Rhincodon typus (whale shark): 109934280
Help
Entry
109934280 CDS
T06055
Symbol
cpeb4b
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4b isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04114
Oocyte meiosis
rtp04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
109934280 (cpeb4b)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
109934280 (cpeb4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109934280 (cpeb4b)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109934280 (cpeb4b)
Factors involved in mRNA localization
Trans-acting binding proteins
109934280 (cpeb4b)
mRNA cycle factors
P-body specific factors
109934280 (cpeb4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
Motif
Other DBs
NCBI-GeneID:
109934280
NCBI-ProteinID:
XP_048459683
LinkDB
All DBs
Position
12:complement(20113538..20196494)
Genome browser
AA seq
757 aa
AA seq
DB search
MGDYGFGLLVQTNNTNSKVAFPVRYHQTPHHHHHHHHQQQQSASTAAGSPWFFPAPAPQT
MQDELLLSEKSKSPQQQQLSPRLDQAAPPDLVLLPDSPQPEEDNTSGGGGSSSSKEKLRM
ESPILPAFDYHDPPPPPPPSSSSSSSSGLGGAGTAGTPSLTSSSSSSSSSSSTSSLTGFS
NWSAAMTPPTVGEDNFFHQGVPAPSANGALLFQNFPHHVSSGFGGSFSPQMALSQHHHAP
HHPHHHHHHPPPPPPPPPPPPPPPHQQPPQQQQHRRSPASPHPAPFPHRNAFNQLPHLAN
SISKPPSPWNSYQSPSPTSSSSSSWSSGGGVGVWGGSQGRDHRRGMTGGMAGLSSISPMK
KPFPGNHIPVHKYSRSSSAFPPKSWVEDSMLRSDNILPFQDRNRLYDTLNMHSLESSLID
IMRAEQDPLKGRLNYTHPGSDSPLSINARTYGRRRGHSSLFPVEDGFLDDGRGDQTLHSG
LSSPHCFPHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGSLVVDWPHKAESKSYF
PPKGYAFLLFQEEGSVQALIDACIEEDAKLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDG
SQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQ
QSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQLCDECQGTRCGGKFAPFFCANVTCLQY
YCEYCWAAIHSRAGREFHKPLVKEGGDRPRQVPFRWN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgggggattacgggttcggtttactagtgcagaccaataataccaacagtaaggtagct
tttccagtcagataccaccagactcctcaccaccaccatcaccatcatcaccaacagcag
cagagcgcctccactgccgccggctcgccttggttttttcctgccccggctccccagacc
atgcaggatgagctgctgctgtcggagaaatccaaatccccacagcagcagcagctctct
ccccgactcgatcaagccgctcctcctgatctagtcctcctacccgactctccccaaccc
gaagaggacaatacgagcggtggcggcggcagcagcagcagcaaagagaagctgaggatg
gagtcgcccatcctgccggctttcgactatcacgatccgccgcctcctcctcctccatca
tcttcctcgtcgtcctcatcgggactcggaggagcgggcacggcggggacgccctctctc
acctcttcttcctcttcctcctcctcctcctcctccacctcctccttgaccggtttcagc
aactggtcagcagcgatgactcctcctaccgtcggcgaggacaacttctttcaccaggga
gtccctgctccctccgccaacggggctctgctcttccaaaacttccctcaccacgtcagc
tcgggcttcgggggcagcttctctcctcagatggccctgtcccagcaccaccatgccccc
caccacccacaccaccatcaccatcaccctcctccacctccacccccaccacctccacca
cctccacctcctcaccagcagccgccccagcaacagcagcacaggaggtcacctgccagc
ccgcaccccgctccgtttccgcacagaaatgctttcaatcagctgcctcacttggccaac
agcatcagtaagcccccctccccgtggaacagctaccaaagcccgtcgcccacgtcgtcc
tcttcgtcgtcttggagctccggtggtggggtcggtgtttggggtggaagccaagggaga
gatcaccgccgagggatgaccggtgggatggcaggcctcagctccatctccccaatgaag
aagcctttccccggcaaccacatcccggtgcacaagtactcgagatccagctcggctttc
ccaccaaagtcttgggtggaagatagtatgttgaggagtgataatattttaccgtttcag
gatcgaaatagattatatgacactttaaacatgcattcactggagagttcactaattgac
atcatgagagcggaacaggacccactaaaaggtcgtctaaactacacacatccaggatca
gacagtcctctttctattaatgcaaggacatatgggcgaaggcgaggtcattcatcactt
ttccctgttgaagatgggttccttgatgatggacgcggtgatcaaactcttcatagtggc
ctaagttctcctcattgttttcctcatcaaaatggtgaacgagtggagcgatattcccgt
aaagtgtttgttggtggcttgccacctgatattgatgaagatgaaatcacagctagcttt
cgtcgttttggttcgctggttgttgactggcctcataaagcagaaagcaagtcatacttt
ccaccaaaaggctatgcatttctgctgtttcaggaggaaggttctgtgcaggctttaatt
gatgcttgcattgaagaggacgcaaagctatacctctgtgtatcaagtccaaccatcaag
gataaaccagttcaaatacgaccatggaatctcaacgatagtgattttgtaatggatggt
tcgcagccactggatccacggaaaactatttttgtaggtggtgtccccaggcctctgaga
gctgtggagctggcaatgatcatggataggctctatggtggagtatgctatgctggcatt
gacacagatcctgagttgaaatacccaaaaggtgcggggcgtgtggctttttcaaatcaa
caaagctacattgctgctatcagtgctcgctttgttcagttacagcatggagacattgat
aaacgggtggaagtcaagccatatgtccttgatgatcagctgtgtgatgaatgccagggt
acccgttgtggtgggaaatttgctccattcttctgtgccaatgtcacatgtctgcagtat
tactgtgaatactgctgggctgccatacattctcgtgctggaagagagttccacaagcca
ctcgtgaaagaaggaggagaccgtccacgtcaagttccttttcgttggaactaa
DBGET
integrated database retrieval system
