Rhincodon typus (whale shark): 109934164
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Entry
109934164 CDS
T06055
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109934164
04082 Neuroactive ligand signaling
109934164
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109934164
Ion channels [BR:
rtp04040
]
Ligand-gated channels
GABA-A
109934164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
109934164
NCBI-ProteinID:
XP_048453106
LinkDB
All DBs
Position
5:complement(35172347..35226351)
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AA seq
487 aa
AA seq
DB search
MFKPEVIRTARFNRTVAGIISIVQVMSYFLKTILILFCLTIDAESRKHRKKRWASQVDPR
KQGSPIIRRIPDSTKTRATSSEHLLRVGDHDFTMRPAFGGPAIPVGVDVMVESLDSISEV
NMDFTMTLYLRNYWKDERLSFPSTTNKSMTFDGRLVKKIWAPDVFFVHSKRSFIHDTTTD
NIMLRIFPDGNVLYSIRVTVTAMCNMDFSCFPLDTQTCSLEIESYAYTEDDLMLYWKGDR
DALKTDEKVSLSQFLIQRFHTTSKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATL
MVMLSWVSFWIDRQAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDVYLWVSFVF
VFLSVLEYAAVNYLTTVQERKQRKLQEKFPCICGITSTKDLMFDGTFSEADANSLAGYTR
TSISTDDRVKQVRLSIGGDSNLQKKRRLREFVGMRIIQNTHAIDKYCRMIFPASYILFNL
VYWAVYL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaccagaagtgattcgcactgcacgttttaacaggactgttgctgggattatc
tcgattgtgcaagtcatgtcgtactttttaaaaactatcctgatactcttctgcctgacg
atagatgctgaaagcaggaaacacaggaagaagaggtgggcgtctcaggtagacccacgc
aaacagggcagcccaataataaggagaattccagattcaaccaaaactcgagcaacaagc
tctgaacatcttctccgagtgggtgatcatgatttcacaatgagacctgcatttggtggc
ccagcaatacctgttggagttgatgtgatggtggaaagcctggacagtatttctgaggtg
aatatggatttcacaatgactctatatttgcgcaattattggaaagatgaacggctttca
tttcccagcactacaaataaaagtatgacatttgatggaaggctcgtcaaaaagatttgg
gcaccagacgtgttttttgttcactcaaagcggtcatttatccatgacacaaccacagat
aatataatgttacgcatctttcctgatggaaatgtgctgtacagtataagggttacagta
acagcaatgtgcaacatggatttcagctgctttcctcttgacacacagacctgttccctg
gagatagaaagctatgcttacactgaagatgaccttatgctatattggaagggtgataga
gatgcactgaagacagatgagaaggtctccttgtctcaattccttatccagagatttcac
accacctccaaattggctttctacagtagtacaggttggtacaatcgtttgtacattaac
tttactttgcgccgccacattttcttctttttgctacaaacctacttcccagcgactttg
atggtaatgttgtcctgggtgtcattctggattgatcgccaagctgtaccagctagagtt
tcattaggtataacgacagttctaacaatgtccactattatcacgggtgtgaatgcttct
atgccaagggtgtcatatattaaagctgtggacgtttacctgtgggttagttttgtgttt
gtctttctctcggtgctggagtatgcagctgtcaattacctgactacagtacaagagagg
aaacaaagaaaattgcaggaaaagtttccttgcatatgtgggattaccagcactaaggac
ttaatgtttgatggtacctttagtgaagcagatgccaacagtctggcaggatataccaga
acttcaatcagtactgatgacagggtcaagcaggttcgcctatccatcggtggagattcc
aatttacagaaaaaacgtcgccttagggagtttgttggcatgcggatcattcagaatacc
cacgcaatagataaatactgtagaatgatatttccagcatcttatatattatttaactta
gtatattgggctgtatatttatag
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