttgtt
aacactgacttggagaaggcgtaccaagagttaattcgcctcataaacaagcttgacaca
gagcctcaatgggttccatcaacatggcttcggtga
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