Rhincodon typus (whale shark): 109933983
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Entry
109933983 CDS
T06055
Name
(RefSeq) calmodulin-binding transcription activator 1-like
KO
K21596
calmodulin-binding transcription activator
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109933983
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Other transcription factors
Others
109933983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
TIG
Ank
Ank_3
Ank_4
IQ_SCN5A_C
Ank_5
Motif
Other DBs
NCBI-GeneID:
109933983
NCBI-ProteinID:
XP_048470835
LinkDB
All DBs
Position
31:complement(14553331..15632914)
Genome browser
AA seq
1747 aa
AA seq
DB search
MPDIRLFMPQKALAGEDWTHCWGDAEKFMSCQPNDHGNSNGSHVKIFLPKKLLECLPKCS
ALPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWK
KRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQEQIMKEFGFADNINF
LTGLHFTIHGIKWTCSNGNTSAGFSVEQLVQQILDSHQTKPQPRTHNCLCTGNLGAGSSV
HHKCNSAKHRIISPKVEPRTGTYSSHPEVQNNDVSEGKNDHGHGKASSREKRNGKLAKPV
LLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSETDMADSPAITGVSSMAVASVMCSLS
QNATVFMSEVTNEAVYTMSPSAGPGQHLIASDTGAQGLVLAVNSDGHKFAFASSAATGNP
DGLSIMSAGVAEDLVLSSTLESSEKIPEASMNFDPDCFLNNPKQGQTYGGGALKNDTSSG
TSRQSPGNEGGYCFSGPLVKEIKTEDNSFEQQMSKEGFQSSSTPASISLTPGSALLSSGG
LSPSTTLEQMDFSAIDSSKDFSSGYAQNVQSPHVHQNPSPSFFLQEANKTHQLEPSTHSN
GLSDGGGPFSSSLGLANVKTESPTQAASSCNGPVQQGRMEATPSLQLLQFQANFQPIAAE
AEVPMETAAQSEGSEGLLKSAELPACSTEHYIQAEAGGNGLPILQGNMVSGLYPVAHHSL
GPSANMELNLDHFDISFSNQFSDLINDFISVEGGASTLYGHQLVTSETGAAGTLQQSEEE
RARVATFSQAEICIPCCSPQQQPQPQPQQQQQGLQLNGGENGGNSMTYMHVSEVVPAQGA
LGSLQQNGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASSNYSCLFDQISVPASLIQPGV
LRCYCPAHDTGLVTLQVAFNSQIISNSVVFEYKARALPTLPTSQHDWLSLDDNQFRMSIL
ERLEQMERRMAEMGSHQHHQQTGGGGLGGGNGGGGGNSQAQCASRVASCSFENRVVLVCE
KMMSRACWVKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRAKHADSIDLELEVDP
LNVDHFSCTPLMWACALGHTEAAVVLYKWDHRALSIPDSLGRLPLTIARSRGHVKLAEYL
EDLQREDESQLPSLPQTPRVVCSPTAKSGNDGWIGQWNSGSNSNQESQKNVSTPPTTDLR
RPRSESLQCHGNDSQRDLPASKKHKLNTEHFQSRQDKSSTPPLNLEQKITAKLSSSPRQT
SPDAIDSKKERNSPRESSQHTSEFPFLLTTGCRNVGNQTSPKWSQKEIYVSVAAQTTTGQ
PVVIRKVAGLSAGSIAHRIQQKQDISVLMLSEREMVDAELLSYKENEECFQHMDDLQANM
MSLAEQIIEATPDRIKRENFIPMEFPLSEQGDMPSVNTTLSWLASYLADVDHLPSLSQLR
SLYSEPLTPPSNASQSPASSPISEVNFEKPILPSAADWSEFLSASTSKKMENEFAQLTLS
DHEQRELYEAAKLVQTAFRKYKGRPFREQQEMAAAVIQRCYRKYKQLTWIALKYALYKKM
TLAAILIQSKFRSYYEQKKFQQSRRAAVLIQQYYRSYKEYGKMRQKQRTTAMVQQKIRSS
LLTKKQDQAARKIMRFLRRCRHSPLVDRRLYKRLLFLSIWKASDWSCSFKSSAAILNRAL
GFFVNCATLNHTSVQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWSKEELI
SQLKPMF
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacattaggctcttcatgccccagaaggcccttgcaggagaggattggactcac
