Rhincodon typus (whale shark): 109933561
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Entry
109933561 CDS
T06055
Symbol
bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109933561 (bhlhe40)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
109933561 (bhlhe40)
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
DUF5365
Oscp1
Motif
Other DBs
NCBI-GeneID:
109933561
NCBI-ProteinID:
XP_020388167
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Position
16:60964493..60968847
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AA seq
405 aa
AA seq
DB search
MDRITAGQPPPCLPKIPTFENNEMQGMEFSHMFVYKAKRGLKRGDDSKETYKLPHRLIEK
KRRDRINECIAQLKDMLPEHLKLTTLGHLEKAVVLELTLKHVKALTGLIEQQQQKILALQ
NGLQIGEQTAKATESSHEMFQSGFQMCAKEVLQFLAKHENLREVKPAHLINHLQKMGADI
HTGGCINGIGQTSTRFPEGDFRPKPLSEAEGPGKNCVPVIQRTCPASGEQSGSDTDTDSG
YGGEPDKSDSKHDLESPRGENELKHPLAERIISIKQEYEEPPVKKARMELSEEDTQITNG
DLAVGSFLGHHAPPLCVPFYLLPPSAAAAYMPMLEKCWYPTSMPVLYPGIPTSAALTGLM
SPDKLSPLLIPHRGTSPVCGSPTMDTSALIQALKQVPPLSVETKD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggacaggatcaccgctggccagccacctccttgcctgccgaaaatcccaacttttgaa
aacaacgagatgcaaggaatggaattctctcacatgtttgtttataaagccaagagggga
ttaaagagaggtgacgacagcaaggaaacgtataaattaccacaccggctgatcgaaaag
aaaagacgtgataggattaatgaatgcatagcacagttaaaggacatgctgcctgaacat
ctcaaactgacgactttgggacatttggaaaaggctgtggtacttgagctaaccttgaaa
cacgtgaaggcattgactggcctcattgaacagcaacaacagaaaatattagccctgcag
aatggtttgcaaatcggtgaacaaacagctaaggcgactgagtcaagccatgaaatgttt
cagtctggcttccagatgtgtgccaaagaggtgctgcaattcctggcaaagcatgaaaac
ctgagagaggtgaagcctgcgcatttgatcaatcatcttcagaagatgggggcagacatc
catactgggggatgcattaacgggatagggcagacctcgacacggttcccagaaggagac
ttcaggcccaagcccttgagtgaggctgaaggacctggcaaaaactgtgtgcctgtaatc
cagaggacttgtccggccagtggtgagcagagcggcagtgataccgacaccgacagcggg
tacggcggcgagcctgacaaaagtgactccaagcacgacctggagagccccaggggagag
aacgagctgaaacaccctttggcagaaagaatcatctccattaaacaagaatatgaggag
cccccagtcaagaaagctcgaatggagctgtctgaggaagacacccagatcactaatgga
gacctggctgtgggcagcttcctagggcatcacgcacctcctctgtgtgtgcctttctat
ctgctgcctccgtctgcagctgctgcatacatgcccatgctggagaaatgttggtaccca
acctcaatgccagtcttgtatcctgggataccaacatcagctgcactgactggcctgatg
agcccagataaactctcccctctcttgatccctcatcggggaacttcaccggtctgtgga
tctcccacaatggacacgtctgctctgatccaagccctgaaacaagtcccacccttgagt
gtagaaaccaaagactga
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