Rhincodon typus (whale shark): 109934239
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Entry
109934239 CDS
T06055
Symbol
rnf145a
Name
(RefSeq) LOW QUALITY PROTEIN: RING finger protein 145
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109934239 (rnf145a)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109934239 (rnf145a)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109934239 (rnf145a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_11
Prok-RING_4
U-box
DUF7501
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
109934239
NCBI-ProteinID:
XP_020388640
LinkDB
All DBs
Position
12:complement(10683073..10788562)
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AA seq
713 aa
AA seq
DB search
MAGLRVIMSGVREKLEAVLNVALRVPSIMVLEMLYRWDVSSFFQQIQARNNNNLLFQYKY
LALNLHYVGYIISLVLLTLPRQHLVQLYLYVLTALLLYAGHQISRDFVRSEMEFGHDGPV
YEEPLSLNRFTTALIGQLVVCTLCSFVMKTKQIWLFSAHLLPLLARFCMVPVEMLVIINR
FAMIFTGLEVLYFLASNLLVPYKLAKLAYKELVQVVEVYGLLALGMSLWNQLVVPVLFMV
FWLVLFALQIYSYFSTRDHPTSRERLLFLFLTSIAECCSTPYSLLGLMFTISFITLGVLT
LCKFYLQGYGAFMNDNLMHRGMTEGITLLILAVQTGLIELQVVHRAFLLSIILFIVVASI
LQSMLEIADPIVLALGASRNKSLWKHFRAVSLCLFLLVFPAYMAYMISQFFQMDFWLLII
ISSSVLTSLQVLGTLFIYILFMVEEFSKEPMENLDDVIYYVNGTYRLLEFLVALCVVAYG
VAETILGEWTWMGSSIIFVHSYFNVWLRAQLGWKSFLLRRDAANKINSLPTATKEQLEEH
NDICSICYQDMHSAVITPCSHFFHSACLKKWLYVQETCPFCHQQLKSQGQQVGTTTVQAL
GEQLPHNETRATQELVGQEDGPAGNDSVLAIHSEDGLVGQKEEGQKALNTDCSSHGDPGT
GEHRREQNGSHAGKIEFSHPAELCEDEDQQLSNTVEFQYTMHGGVKCPCKGIV
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctgagagtgatcatgagcggagtgagggagaagctggaggcagtgctgaat
gtggctctgcgggtgcccagcatcatggtgctggagatgttgtaccgatgggacgtgagc
tccttcttccagcagatccaggcccggaataacaacaacctgctcttccagtacaaatac
ttggctctaaaccttcactatgttggttatataataagcctcgttctcctcactttacct
cggcaacacttggtccagctatatctgtatgttttgactgcgctacttttatatgctggg
caccaaatttctcgggactttgtgaggagcgagatggagtttggtcatgatggacctgtg
tatgaggaacctttgtccctgaatcgtttcaccacagctttgatagggcagctggtggtc
tgcacactttgctccttcgttatgaagactaaacagatctggctcttttctgcccatttg
ctacctttactggcacggttctgcatggttcctgtggaaatgctcgtcattatcaacagg
tttgccatgattttcacaggactggaagtactttatttcctcgcttccaacctgttggtg
ccttacaagctggctaaattggcatacaaggaactggtgcaggtagttgaagtttatgga
ctattggcactggggatgtctctctggaatcagttggttgttcctgtgctattcatggtt
ttctggttggtcctatttgctctacagatctattcttactttagtacacgtgatcacccc
acatctcgggagagactgctattcctctttctcacaagtattgctgaatgttgcagcact
ccttattctttgttgggcctcatgttcaccatctccttcattaccctgggtgtcctgaca
ctttgcaagttctaccttcaaggttatggagctttcatgaacgacaatctcatgcataga
ggaatgactgaaggtatcacattactgattctggcagtacagactggcctgattgaattg
caagttgttcatcgagcctttctgctgagtatcattctctttattgtggtggcttcaatc
cttcagtcaatgttagaaattgctgaccctatcgttcttgcacttggagcctcaagaaac
aagagtctgtggaaacattttcgagcagtcagtctgtgtttattcttgttggtgttcccc
gcctatatggcctacatgatttctcagtttttccagatggacttttggcttctcatcatc
atttccagcagtgttctgacttccttgcaggtacttggaacacttttcatttatatcctt
tttatggtggaggaatttagtaaagaaccaatggaaaaccttgacgatgtgatctactat
gtgaatggcacatatcgcttgctcgagttcctggtggctttgtgtgttgttgcttatgga
gtagcagagacgatattaggagagtggacttggatgggttcatccatcatctttgtccat
tcctacttcaatgtctggcttcgagcacagttgggatggaagagctttcttctccgcagg
gatgcagcaaataagatcaactctctgccaactgccactaaagagcagcttgaagagcac
aatgacatttgttccatctgttaccaggacatgcattctgctgtgattacaccatgcagc
catttctttcactctgcctgtctcaagaagtggctttatgtacaagaaacttgcccattt
tgtcatcagcagctgaaatctcaagggcagcaggttgggacaacaacagtgcaagctcta
ggagagcaattgccccataatgagacaagagcgacgcaagaattggttggacaagaggat
ggacctgctggtaatgattcagttctagctatccattctgaagatggccttgtggggcaa
aaagaagaggggcagaaagctctgaatactgattgcagttctcatggagatccaggcaca
ggtgaacatcgacgtgaacaaaatggctctcacgctggcaaaattgagttttcacatcca
gcagaactttgtgaggatgaagatcaacaattgtctaatacagtagagtttcaatacaca
atgcatggcggtgtcaaatgcccatgtaagggaattgtatga
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