tgttggggggatgctgagaaattcatgtcctgccaaccaaatgatcatgggaacagcaat
ggcagtcatgtgaaaatatttttgcccaagaagttgctcgaatgtctaccgaaatgttct
gctttaccaaaggaaaggcaccgctggaacacaaatgaggaaattgcggcttatttaata
acattcgagaaacatgaggaatggttaacaacatcccctaaaactaggccccagaatggt
tccatgatcctatacaacaggaagaaggtgaaatacagaaaggatggttactgctggaag
aaacggaaagatgggaaaactactcgggaggatcacatgaagttgaaggtgcaaggtgta
gagtgtctttatggctgctatgtccattcctctattatccccactttccatcggaggtgc
tattggcttcttcaggagcaaattatgaaagaatttggttttgccgataacataaatttc
ctgacaggactacacttcacaattcacggcatcaagtggacctgcagtaatgggaacacc
agcgctggtttctcggtggagcagctcgttcagcagatcctggacagccatcagaccaag
ccgcagcctcgcactcacaactgcctgtgcaccggcaatctgggtgccgggagcagtgtt
caccacaagtgcaacagtgccaaacaccgcatcatatcaccaaaggtggagccacgaact
ggcacctacagcagccaccctgaggtccagaacaatgatgtttccgaaggcaaaaatgac
cacggacacggcaaggcctcaagccgtgagaagcggaatgggaaattggccaagcccgtc
ctgttgcaccagaacagcaccgaggtctcctccaccaaccaggtggaggtgcccgacacc
acccagaactccccagtctccatcagcagtggcctaaacagcgaaacagacatggccgat
agtccagccatcactggtgtctccagcatggctgtggcctctgtcatgtgtagtctatct
cagaacgccactgtcttcatgtcagaggtgaccaacgaggcggtgtacaccatgtctccc
agtgcagggcctggccagcacctcattgcctcagatactggggcccaagggctggtcttg
gctgtcaattcggatgggcacaagtttgccttcgcctcctcggcagctactggcaaccct
gatggcttgtccataatgtcggcaggtgtggcagaggacttggtgctttcctccaccctg
gagagcagtgagaagatcccggaggccagcatgaactttgaccctgactgcttcctcaat
aaccccaaacaaggccaaacctatggaggaggggccctgaaaaatgacaccagcagtggc
acctcacgacagtcaccaggcaacgagggcggctactgcttcagtggacccttagtgaag
gaaatcaagactgaggataattctttcgagcagcagatgtccaaggaaggattccaaagc
agttccacccctgcgtccatctccttgactcctggttcagctttgctgtcatctgggggc
ctcagtcccagcaccacactggagcaaatggacttcagtgctattgactctagcaaggac
ttctcttcaggttatgcacagaatgtccagagcccccatgttcaccagaacccctctccc
agcttcttccttcaggaggccaacaagacccatcagctggagcccagcacacacagcaat
ggcctaagtgatggtggaggccctttcagcagcagcttgggactggccaacgtcaagacg
gagtcacccacacaggctgcatctagctgcaacggtcccgtgcagcagggacgtatggag
gccaccccctccctgcagttgctgcagttccaagctaacttccaacccattgcagccgag
gcagaggtccccatggaaacagcagctcagtcagagggaagtgagggcctcctcaagtct
gctgagctgccagcctgcagcaccgagcactacatccaggcagaggccgggggcaacggg
ctgcccatcctccagggaaacatggtatcaggactgtacccagtggcccatcacagcctt
gggccctcggccaacatggagctcaacctggaccactttgatatctccttcagcaaccag
ttctcggacctgattaatgacttcatatcagtggagggtggcgccagcacactgtacggg
caccagctggtgactagcgagacgggtgctgcgggcactctgcagcagtcagaagaagag
agagctagagtggccaccttcagccaagctgagatctgtatcccttgctgcagcccccag
cagcagccacagccacagccacagcagcagcagcagggtctgcagctcaatggaggggag
aatgggggcaactccatgacctacatgcacgtgtctgaggtggtcccagcccagggggca
ctggggtccttgcaacagaatggacgcttgttcatggtgacggattattcccctgagtgg
tcttaccctgagggaggagtgaaggtgctgatcacgggaccttggcaggaagccagcagt
aattacagttgtctgtttgaccagatttcagtgcctgcatctcttattcagcccggtgtt
