Rhincodon typus (whale shark): 109934070
Help
Entry
109934070 CDS
T06055
Symbol
caskin1
Name
(RefSeq) caskin-1 isoform X1
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Caskin-Pro-rich
Caskin-tail
Ank_3
Caskin1-CID
SAM_1
SAM_2
SH3_2
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
109934070
NCBI-ProteinID:
XP_048465866
LinkDB
All DBs
Position
21:14844541..15423606
Genome browser
AA seq
1508 aa
AA seq
DB search
MGKDQELLQAVKTEDVAAVQKLLQRPKQGKAKLLGSAKRVNVNFQDLDGFSALHHAALNG
NTELISLLIEAQATVDIKDNKAMRPLHYAAWQGKAEPMKMLLKAGSSLNSQSDEGQIPLH
LAAQHGHYEVSEMLLQHQSNPCIVDIAGKTPLDLACEFGRVGVVQLLLSSNMCAALLEAK
PGDITDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKAGTALHEAALCGKTEVVRLL
LESGINAHIKNTYNQTALDIVHQFTATQASKEIKQMLRDASAALQVRAVKDYCNNYDLTS
LNVKAGDVITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSSIAEVINKRSGSWDAVIYAHS
CQQYHKIQLTAYGTAIVNGDSSHHFNSLPPPPPPPPFNHQPLFSSFGYHRANSSIEELPH
GQGSRGSESSPSHLSPVQPVTTTPEEIWVLRKPFAGGDRSSAGSTGSVATVRSSGSGQSA
GGAATAPVPEGSKFLQTVLTQKGSAPETTGGEGVTKSEQPAGAAQQQSGSSCPLGEQPYS
EPQLKKADTQSETKNDLMEWLSIIGLAQYYKTLVENGYENIEFITDITWEDLQEIGITKL
GHQKKFMLAVKKLAEIQRATRYESGTLKKKAPQSLEIVTIESPQGENAECQSPKMSTFQD
SELSNELQAAMTSAGDAKDSLEPKQANHTVPAVEGTAYQAEGATQECDNSSGAKVKLNGT
TQEVAGGGSKLQKAALSKSQENLESPSQRSIVTEVVGPTRRSHRQGVQRASVPPAPGKPR
ESFSHAHQALVSMSTFTPPQTPTKPRPSSPQTLNVPQATAKVKPIPQLLQTDRPMSPRSL
PQSPTHRGFAYVVPQPVEGEGSVGPSHTSSPLAQAVPVLPVSVPVLCLPPHANDSEGDPS
RPKKRAHSVSRYAVSDSEQEKDELALPDAGPYATIQRHVARSHSVRGHSAADKNVNRSQS
FALRPKKKGPPPPPPKRSSSAISSTNLGDDLPKEKETGSLKDPDAKARLKEQRRASDFGG
TVETGSAGSVKSIAAMLEMSSIGGGARALTLHRSFKAERGPGGSYGPLAQPVSSEHSRVA
TVLATVKRGPLDRSRDAIGLDGEVINRRRTISGPVTGLIAAARKEKADGGPPPGPEAEMP
VDRLQVDPTGSSRNSSSENLPFAEEGNLTIKQRPRQPLKTDGAECLPHLQVNSELVKQQY
SGFTAFELTSTLKRKGKPRPTQQQEVMAFHLTESNTVKRRPKTREKDQLESPQEAHHHAM
LQNGTGTVKRRPVSDMTGGETYPSFLTVGEIPRRNSGEHASQFSDGETKRPVKPPVSPKP
TLTQPTGLKRHGLSAANAKKSPLPGPGSPEVKRAPPPVSPKPILPPPLTPPKPIKPHTIL
QSLSAGPTPVPSPAKQPTIKAASTPPSLCSSPAKPITGAQPQQVPVKPPRSSIAGSSTEM
ATTEVAQLKLEETSASLAAALQAVEEKIKHDEGQEAKTTSEVKSAGSILDDIGSMFDDLA
DQLDAMLE
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagatcaggaattactgcaagctgtcaaaaccgaagatgtagctgcagtgcag
aagctgttgcaaaggccgaaacaaggcaaagcgaagctattaggatctgccaagagagtg
aatgtgaactttcaagatctggatggattttctgctctgcaccatgctgcactcaatggg
