Rhincodon typus (whale shark): 109934269
Help
Entry
109934269 CDS
T06055
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109934269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109934269
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109934269
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109934269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
WWE_5
zf-RING_UBOX
zf-RING_11
zf-RING_2
zf-rbx1
zf-UDP
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
109934269
NCBI-ProteinID:
XP_020388664
LinkDB
All DBs
Position
24:complement(26401540..26639097)
Genome browser
AA seq
623 aa
AA seq
DB search
MARPAAATPAMLPASGFGLGFPPQNFARVVVWEWLNEHGRWRPYSAGVCHHIENIVKCNA
RGSVVLGQAEAQLSPYIIDLQSMHQFRQDTGTMRPVRRNFYDPSSAPGKGIVWEWENDSC
SWTPYDMDICITIQNAYEKQHPWLDLTSLGFCYIIDFNSMCQMNRQTQRKRRLRRRMDLA
YPLTMGSIPKSQSWPVGAQSGQPCSCQQCVLVNSTRAASNAILASQRRKIYSATNGTLTV
RQSNSYSGAALWSTASTAGSTPPKSEQTRSPTTTQLSPISQSQSTTSATPIPGQNNLNRP
GTQRSAVVSTRASIPPGVPALPVKNLNGSGPVHPALAGMTGILMCAAGLPVCLTRAPKPI
LHPPPVNKSEIKPVPGISGICRKTKKKHLKKVKSPEDVVRRYMQKVKNPPDEDCTICMER
LVSSSGYEGVMSLRGVKPELVGKLSKCSHMYHLLCLVAMYNNGNKDGSLQCPTCKAIYGE
KTGTQPPGKMEYHVIPHSLPGYPEVKTIRIVYDIPAGLQGVEHPNQGKKFTARGFPRHCY
LPDNEKGRKILKLLIVAWDRRLIFTIGTSNTTGETDTVVWNEIHHKTEFGSNLTGHGYPD
PNYLENVLAELSAQGVMEDCIKD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacccgccgccgcgaccccagcgatgctgccggcgagcggcttcggtctgggc
ttcccaccgcagaatttcgcccgggtggtggtgtgggaatggttgaacgagcacggccgc
tggagaccgtacagcgctggagtgtgtcaccacatcgagaacatcgtcaagtgcaatgcc
agagggagcgtggtgctcggccaggcggaggctcagctctccccttatatcatcgacctg
cagtctatgcatcagttccggcaggacacgggaaccatgcgtccagttcgaagaaacttt
tacgacccctcttctgctccaggaaaagggatagtgtgggaatgggaaaacgacagctgc
tcctggactccgtatgatatggatatttgtataaccattcagaatgcgtatgagaaacag
catccttggctagacctgacttctctaggattctgttacattattgacttcaacagtatg
tgtcagatgaacagacagacacagaggaagcgtcgactacgccggcgtatggacttggcc
tatcctctgacgatgggttcgatccctaagtcccaatcctggcccgttggtgcccagtcg
ggtcagccttgcagttgccagcagtgcgtcctggtgaacagcacgcgggcagcctccaat
gccatcctggcatcccagcgacggaaaatttattctgccaccaacgggactcttactgtg
cgccagagcaactcctacagtggcgccgccttgtggtcgacggcaagcacagccggcagc
acgcctccaaagtctgagcagacccgttcccccaccacaactcaactgtccccgatctcc
caaagccaaagcaccacctcagcgacgccgataccaggccagaacaacctcaacagacca
ggtacccagagatcagctgtggtcagcacgagggcttcgattcctccaggcgttcctgct
ctcccagtgaaaaacctaaatggatctggtcctgtccacccagcacttgcaggtatgact
gggattctaatgtgtgcagctggccttccagtatgtctgactcgggctcccaaaccgata
cttcatccaccacctgtcaacaagagtgaaataaagccagtgccagggatatctggtatc
tgcagaaagactaagaagaaacatctgaaaaaagtaaaatccccagaggacgtggtgcga
agatacatgcagaaggtcaagaatccaccagatgaggattgcaccatctgtatggaaagg
ctggtcagttcatcgggctatgaaggtgtcatgagtctgagaggagtgaaaccggaactg
gttggaaagctcagtaaatgcagtcacatgtaccatctcctatgccttgtggccatgtac
aacaatggcaataaggatggcagcctgcagtgccccacgtgcaaggccatctatggagag
aaaactggaacacagccacctgggaagatggagtatcatgtgatcccgcactcactccct
ggatacccagaagtcaaaactattcgcattgtttatgacatcccagcaggactacaaggc
gttgaacatcccaatcaaggaaagaagttcacagccagaggctttccccgacactgctat
ctgcctgataatgagaaaggccggaagattctgaagctcttgattgtggcatgggatcgc
aggttgattttcaccattggaacatccaacaccactggagaaacggatactgtagtatgg
aatgaaatccatcataaaacagagtttggatcaaatttaactggacatggctacccagat
cctaactatttggaaaatgttcttgcagagctatctgcccaaggagtcatggaagactgc
ataaaggactga
DBGET
integrated database retrieval system