cttagatgttattgcccagcccatgacactggcctcgtgacactgcaggtggccttcaac
agtcaaatcatctccaattccgttgtttttgagtacaaagccagggctttgccaactctt
cccacgtcccagcatgactggttgtcattggatgacaaccagttcaggatgtccatcttg
gaacgcctggagcagatggagaggcgaatggcagagatgggatctcaccagcaccaccaa
caaactggagggggaggattaggaggaggaaacggaggagggggtggcaacagccaggca
cagtgtgcatccagggtggccagctgctcctttgagaaccgtgtggtgctggtgtgtgag
aagatgatgagtcgcgcctgttgggtcaaatccaaacacctcatccattccaagactttc
cgaggaatgactctcctgcacctggcagctgcccagggttatgccacactgatccagaca
ctcatcaaatggcgtgcaaaacatgcagatagtattgatctggagctggaggtagatcca
ttaaatgttgatcatttctcctgcacacccctgatgtgggcttgtgcattggggcatact
gaagcagctgttgttctgtacaagtgggaccaccgagctctctccatccctgattcactg
ggtcgtttgcccctgacaatcgcccgctcaagagggcatgtgaaactagcagagtatctg
gaagatttacagagggaagatgaatcacagctccctagccttccccaaacacctagagtg
gtttgctctcccactgcgaagtcaggaaatgatggctggattggacagtggaacagtggc
agtaatagcaatcaggaatcccagaagaatgtcagcacacctcctaccacagatctgagg
cggccgagatcggaatccttgcagtgccacggcaatgacagccaaagggacctcccagct
tccaagaaacacaagctaaatacagaacacttccaatccaggcaagacaaatcatctacc
ccaccactgaatctggagcagaagatcacagctaaactgagctccagcccaaggcaaaca
tctcccgatgcaattgattccaagaaagagaggaatagtcccagggaatcttctcaacat
acctcagaattccctttcctcctcaccactggatgcaggaatgtcggaaaccagaccagt
ccaaagtggagccagaaggagatttatgtcagtgtggcagcgcagactacaacgggtcag
cctgtggtgataagaaaggttgcgggtctcagcgctgggtccattgctcacaggatacag
cagaagcaagacatcagtgttctaatgttatcagaaagggagatggtggatgcagaactg
ctatcatacaaggagaatgaggaatgtttccaacatatggatgatttgcaggctaatatg
atgtctttggctgaacagatcattgaagctacaccagaccggatcaaacgagagaatttc
atccctatggaatttccattgtctgagcaaggggacatgcccagtgtgaacaccaccttg
agctggttggccagttacctggcagatgtggaccatttgcccagcttatctcagcttcgg
tctttgtacagcgagcccctgacacctccatctaatgcaagccaaagcccggcctcgtca
ccaatcagcgaggttaattttgagaaacccattctcccttcagcagccgattggtctgag
ttcctgagtgcgtcaaccagtaaaaaaatggagaatgaatttgcccagctgaccttgtca
gaccatgaacagagagagctgtatgaggctgccaagttggtgcaaaccgccttccggaaa
tacaagggtcgtcctttcagggaacaacaagaaatggctgctgctgtcattcagcgctgc
tacagaaaatataaacagcttacatggatagccttgaagtatgcactttacaaaaagatg
acgctggccgccatcctgattcagagcaagttccgcagttactatgagcagaagaagttc
cagcagagtcggcgggcagctgtcctcatccagcagtattatcgcagctacaaggagtac
ggaaaaatgaggcagaagcaaaggacaactgctatggtccaacagaaaatcagaagcagt
ctgctgactaagaaacaggatcaagcggcacggaagattatgagatttttgcgccgttgt
cgccacagccccctggtggaccgtagactgtacaaaaggttactgttcctttcaatctgg
aaggcctctgattggtcctgcagcttcaagagttcagctgccatcctcaatcgggcttta
ggattttttgttaactgtgctactctgaaccacaccagtgtccagaatcctgacatcgta
ctggtccattacctgaacgtgccagctatagaagactgtgggaagccatgtggtccgata
ttgtgctccatcaacactgacaaaaaagagtgggccaaatggtcaaaagaggaactaatc
agccaacttaaacccatgttttag
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integrated database retrieval system
