Rhincodon typus (whale shark): 109934046
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Entry
109934046 CDS
T06055
Symbol
casz1
Name
(RefSeq) zinc finger protein castor homolog 1 isoform X1
KO
K25209
zinc finger protein castor
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109934046 (casz1)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109934046 (casz1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Phage_YorO
Motif
Other DBs
NCBI-GeneID:
109934046
NCBI-ProteinID:
XP_048471102
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All DBs
Position
31:3977037..4347207
Genome browser
AA seq
1777 aa
AA seq
DB search
MAAKRKGGLKLNAICAKLSRQVDYNFGAEHTEPDHKPQENNSADGLRHGDQEGDTDSPDG
LQDIQKLEEDKKRREAIEKWVNGEYTDEHGERGEERVIKAGDGEYIAPEGVYMVQPKGCS
DEEDNDGAQGSLDGSYMDDRDSEEVGLKEEGYNSSSEASIRQASIASSGETSTLHDYAAT
TMNEFLGMFGYDDQNVRDELAKKISFDKLNATTSETYPAASPSEDSLARRVRISKYEEYI
RKLKAGEHLPRLLPVPKAEDSSSRTLGGKDPVPAGGQFPGQEAPIRHDAKPTAPTAPSGS
SAQAHGLLSRASKYDYFIQKLKIGESIRPQNGNSYKRPSKYDLENVKYLHLFKPGEGDPD
MGGAIAFKTGKVGRPSKYDIKNIQKLAMGKAPTNPGITPLSSSPCALAASVESTASAGFG
STDLLKSSFSKADSITTGTVSTVNRLSKAEPSLDDSAGRLPSSNVSAVNRNGLSSEKPGA
MTDDANIYQKYIARFSGSQQCGHIHCAYQYREHYHCLDPECNYQRFTSKQDVIRHYNMHK
KRDNSLQHGFMRFSPLDDCSVYYHGCHLNGKSTHYHCMQVGCTKVYTSTSDVMTHENFHK
KNAQLINDGFQRFRATEDCGTLGCQFYGQKTTHFHCRRPGCTFTFKNKCDIEKHKSYHIK
DDAYAKDGFKKFYKYEECKYEGCVYSKATNHFHCIRVGCGFTFTSTSQMTSHKRKHERRH
IRNAGGLGLASQLLGRKENEQDDSSNDDLIDYSAISSKNSSLSASPTSQQSSVPMLLPTP
TTEISSTQAIKPTSSVIPVTKVSTILPQTLASPIPVALALSNAGLSNTGPFFPIIPNRVS
MTLPVTAANLISTISSSVPTLPTESPSQVVSGSSNTIPLSPAAATTIMEKITASKGLISP
MMARLAAAALKPSNPADVAGNEQQTQLNQFNLVPLKQEPSDITKTQSQDSTQNQSLDLSL
KEHSTESNGHVDSGQTSLLSSFLNKMSQNSSGLSNLLNLKTEPDCAQSDAEQMPYMNKAL
TPQRQEKRQEFWEKYLRRFTTEDYCETQCDFLHKTHFHCAVEDCGALFSTLDGAVKHANF
HFRADGGAVKVKSEPSLPTTIPVEIRAAGAGAGTGTATAAFSSVAMVTAAAMLASSAGPA
VVTAAPTLLAWKQLAASMPQLPASTLATSPLATTSLENAKPQVKPGFLQFQENDPCLATD
CKYANKFHFHCLFGNCKYVCKTSGKAESHCLDHINPNNNLVNVRDQFSYYSLQCLCPNQQ
CEFRMRGHYHCLRPFCNFVTNITTKLPWHIKKHEKAERRAANGFKYFTKREECSRLGCKY
NQVNSHFHCIREGCHFSFLLKHQMTSHSRKHMRRMLGKNFDKIPNQGPRSDDALGSVAVA
TGSSAMSSTPNMMDTETDEYMDYAAGTSPAGLSSESSVPDRSCTSTPIGNESSAAGNTIS
LPTASGAKKRFWIIEDMSPFGKRRKTASSRKMLDEGMMLEGFKRYDLYEDCKDTSCQFSL
KVTHYHCTRENCGYKFCGRTHMYKHAQHHDRVDNLVLDDFKRFKSSLRCYFADCQFSGNS
THFHCLRCGFRCTDSTKVTAHRKHHGKQDVISAAGFCQFSSSVDCEVPDCKYKLKCSHFH
CTYPECKHTVVGMSQMDSHKRKHEKLERGETTSASPTRDAMHSTGATTEYDSQGSSLNLD
GSLNLSTNVDSSLFFLRNPAGIGLNDSLDLSTKPHEAVSVAGTLQEDPAVTSGDAEDEND
MTQDEELNEDDDLNTDSDSTHGTTPENMDEKDDATGL
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaagaggaaaggaggcctaaagctgaatgctatctgtgccaagttgagtcgg
caggttgactacaactttggggcagagcatactgagccagaccacaaacctcaagagaac
aatagcgctgacgggctgcgtcatggtgaccaggagggggacactgactctcccgatgga