aacactgagctcatctccctattgattgaagcccaggctactgtggatatcaaggacaat
aaagctatgaggccgttgcactatgctgcgtggcaagggaaggctgagccaatgaaaatg
ctcctgaaggcagggtcaagtctcaactcccaatcagatgaaggccaaatcccattgcac
cttgctgcgcagcacggacactatgaagtgtctgagatgcttttgcaacatcagtcaaac
ccgtgtatagtggacattgctggcaagacacccttggacctggcctgtgaatttggcaga
gttggggtggtacagttacttctaagcagtaacatgtgtgctgctctgcttgaagcaaag
cctggggatatcaccgatcccaatggaaccagcccactacatctggctgccaagaatgga
catatcgacataataaggcttctgctccaggctggaattgatatcaatcgtcagacaaag
gctggaacagctttacatgaagctgcactctgtgggaaaactgaagtggttcgcttgcta
ctggaaagcgggattaatgcacacatcaagaacacttacaatcagacggccctggacatt
gttcatcagttcacagcaacacaagcaagcaaagagattaagcaaatgctcagagatgcc
tctgctgccctgcaggtcagggctgtgaaggactactgtaacaattatgacctgaccagc
cttaatgtcaaagcaggggatgttattacagttctggagcagcatcctgatgggaggtgg
aaaggctgtatccatgacaacagaactggcaatgacagagtgggctatttcccatcatct
attgcggaggtgattaacaagagatcaggttcttgggacgcagttatttatgcccacagt
tgtcagcaatatcacaagatacagctcacggcctatggcacagcaatagtcaatggtgac
tcctctcatcactttaattccctgccaccaccccctccacctccacctttcaatcatcag
ccacttttcagttcctttggttatcacagagccaatagcagtatagaagaattaccccat
ggacaaggttcccgcggttctgagtcaagtccttcccatctgtctccagtgcaaccagtc
acgaccacgcctgaggagatctgggtactacggaaaccatttgcaggtggggaccgcagc
agtgcggggagcacaggaagcgtggccactgttcggagctcgggaagtggacagagtgca
gggggcgctgctacagccccagttcctgaggggagtaagtttctacaaacagtgctaact
cagaagggatcggcaccagagacgacaggaggtgaaggagttaccaaatcagagcagcct
gcaggagctgcccagcagcagagcggatccagctgcccattgggagaacaaccgtacagt
gaaccgcagctgaagaaggctgacacacagtcagaaacgaagaatgacctgatggaatgg
ctctccatcattggcctggcacaatattacaagacacttgtggagaacggttatgaaaac
atcgagttcatcactgacatcacttgggaggacctccaggaaattggcatcacaaagttg
ggtcatcaaaagaagtttatgctcgctgtgaagaaactggcagaaatccaacgagccacc
cgctatgagtctggcaccttgaagaagaaagccccacagtcgttggagattgtgactata
gagtctcctcaaggtgaaaatgctgaatgccagtctcccaagatgtctaccttccaggac
agcgaactgagcaatgagctgcaagccgccatgaccagtgctggagatgcgaaggacagc
cttgagccgaaacaagccaaccacactgtgcctgctgtagagggcactgcctaccaagca
gaaggggccacccaggagtgtgacaacagcagcggtgccaaggtgaagctgaatggcacc
actcaggaagtagcaggaggagggagcaagctgcaaaaggcagccctgtccaaaagccag
gaaaacctcgagagcccgagccaacgatcgattgtcacagaagtagttggtcccacaaga
cgcagccaccgacaaggggttcaaagagcgagcgtaccaccggcgcctggcaagccaaga
gagtccttctctcacgctcatcaagcgctggtctcgatgtcaacattcaccccaccacag
