Rhincodon typus (whale shark): 109933941
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Entry
109933941 CDS
T06055
Symbol
patj
Name
(RefSeq) inaD-like protein
KO
K06092
InaD-like protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109933941 (patj)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
Motif
Other DBs
NCBI-GeneID:
109933941
NCBI-ProteinID:
XP_048458046
LinkDB
All DBs
Position
10:39346316..39510702
Genome browser
AA seq
1337 aa
AA seq
DB search
MPEKPVTVDKQQILQAVARLQSQLREKGDSSQNEKLNILRDTITSPLFNQILTLQQSIKQ
LKEQLNRMSTNASPNIDFSQAGLLVFNADCYVNKPTLAKDTNLFPDTPIYDQPKFLHIPE
RTKDEFEKIIQSLAQGRQVEDIELNKPAMGGLGFSVVGLKNDSMGELGIFIREIQKNSIA
DRDGRLQEQDQILALNRTPLDENISHQEAIAMLQQTQGSVHLVVARGSLQRRSANSAEIP
DLSIASQLVLDPSMRGSIISTSTISRLLTILLTEIKSRLIPLNCSDTSRACPTFLINWQH
VEEIELVSDGSGLGFGIVGGKPTGVIVKTVVPGGLADRDGRLRTGDHILQIGGIDVQGMG
SEQIAQLLRNCGNRVRMVVARDACEDPSSKSSAFVPTVMPSEDHANAIAENDYDVENVEL
KRDGQSLGITVVGYVGASHGDTSGIFVKSIIPGSAAEQSGRIQVHDRIIAVDGVNIQEFT
NQEGIDALRNTGKTVNLTVARKKMDSVHGYFQKAEPDNVTPIANAVITESSICSVVGEQG
STQTKELQYQIDGSGSITKREESKSRWENLLGPEYEVMMLDLEIDIDHDIELQKYSKLLP
VPTLRFGVDLDSFDGHHCISSIVPDGPIGQTGLLQLEDEILEVNGAQLYGKSRREVFSFL
KEAAPPFTLVCCRRLFEGGKEMPVDEPSIIQSPTSQTAENAEPVIRPPSPWNSESCMSQV
DLDSEADSEANAEEDEVGELALWTSDVKLIELNKGSKGLGFSILDYQDPLDPARTVIVIR
SLVAGGVAECDGRVLPGDRLVFVNDYNLENTALGDAVQALKDASTGIVRLGICKPMVTEA
NENDNSDLSDSSATTENIKSDLEISNFVYSSNLPVPHEFEDTSFSEEELVDEPGVPLQLL
NLNHSNAASEAERFARGQWNPSSEQQEMLVDEENELHQAMYENVNEQYLNSRLEYSELTD
PTNVKTEDDQLHFLQQHNAREFNEGSLSSSTYAEGNDQGVMSKYYERTVTIVRNGLDLGL
TVKSDPRGPGAVIQHIDGEGAAGKDGELQEGDYIVAVNKESISGLNSAQMHFVFANSALT
EEITITYVPAKDMDRYKRSSALKPARTPNATILATDSRLKPTVSELPEREEGEGEETPVM
SHWEAPRRVELWREPGESLGISIVGGNKVIKRLKNGEELRGIFIKHVLDDSPAGRSKALK
TGDKIIEVSGMDLQNATHDEAVNAIKHVGNPVVFVVQSLLPTPRPCSVHQSKSGQRGEGQ
RNKLVKSFRPDRGGIPPPMRLPPPYKEPISNQLSKPEELEEVSDTDSAPNKGVESDPQTV
QLPDNKSHYWEAEELYH
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaaagcctgtaacagtcgataaacagcagattttgcaagcagtggcacgcttg
cagtctcaattgcgtgagaaaggagattcctctcaaaatgagaagctaaatattttacgt
gatacaattacaagccccctttttaatcaaatattaactcttcagcagtcgatcaaacag
cttaaggaacagctgaatcgcatgtccacaaatgcatctcctaatattgacttttcccaa
gcggggctcttggtgttcaatgcagattgttatgttaataagccaactttggccaaagat
acaaacctgtttccagatactccaatttatgaccaaccaaaattcctgcacatacctgaa
agaacaaaggatgagtttgaaaaaattattcaaagtttagctcagggaaggcaagttgaa
gatattgaattgaacaaaccggcaatgggaggtctaggattcagtgtggttggtcttaaa
aatgacagtatgggtgaacttggtatctttatacgagaaatacaaaagaatagtatagct
gacagggatggcaggttgcaagagcaagaccagatattggccttgaatcgtacaccatta
gatgagaacatttcccatcaagaagccattgcaatgcttcagcagactcaaggatctgtg
catttagtggttgccagaggatcccttcaaaggagatctgccaattcagcagaaataccg
gacttgagcatcgcttcacaattggttctagatccttccatgaggggaagcatcatctcc
acatctaccatttcaagactgcttacgattttacttactgaaataaaatcacgtcttatt
ccgctaaactgcagtgatacaagccgagcttgtccaacctttctcattaattggcagcat
gttgaagaaattgaattggtcagtgatggatcaggcttaggatttggaattgtaggagga
aagccaacaggagtaattgtgaaaacagttgtacctggaggattagctgatcgggatgga
aggcttaggactggtgatcatattctccagattggaggtattgatgtccagggaatggga