cttcaggacatccaaaagttggaggaggacaagaaaaggcgggaagcgattgaaaaatgg
gtgaacggggaatacacagatgaacatggggagcgcggtgaagaaagggtaataaaggct
ggagacggcgagtacattgcccctgaaggggtctacatggtgcagcccaaaggttgtagt
gatgaggaggacaatgatggagctcaaggctctctcgatggcagttacatggatgacaga
gactctgaggaagtgggactgaaggaggaaggctacaattcttccagcgaggccagtata
agacaagccagtattgcctcttcaggggagacatcgacactccatgactatgcagcaacc
acgatgaatgaattcctggggatgtttggctacgatgaccagaatgtcagggatgagctg
gccaagaagatcagttttgacaagttgaacgccactacctcagagacctacccagcagcc
tccccgagcgaggacagcttagctcggagggtgcgcatttccaaatacgaggaatacatt
cggaagctcaaggcaggggagcacctgcccaggctgctcccggttcccaaagctgaggat
tcgagctcccggacacttggagggaaggatccggtcccagctggaggccagttccctggg
caggaagcccccattcgccacgacgccaagcccactgcccccactgccccttccggctcc
tcggcccaggcacacggccttctctctcgcgcttccaagtacgactacttcattcagaag
ctgaagatcggcgaaagcatccggccccagaacggcaacagctacaagaggccatcaaag
tacgacctggaaaatgtgaagtacctgcacctcttcaagccgggtgagggtgacccggac
atggggggcgccatcgccttcaaaactggaaaggtgggccgcccatccaagtacgacatt
aaaaacatccagaagctggccatggggaaggctcccaccaaccccggcatcacccctctg
tcgagcagcccttgtgcactggccgcgagtgtcgaatccaccgcctcggctggctttggc
agcaccgaccttctgaagtccagtttctccaaggccgactccattacaactggaactgtc
tcgacagtcaaccgcctttccaaagctgaaccttcgctggatgactccgcggggagactg
cccagttcgaatgtatctgcagtaaaccggaacggactgtcatcagagaagccaggtgcc
atgactgatgatgcgaatatttaccaaaagtacattgccaggttctctggcagtcagcaa
tgtggacacattcactgtgcctatcagtacagagagcactaccactgtctggatcctgag
tgcaattaccagaggtttaccagtaaacaggatgtgatacgacactacaacatgcacaag
aagagagataactccctgcaacatggtttcatgcgcttcagccccttggatgactgcagt
gtctactaccatggctgccaccttaatggaaagagcacgcactaccattgcatgcaggtg
ggttgtactaaggtttacaccagtacgtccgatgtgatgacccatgaaaacttccacaag
aagaatgcccagctaatcaacgatggctttcagcgctttcgtgcaacggaggattgtggg
actcttggctgccagttctatggacaaaagaccacacacttccactgcaggcgtcctggt
tgtactttcaccttcaaaaacaagtgtgacatcgagaagcacaagagttaccacatcaag
gatgatgcctacgccaaggatggcttcaagaagttctacaaatacgaggagtgcaagtat
gagggctgtgtctacagcaaggccacgaaccacttccactgtatccgggtgggctgcggc
ttcacattcacttccaccagtcagatgacctcgcacaagcgaaaacacgaacgccgccac
atccggaatgcgggaggtctcggcctagcttctcagctgctgggccgcaaggagaacgaa
caggatgactccagcaatgatgacctgattgactactcagcgataagcagcaagaactca
agtctgagtgcatctccgacaagccaacaatcttcggtaccgatgctcctccccactccc
accacagagatctcctcgacccaggccatcaagccgacaagtagcgtcatcccagtgacc
aaagtgtcgacgatacttccgcaaacgctggccagccccatcccggtcgccttggcactc
tccaatgctggtctctccaatacgggccccttcttccctatcattcccaacagggtctcc
atgaccctccccgtgacagcagccaacctgatatccaccatctcctccagcgttcccacc
ttgccaacggaatcaccttcgcaagttgtctcggggtccagcaacacaatccccctgtct
ccagctgctgcaaccaccatcatggagaagatcacggccagcaaagggctcatctccccg
atgatggcccgccttgcagctgcagctctcaaaccatccaacccagcagatgtagcagga
