Rhincodon typus (whale shark): 109933836
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Entry
109933836 CDS
T06055
Name
(RefSeq) syntaxin-binding protein 1 isoform X1
KO
K15292
syntaxin-binding protein 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109933836
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109933836
Membrane trafficking [BR:
rtp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109933836
SNARE
SNARE associated proteins
Syntaxin-binding proteins
109933836
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109933836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
SGT1
YlbD_coat
FRB_dom
Motif
Other DBs
NCBI-GeneID:
109933836
NCBI-ProteinID:
XP_048469480
LinkDB
All DBs
Position
28:17183492..17236345
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AA seq
580 aa
AA seq
DB search
MNDVIKKVKKKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGVTIVEDINKRREPLPSLEAV
YLITPSEESVRALINDFKDAPSSKYRAAHVFFTDSCSDPLFNELVKSRTSKVIKTLTEIN
IAFLPYESQVYSLDVPDAFQSFYSPHKTQLRNPLMERLAEQIATLCATLKEYPAVRYRGD
YKENAMLAQLVQDKLDAYKADDPTMGEGPDKARSQLLIIDRGFDPVSPVLHELTFQAMAY
DLLPVENDVYKYETSGIGENRVKEVLLDEDDDLWITLRHKHIAEVSQEVTRSLKDFSSSK
RMATGEKTTMRDLSQMLKKMPQYQKELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAM
GTDAEGEKIKDPMRAIVPILLDNNVSTYDKIRIILLYIFLKNGITEENLNKLIQHAQIPP
EDSEIINNMAHLGIPIITDSTLRRRNKPERKERISEQTYQLSRWTPLIKDIMEDAIDDKL
DTKHYPYISARSTASFSATAVSARYGHWHKNKTPGEYRTGPRLIIFIIGGSSCSEMRCAY
EVTQANGKWEVLIGSTHILTPQKLLNSLKKMNKPDEEASS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtcatcaagaaggtgaagaagaagggtgaatggaaggtgctcgtggtggat
cagctcagcatgcgaatgctgtcgtcctgttgcaagatgactgatattatgacagagggt
gtcacaattgtggaagacataaataaaaggagagaaccgctccccagtttggaagcagtt
tacctgatcacaccctctgaagaatctgtccgtgcgctgatcaatgattttaaggatgcc
ccctcctctaagtacagggcagctcatgtcttcttcaccgactcttgttcagatccattg
tttaatgaactggtaaagtctcgtacatcaaaagttattaaaacccttactgagatcaac
attgcctttcttccatatgagtcacaggtttactcactggatgtaccagatgcattccag
agcttttacagcccccacaagacacagttgcgaaaccctctcatggaacgattagcggag
cagattgcaactctgtgtgccacactgaaagagtatcctgcggtcagatacaggggggat
tataaagaaaatgccatgcttgcacagctggtccaagataaactcgatgcatacaaagct
gatgatccaaccatgggtgaaggaccagacaaagcccgctcacagctattgataattgac
cgtggatttgaccccgtatcccctgttctccatgaattgaccttccaggcgatggcctat
gacttgctgcctgttgaaaatgacgtatacaagtatgaaacgagtggaattggagaaaat
cgggtcaaggaggtccttctggatgaggatgatgatctctggattaccctgcgtcacaag
catattgcagaagtgtcccaggaggttacgcggtccttgaaagacttttcctcgagcaag
agaatggcaactggtgagaagacaaccatgagggatctgtctcagatgctgaagaagatg
ccacagtatcagaaggaactaagcaagtattccacccatcttcaccttgctgaggattgt
atgaaacactatcagggcactgtggataaactgtgccgagttgaacaggatttggccatg
gggactgatgctgagggagagaagatcaaggatccaatgagagccattgttcccattctg
ctggacaataatgtttccacttacgataaaattcgcatcatccttctctacattttcctt
aagaatggaatcactgaggagaatctgaacaaactgattcaacatgcccagatcccaccc
gaggacagtgagatcattaacaacatggctcacttgggaatccccatcattacagattca
accttacgtcgtaggaacaagccagagcgtaaagagcgtatcagtgaacagacctatcag
ctgtctcgatggacaccactcatcaaggacatcatggaggatgccattgatgacaaattg
gacactaaacattacccatacatttctgcccgttctactgcctctttcagtgccactgca
gtcagtgcccgatatggccactggcataaaaataaaacaccaggggagtacaggacaggg
ccacgcctcatcatcttcatcattggagggagctcatgctctgagatgcgctgtgcttat
gaggtcacacaggccaatggaaagtgggaggtattaataggatcaacacacattctcact
ccccagaagttacttaactcgttaaagaaaatgaataagccagatgaagaagctagcagt
taa
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