Rhincodon typus (whale shark): 109933906
Help
Entry
109933906 CDS
T06055
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 5
KO
K08620
a disintegrin and metalloproteinase with thrombospondin motifs 5 [EC:3.4.24.-]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109933906
Peptidases and inhibitors [BR:
rtp01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
109933906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reprolysin
ADAMTS_CR_2
Reprolysin_5
Reprolysin_3
TSP_1
Reprolysin_4
TSP1_spondin
Reprolysin_2
Peptidase_M10
TSP1_ADAMTS
DUF4953
Astacin
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
109933906
NCBI-ProteinID:
XP_020388359
LinkDB
All DBs
Position
11:complement(12019646..12077443)
Genome browser
AA seq
651 aa
AA seq
DB search
MVLFTFLTVCSLLQTMVQCFALQESDLPEPGQLQLSPLHRGWQTRKGTVQKVDRIYAGDG
KVGYLVYADGERFLLDLERDETLGSPAPGSPALSPLGQAPSPRCLYRGTVNSEPESLAAF
NLCGALRGLFAVGRSRYTVSPLSGSGSTGLLPFGGAADQVPHLFTRDRFSFQSPSAEASR
CEIRSPAGQPAARIPQTRSSGRSRRSVSRLRHVELLLVADQSMSHKYGDKVRHYLLTLAS
IASKLFGHASIENPVRLAVVRIIVLTGNDQGPVISKNAASTLHNFCRWQHKQNQVDPDHA
EHYDAAILFTRENLCGHHSCDTLGMADVGTICSPERSCAIVEDDGLHAAFTVAHEIGHLL
GLSHDDSKFCEESYGLTEDKRLMSSILTSIDSSKPWSKCTSATVTEFFDDGHGDCLLDLP
QNPLRVPEELPGQNYDAVRQCKLAFGPEYTVCPGMDVCSRLWCAVIRQGQMVCMTKKLPA
VEGTPCGKGRICLHGKCVDKTKRRHYSASAHGNWGSWGSWGQCSRTCGGGVQFSRRHCNN
PAPRNNGKYCVGKRAIHRSCNVTPCPQTGKSFRHEQCEARNGYQTDAKGVKTFVEWVPKY
AGVIPADVCKLTCRAKGTGYYVVFSQKLGVTHVTLIAFPDELELSPTFRTE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtttactttcctgactgtctgcagcctgttgcaaacgatggtgcagtgtttt
gcacttcaggagtctgacctacctgagccgggtcaactccagctctctcccctgcaccgg
gggtggcagacgaggaaggggacggtgcagaaggtcgaccgcatttacgccggggatggc
aaggtcggctacttggtgtacgcggacggcgagaggttcctgctcgatttggaaagggac
gagacgctcggctcccctgccccgggaagcccagctctgtcccctctgggtcaggctccg
agcccccgctgcctgtaccggggcacggtcaactccgagccggagtcgttagccgccttc
aacctctgcggggctctgcgaggcttattcgcggtcggccgctcccgttacaccgtcagc
cctctctccggctccgggagcacggggctccttcctttcggtggcgccgcggaccaagtg
ccgcacctcttcacccgggaccgtttcagtttccagagcccgtctgcagaagccagccgc
tgtgagatccggagccccgccggtcagcccgctgcccggatcccacagacccggagctcc
ggccgctccaggcgctcggtgtcccgactccggcacgtcgagctgctgctggtggctgac
caatccatgtctcacaagtacggcgacaaggtccgccactacctgctcacactggcctcc
atcgcctccaaactgttcggccacgccagcatcgagaacccggtccgcctggccgtagtc
aggatcatagtcctcaccgggaacgaccaagggccggtgatcagcaagaacgcggcgagc
accctccacaacttctgcaggtggcaacacaagcagaaccaagtggacccggaccatgca
gaacactatgatgctgctatcctcttcacccgggagaatttgtgtggacatcattcatgt
gatactttgggaatggcagatgtcggaaccatctgctctcctgagcgcagctgtgcaatc
gttgaagacgatggcctccatgctgcatttacggtcgctcatgaaattggacatctccta
ggactgtcccatgatgattccaagttttgcgaagagtcatatggcttgactgaagacaag
cggctaatgtcttccattctgaccagcatcgactcctccaaaccatggtcaaagtgcact
tctgctacagtaacagagttctttgatgacggtcatggggattgcctccttgatctccca
cagaatcccttacgtgtacccgaggagcttccaggccagaactatgatgctgttcgtcag
tgcaagctggcttttgggccagagtacacagtgtgtccaggaatggatgtctgctcccgc
ctgtggtgtgctgtcatccgtcagggacaaatggtgtgcatgaccaagaagcttcctgct
gtggagggaacgccatgcggaaaggggaggatctgtctccatgggaaatgtgtggacaaa
accaaacggaggcattactcggcttcagctcatggaaactgggggtcatggggttcctgg
ggacagtgttcacggacgtgtggagggggtgtgcagttctcccgtcgacattgcaacaac
cctgctcccagaaacaatggcaaatactgcgtggggaaacgtgccatccatcgatcctgc
aacgtgacaccgtgcccacaaactggcaaatcttttcgacatgaacaatgtgaggcgcgg
aatgggtaccagactgatgccaaaggagtcaaaacgtttgtggaatgggttccaaagtac
gctggtgtgatccctgcggatgtctgtaaattgacttgtcgagcaaaaggaacaggatat
tatgttgtgttttctcagaagctgggtgtcacacatgtgactctgattgcattccctgac
gaactagaactatcaccaaccttcagaaccgaataa
DBGET
integrated database retrieval system