aatgagcagcaaacgcagttgaaccagttcaatctggtcccactcaagcaagagccaagt
gacatcaccaagacccaatctcaagactcaacacagaatcagagccttgatctcagcttg
aaggagcacagcactgaatccaatggacatgtggattcgggacagacatccctgttatcc
tcatttctcaataagatgtcccaaaacagcagcggactgagcaatttgctgaacctcaag
acagaaccggactgtgcacagtctgatgcagaacagatgccctacatgaataaagctttg
accccacagagacaggagaaacgacaggaattctgggagaaatacctgcgcagatttacc
acggaagattactgtgagacccagtgtgacttcctacacaaaacccatttccattgtgca
gtagaagattgtggtgcccttttcagtaccttggatggagctgttaagcacgccaacttc
cactttcgggcagacggcggggcggtgaaagtgaagtcggagccttccctgccaaccaca
attcccgtcgagatccgagcagccggggccggggccgggaccgggaccgcgaccgcggcc
ttctcctccgtcgccatggtaactgccgccgccatgttggcctccagcgcgggccctgcc
gttgtcaccgccgccccgacgctgctcgcctggaaacagctggccgcctccatgccgcag
ctgcccgcgtccacactggcaacctcccccttggcgaccacatccctagagaacgccaag
cctcaggtcaaaccgggcttcctccagtttcaagagaacgatccctgtctggcgactgat
tgcaaatatgccaataagttccacttccactgtctgtttggaaactgcaagtatgtgtgc
aaaacgtcagggaaggctgaatcacattgtctcgatcacatcaatcccaacaacaacctt
gtcaatgtgcgtgaccagttctcctattactccctacagtgcctctgtccaaatcagcaa
tgtgagttccggatgaggggacactaccactgtttacgaccgttttgtaactttgtgact
aacatcaccacgaaactcccctggcacatcaagaaacatgagaaagcagaaagaagagct
gcaaatggattcaagtacttcaccaaacgagaagaatgtagcaggctaggttgtaagtac
aatcaggtgaacagccacttccactgtatccgcgagggttgccatttttccttcttgctg
aagcatcagatgacatcacattcccgcaagcacatgagaagaatgctgggtaaaaacttt
gacaagattcccaatcagggtcccaggagcgacgatgcattgggaagcgtggctgttgct
accggctcctcagcaatgagttcaacacccaacatgatggacacggaaacagacgagtac
atggactacgcagcgggtacaagccctgcaggtctgtcctcggagtcctccgtgccagac
cgaagctgcacgagtacgcccatcggaaatgaaagcagtgcagctgggaacacgatttca
cttccaactgcttctggcgcgaagaaaagattctggatcatcgaagacatgtctccgttt
ggaaagcgacggaagacagcctcttcccggaaaatgctggatgaaggaatgatgctggag
ggtttcaaacgctacgatctctacgaagactgcaaagacacctcttgccaattctcgctg
aaagtcacccactaccactgcacccgggagaattgtggctacaagttctgcggccgcact
cacatgtacaaacacgcccagcatcatgaccgagtggacaacctcgttctcgatgacttc
aaacgctttaagtcctcgctgaggtgctattttgcggactgtcagttttctggaaacagt
acccacttccactgccttcggtgtggtttccgctgtacagacagcaccaaggtgactgcc
catcggaaacaccatggcaagcaagatgtgatcagtgctgcaggcttctgccagttcagt
tcaagtgtggactgtgaagtccctgactgtaaatacaagctgaagtgctcccatttccac
tgcacctaccctgagtgcaaacacacggtggtgggcatgtcacagatggactctcacaag
cgcaaacacgagaagttggaacgtggggaaacgacatctgcctcgcccacccgcgatgcc
atgcacagcacaggcgccacgacggagtatgattcccagggctcctccctcaacctggat
ggctccctaaatctcagcaccaatgtcgacagctccctgttcttcctccgaaaccctgct
ggcatcggattgaacgactcgctggatctgagcacaaagccccacgaggccgtctcggtg
gctgggacactccaggaagaccccgctgtcacatccggagatgcagaagatgagaacgac
atgacacaggatgaagagctcaatgaagatgatgatctcaacacggactctgacagcacc
catggtaccacacccgagaacatggacgagaaagacgacgccacagggctgtag
DBGET
integrated database retrieval system
