Rhincodon typus (whale shark): 109934153
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Entry
109934153 CDS
T06055
Symbol
eml1
Name
(RefSeq) echinoderm microtubule-associated protein-like 1 isoform X1
KO
K18595
echinoderm microtubule-associated protein-like 1/2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109934153 (eml1)
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EMAP
109934153 (eml1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
CFAP251_N
HELP
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_HPS5
ASA1
PAC11
TRM82_WD
Beta-prop_ACSF4
RMC1_N
Beta-prop_Aladin
PKcGMP_CC
Beta-prop_RIG_1st
Beta-prop_TEP1_C
Tricorn_2nd
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_NWD2_C
SlyX
Motif
Other DBs
NCBI-GeneID:
109934153
NCBI-ProteinID:
XP_048456102
LinkDB
All DBs
Position
8:complement(34675783..34932562)
Genome browser
AA seq
814 aa
AA seq
DB search
MEDGFSGYSSLYDTSSLLQFCTDDSASAASSMEMTDRIASLEQRVQMQEDEIQLLKSALA
DVVRRLNVSEEQQAMLNRKGPTKARPIVQALPLRPTVNNGTVLPKKGCGSLPSPSGVRKD
ITPATKSAVKRSNSSERVSSVARRESFGESKNSRTRTGSTSSGSSGKKTSDSKPKDPLFN
AEEGYVKMFLRGRPITMYMPQVIKETYSLEDKGELPAKKLKLDWVYGYRGRDCRCNLYLL
PTGEIVYFIASVVVLYNVEEQLQRHYTGHNDDVKCLAVHPDRITIATGQVAGISKDGNQA
APHVRIWDSVSLNTLHTIGTGFFDRSVTCIAFSKSNGGCTLCAVDDSNDHVLSVWDWQKV
ERLGDIKCSNEPVFAADFHPTETNVIVTCGKSHIYFWTLEGGSFTKKQGLFEKHEKPKFV
LCATFAENGDTITGDSSGNILVWGKGTNRISYAIQGAHEGGIFALCMLRDGTLVSGGGKD
RKLISWDCNYQKIQETEVPEQFGPVRTVTKGRGEVLLIGTTRNFILQGTLSGDFHPITQG
HTDELWGLASHPNKEQFLTCGHDKHITLWDAVAHQTIWSKIIEDPAQSAGFHPSGCVVAI
GTQTGRWLVLDTDSKDLVTVHTDGNEQLSVMRYSPEGNFLAIGSHDNYIYIYTVNENGRK
YSRVGKCSGHSSFITHLDWSTDSQYLMSNSGDYEILYWMPSVCKQVVSVEQVRDVEWATY
TCTLGFHVFGVWPEGSDGTDINAVCRSNDKKLLSTGDDFGKVHLFSCPCSQARAPSHTYG
GHSSHVTSVNFLYDDSQLVSTGGKDMSVMQWKVI
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgggttctcaggctatagtagcctctacgacacctcctcgctgcttcagttc
tgcactgatgatagtgcgtctgcagccagcagcatggagatgacggatcgaatcgcctct
ctggagcagcgtgtacagatgcaggaggatgagattcaactgctcaagtcagcactggct
gatgtagtccgacgtttgaatgtttctgaagagcagcaggccatgctgaataggaaagga
cctaccaaagcaagacccatagtgcaagccttgccattaaggcctacagttaacaatgga
actgtactaccaaagaagggatgtggctctctgccatctccatctggagtcaggaaggat
ataacaccagcaaccaaaagtgctgtgaagagaagcaactcttctgagcgagtgtcatca
gttgcacgtagagaaagctttggagagtcaaagaacagcaggacgcgcactggctcaact
agcagtggttccagtgggaaaaagacgagcgacagcaaacctaaggatcctctctttaat
gcagaggaaggatatgtaaaaatgttcctgcgtggacgtccaatcaccatgtatatgccc
caagttattaaggaaacctacagtttggaagataaaggtgaacttccagccaaaaagctg
aagctagactgggtttatggttatcgaggccgggattgccgctgtaacctctatcttctg
ccaacgggtgagattgtgtatttcattgcttctgtggtcgtactatacaatgtagaggaa
caacttcagagacattatactggccacaatgatgatgtcaagtgccttgcagtccaccct
gacaggatcaccatagcgactggtcaggtagcagggataagcaaggatggaaatcaagct
gccccgcatgttcgaatctgggactctgttagtctgaatacactgcacacaattggaaca
ggtttttttgatcggtcagtcacctgcattgccttctcaaagtcaaatggaggctgtacc
ttatgcgcagtcgatgattctaatgatcatgtcctttcagtatgggattggcagaaagtt
gagagacttggtgatattaagtgttcaaatgaaccagtctttgcagcagatttccatcca
acagagaccaacgtcattgttacctgtggaaaatcacacatttacttttggacacttgaa
ggagggtctttcacaaagaaacaaggattgtttgagaaacatgagaaaccaaagtttgtg
ctgtgtgcgacctttgctgagaatggagatacaataactggggattcgagtggaaatatt
ctagtctggggaaaaggtaccaaccgcattagctatgctattcagggggcccatgaaggg
ggtatatttgcactttgcatgctgcgcgatggcactctcgtatcaggtggtggaaaagat
cgaaagttgatctcctgggactgcaattatcagaaaatccaagaaactgaggttcctgag
cagtttggtccagtgaggacagtaactaaaggaaggggagaagtattgctaattggcaca
acaaggaatttcattctacaaggcactttatctggagactttcaccctatcacccagggt
cacacagatgaactgtggggtttggccagtcatccaaataaggaacagtttctaacttgt
gggcatgacaaacatatcactctatgggatgctgtcgcgcatcagaccatatggagcaaa
atcatagaggacccagctcaatctgctggtttccacccatcaggatgtgttgttgctata
ggaacccaaactggaaggtggttagttctggatacggactcaaaggatctggtgaccgtt
cacactgatggaaatgaacagctctcagtcatgcgttattcaccagagggaaatttctta
gcaattggctcccatgataattatatttacatctacacagttaatgaaaatggcagaaaa
tacagccgagttggtaaatgctcaggtcactcaagttttatcacacatcttgactggtca
actgactctcagtatttaatgtctaattccggagactatgagatcttgtactggatgcct
tcagtctgcaagcaagtggtgagtgttgaacaggtcagggatgtagagtgggccacttat
acctgcacattaggatttcatgtttttggagtctggcctgaaggatcagatggaactgac
atcaatgctgtgtgcagatccaatgataaaaaactcttgtctacaggtgatgactttggc
aaagtgcatctgttttcatgtccatgttcacaggccagggctccaagccacacatatgga
ggacacagcagtcatgtaaccagtgtaaactttctgtacgatgacagtcaactggtttcc
actggagggaaggacatgagtgtcatgcagtggaaagtcatttaa
DBGET
integrated database retrieval system
