KEGG   Rhincodon typus (whale shark): 109934292
Entry
109934292         CDS       T06055                                 
Symbol
chdh
Name
(RefSeq) choline dehydrogenase, mitochondrial
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp00260  Glycine, serine and threonine metabolism
rtp00670  One carbon pool by folate
rtp01100  Metabolic pathways
Module
rtp_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    109934292 (chdh)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    109934292 (chdh)
Enzymes [BR:rtp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     109934292 (chdh)
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C Lycopene_cycl NAD_binding_8 DAO Pyr_redox_2 FAD_binding_2 Thi4 ApbA
Other DBs
NCBI-GeneID: 109934292
NCBI-ProteinID: XP_048462680
LinkDB
Position
16:complement(26659611..26730077)
AA seq 579 aa
MFYISRTVLTHAVLTARIMHRLIGFAKVNVSNSLFARSQQHKNLSISAKTSAPKVQTYSY
VIVGAGSAGCVLANRLSEDPDNSVLLLEAGPKDTIWNSKRLMWKIHMPAALIYNLCDDKY
NWYYHTVAQKHMNNRVMYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWERQGAIGWDYDHC
LPYFRKAQCHELGADRYRGGNGPLQVSRGKTNHPLHIAFLEAGQQAGYPFTDDMNGFQQE
GVGWMDMTIYKGKRWSAATAYLSPALLRRNLTAEEKTFVTKILFDGTKAIGVEYIQAGLP
IKVYAKKEVILSGGSINSPQLLMLSGIGNADDLKALGIPVVCHRPGVGQNLQDHLELYVQ
QQCTEPITLYQSQKPFKMIRIGLEWLWKFTGRILLPSNNLDLEININTSGSVHVGPMRPT
SVGWMKLKSANPTDHPIIEPNYLSTETDVLELRESVKLSREIFAQKAFDRFRGPEITPGS
HIQTDKEIDSFVREKADSAYHPSCTCKMGQPSDPMAVVDPETRVIGVENLRVVDSSIMPS
VVSGNLNAPTIMLAEKAADIIKGCPVLCDKDVPVYKHKS
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgttctacatctccaggactgttttgacgcacgctgttctcacagcaagaattatgcac
agattgattgggttcgcaaaagtgaacgtgtcaaacagtttgtttgctagatcccagcaa
cacaagaacttaagtatatcagccaaaaccagtgcaccaaaggtacaaacatatagctat
gtaatagtgggagcaggttctgcaggatgtgtcttggccaaccgtctttcagaagatcct
gataattcggtgttgcttttggaagcgggacctaaagatacaatatggaacagcaagaga
ctcatgtggaaaattcatatgccagcagcattgatatacaatctatgtgatgataagtat
aactggtattatcatactgtagctcagaaacatatgaataaccgtgtaatgtactggccc
agaggtcgtgtttggggaggatcctcttcattgaatgcaatggtctatatccgtggacat
gcagaggattataatcgttgggagagacaaggtgctattggttgggattacgatcactgc
cttccttattttaggaaggcacagtgtcacgagctaggagctgacaggtatagaggagga
aacggacctttacaagtatcacgtggaaaaacaaaccatcctcttcatatcgctttcctt
gaagctgggcaacaggctggctacccatttactgatgacatgaatggatttcagcaagag
ggtgtcggttggatggatatgacaatttacaaaggaaaaaggtggagtgcagccactgcc
tatttgtcccctgctttgttacgcagaaacttaacagcagaagagaaaacctttgtaact
aaaattttgtttgatggcaccaaagccattggagttgaatacattcaagctggattacca
ataaaggtctatgccaagaaagaagtgatcctaagtggaggctcaattaactcaccccag
cttcttatgttatctggcattggcaatgcagatgaccttaaagcattgggaattcctgtt
gtttgccaccgtcctggtgtgggccagaatctgcaagaccatctagaattgtatgtacaa
caacaatgcactgaacctattactctgtaccaatctcaaaaaccattcaagatgatcagg
attggcctggaatggctttggaaattcacaggtagaattttgttaccttctaataatttg
gaccttgaaataaacatcaatacttcaggatcagttcacgtgggcccaatgagacccaca
agtgttggttggatgaagctcaagagtgcaaaccccacagaccatccaattattgaacca
aactacttatctacagaaactgatgtcctggaactccgtgaatcagtgaagctaagcagg
gaaatttttgctcaaaaggcatttgatagattccgtggtccagagatcacacctggaagc
catatccaaacagataaggaaattgattcttttgtgagagagaaagctgatagtgcctac
catccatcgtgcacctgtaaaatgggccaaccttctgatcccatggcagttgttgaccct
gagactagagttataggggtggagaacctgcgggttgttgattcttctataatgccaagt
gttgttagtggcaatttaaatgcccccacaatcatgttggctgagaaggctgctgacatc
atcaaagggtgtccagtgctctgtgacaaggatgttcctgtttataaacacaaatcttaa

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