agtgaacagattgcccagttgttgagaaattgtggtaatcgagtccgaatggtagtagca
agagatgcatgtgaagatccttcttccaaatcttctgcttttgtccccactgtgatgcct
tccgaagaccatgccaatgctattgctgaaaatgattatgacgttgaaaatgttgaactc
aagagagatggacaaagccttggcattacagttgttggttatgttggtgcatcccatggt
gatacttctggtatttttgtgaaaagtataataccaggaagtgcagcagagcagagtgga
cgcattcaggttcatgacaggatcattgcagttgatggagttaatattcaggaatttaca
aatcaagaagggattgatgctttacgaaacactgggaaaactgttaatctgacagtagca
aggaaaaagatggatagtgttcatggatattttcaaaaagctgaaccagataatgtaact
cccatagcaaatgcagttatcactgaaagtagcatttgttctgtggttggggagcaggga
agtacacaaacgaaagaactgcaatatcaaattgatggatccggatctattacaaagaga
gaagaatcaaaatccagatgggaaaatttgttgggaccagagtatgaagtgatgatgctt
gatttggagattgacattgaccatgatatagaactgcagaagtactccaagctgttacca
gttcctaccctgaggtttggagtggatctggactcttttgatggacaccattgcatatca
tcaattgttcctgatgggccaatagggcaaactggattattacaactagaagatgaaatt
ttagaggtgaatggagcacagttgtatggaaaatctcggcgtgaggtgttttcctttctg
aaagaagctgctcctccgtttactttggtctgctgtcgacgactatttgaaggtggaaaa
gagatgcccgtggatgaacccagtattatacaaagtccaacatcccagactgcagaaaat
gctgagccagtgattaggccaccatctccctggaacagtgaaagttgtatgagccaggtg
gacttggattctgaagcggattctgaagcaaatgcagaagaggatgaagtcggagagtta
gctttatggacttcagatgtgaaactgattgaactgaataagggttcaaaaggtttaggt
ttcagcatcctggactaccaggatcctttagatcccgcacgcactgttattgttattcgc
tctttggtggctggtggggttgctgaatgtgatggcagggtgctacccggggatcggctc
gtctttgtgaatgactacaatctagagaatactgctttgggggacgctgttcaggctctg
aaagatgcatcgactggcatagtccgccttggcatctgcaaaccaatggtgactgaagca
aatgaaaatgacaattcagacttgagtgattcaagtgctactacagagaatataaagtct
gatttggaaatatcgaactttgtctattcctcaaacctgccagtaccacatgaattcgaa
gatacttcattttctgaagaagaactagttgatgaacctggggtgcctttacagttgttg
aatttaaatcacagcaatgctgccagtgaagctgaaaggtttgcaagaggtcagtggaat
ccaagcagtgaacagcaagaaatgttggtggatgaagagaatgagctgcatcaagcgatg
tatgaaaatgttaatgagcagtatttaaatagtcgactagaatattctgagctgacagac
ccaacaaatgtaaaaacagaggatgatcaactacattttttgcaacaacacaatgcaaga
gagttcaatgaaggctccttgtcttcatctacatatgcagaaggcaatgaccaaggggtg
atgtccaaatattatgaaagaactgtcaccatcgtgagaaatggccttgacctaggattg
actgtgaaaagtgatcccagaggacctggggcagttatccagcacattgatggagaagga
gctgctggaaaagatggagagcttcaggaaggagattatattgttgcagtgaacaaggaa
tccataagtggcctaaattctgctcagatgcattttgtctttgccaattcagccttaact
gaagaaatcacaattacttatgtgcctgcaaaagatatggatcgttacaaaagaagctct
gcattgaaaccagctagaacccctaatgctacaatattggcaacagactccaggctgaaa
cctactgtcagtgaattacctgaacgagaagaaggtgaaggggaagaaaccccagtaatg
agccactgggaggcaccacgacgggttgaactttggcgagaaccaggagagtcacttgga
atcagtattgttggtggcaataaagtaataaaacgactaaaaaacggggaggaattgaga
ggaatttttattaaacatgttttggatgacagtccagctggaagatcgaaagctctgaag
actggggacaaaataattgaggtttctggtatggacctgcagaatgccacccatgacgaa
gcagtgaatgccataaaacatgtgggaaatccagttgtttttgttgttcaaagcttattg
cctactccaaggccatgttctgtgcatcaaagcaaatctggacaaagaggagaaggacaa
aggaataaactagtaaagagttttcgtcctgatagaggtggaataccaccaccaatgcga
ctgcctccaccttacaaagagcccataagcaatcagctgtcaaaaccagaagaactggaa
gaggtctcagacactgacagtgctccaaacaaaggagttgaaagtgacccccaaactgtt
cagctacctgacaacaaatcacattattgggaggcagaggagctgtatcattga
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