acgcccacaaagcctaggccttcctctccgcagaccctcaatgtccctcaggccacggcc
aaagtgaagcccatcccgcagctcctgcagacggacaggcccatgtccccgaggtctctg
ccacagtcgcccactcaccggggctttgcctatgtcgtgccacagcccgtggaaggtgag
gggtcagtggggcccagccacacatcgagcccgctggcccaggctgtccccgttctgcca
gtttccgtccccgtgctctgcctccctccgcacgccaacgattccgagggagacccctcg
aggccgaagaagcgagcgcacagcgtgagccgctacgccgtgtctgacagcgagcaggag
aaggatgagctggccttacccgacgcaggcccatatgccaccatccagaggcacgtggcc
cgcagccactcggtgagggggcactcggccgccgacaaaaacgtcaaccgtagccagtca
tttgcgctgaggccgaagaagaaagggccgccgccaccgccacccaaacggtccagctcg
gccatttccagcaccaacctcggtgacgacttgccaaaggagaaggagacaggcagcctc
aaggaccccgacgccaaggccaggctcaaggagcagcggagggccagtgattttgggggg
accgtggagacggggagtgccggcagcgtgaagagcatcgccgccatgttggagatgtca
tccatcggcggcggcgcccgggccctcacccttcaccggtcgttcaaggcggagaggggc
cccggcggctcctacggcccgctggcacagccggtcagctcggaacattccagagtcgcc
accgtgctggccactgtgaagcgcgggcctctcgacaggtcccgggatgcgatcgggctg
gacggcgaggtcatcaatcggaggcggaccatcagtggacctgtcacgggcctgatcgca
gctgccaggaaggagaaggccgacggcggcccacctcctgggcctgaggccgagatgccc
gtggacaggcttcaggtggatccgaccggatcgtccaggaacagttcctcggagaatctg
ccgttcgccgaggaaggaaacctgaccatcaagcaacggcctcgccagccgctgaaaacc
gacggtgcggaatgtctaccccatctccaggtcaactccgagcttgtgaagcaacagtat
tccggcttcaccgcgttcgaactcacaagcacactgaaacggaaagggaagcccaggcca
acccagcagcaagaggtcatggccttccatttaaccgagtcaaataccgtcaaaaggcgt
ccaaaaaccagggagaaggatcaactggaatctcctcaggaggcccatcaccatgcgatg
cttcagaatggcacaggaacagttaaaagaaggccggtgtcagacatgacaggaggagag
acgtatccgagcttcttgactgtaggagagatcccccgaagaaacagcggagagcatgcc
tcccagttttcagacggggagacgaaaagacctgttaaaccaccagtgtctccaaaacct
acccttactcagccaacaggtttaaaaagacatggactgtcagcagccaatgccaagaag
tctccgttgcctggtcccgggagcccagaagtgaaacgcgccccaccccctgtctcccca
aaaccaatcctacctccccctctgacccctcccaaacccatcaaaccccacaccattctg
cagtcgctgagtgcaggccccacccctgtcccttctcctgccaagcaaccaaccatcaaa
gcagcaagcacaccgccgtccctgtgttcgagcccagctaaacccatcaccggagctcag
ccccaacaggtcccggtcaagccaccaaggtcctcgatagctggctcttccacagagatg
gccacgacagaagtagcacaactgaagctagaggagaccagtgcttcactggcagcagct
ctacaggctgtggaggagaagatcaaacacgacgagggccaggaagcaaagaccacatct
gaagttaagagcgcaggcagcattctagacgacattggcagcatgtttgatgacttggct
gaccaactggatgccatgttagaatga
DBGET
integrated database retrieval system
