Rhincodon typus (whale shark): 109934522
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Entry
109934522 CDS
T06055
Symbol
syne3
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109934522 (syne3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109934522 (syne3)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
109934522 (syne3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYNE3
KASH
Spectrin_SYNE1_2
rva_4
Motif
Other DBs
NCBI-GeneID:
109934522
NCBI-ProteinID:
XP_048455738
LinkDB
All DBs
Position
8:complement(43261..134737)
Genome browser
AA seq
702 aa
AA seq
DB search
MSPEEEFGSCLENAESWMRMIQERLEATDNVQGPKAALENRLRESEVILAEEPEGNLRLG
RALVKAESLLQGRSDDEKHEIHAAMKHIKTLWEDTQINMAHCHSRIEWVLLHWSEYLKAR
EDYFLWLMNMKQKLEPDLELQLGLKEKKLQLSHHTILLSNILNQAPLLERLIQESGSLFA
KTEDETVNEAAQQILKADHEALEMKAKEKVKILEAIVQEHQQYADRREKFQNWLQCMKEK
INNFNTCTGDKNQMERSLRELKELSDAVGSKKGELDNLQVQATAVILNTSPLGAEHITKD
LEELRADWNSLRLRCQQDQEPLKLGLHSVLESKSRAEQLEREVAKFAEWLQSLDLQPPDD
DGMETAWCKCLLTRSSILAEEPRVEEFQLKLKEFCRFSQNEEQLCNKVLSVIQDYKRVKG
QIMKRCNQLGARLRCDFQKFLQEFHQWRNSTRSLLHLPLDTEGGMLTKTYLQNIEDHLAR
SNQLKIQLDRFQGLEGMLDSVYSEEQIATFESELREAVQQRTFLTDGLLQRRRKLQMNGR
DPTDHKLLLKKFEVWLKTEDRKLTSIFAAKSPRSNRERKNRKQGLKVLQSRVPHGQKIFE
ELLSAEFSGVNEEEKQLEDLRYRWILYKTKLKEAEELLTSRGICHYLSRACCAALPLQLL
LLLLLLLAFLLPLIEEQDSCSVVNNFARSFYLTLRYQGPPPT
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagcccagaggaagagtttggaagctgtttggaaaatgcagagagctggatgcggatg
atccaggagcgcttagaggccactgacaatgtccaaggaccaaaggctgctttagaaaac
agactgagagagtctgaggttatcttagcagaagagcctgaagggaatctccgactggga
agggcgctggtgaaggcagaatctctccttcaaggcagaagtgacgatgagaagcatgaa
attcatgcggcaatgaaacatattaaaaccctgtgggaggatactcaaatcaatatggcc
cattgtcacagtcggattgaatgggttttgctgcactggtctgagtatttgaaggcgagg
gaagattattttctttggttgatgaatatgaaacaaaagctggagcccgatcttgaatta
cagcttggtctcaaggagaagaaattacaattaagccatcacacaatcctactcagtaac
attttgaaccaggctcctctgcttgagcgactcatccaggaatctgggtccttatttgca
aagactgaagatgagaccgtcaatgaggcagcgcagcagatattaaaagctgatcatgaa
gcacttgagatgaaagcaaaggaaaaggtgaagattttggaagcaattgtacaagagcat
caacaatatgcagacaggcgggagaaattccagaactggctgcagtgcatgaaggaaaaa
attaacaacttcaacacgtgcacaggcgacaagaatcagatggagagatcacttagagag
ctaaaggaactgagtgatgcagtcggcagcaaaaaaggagagctggacaatctgcaggtt
caggccacggctgtaatcctcaatacatctcctttaggtgctgagcacatcaccaaagac
ttggaagagctgagggcagactggaatagtctgaggctgaggtgccagcaagatcaggag
ccactgaagcttggacttcattctgtgctggaatccaagtcaagggctgagcagctggag
agagaagttgccaagttcgcagaatggctacagagcttagatttgcagcccccagatgat
gatgggatggaaactgcatggtgcaaatgtcttctcaccaggtcttcaattttagcagaa
gagccaagagtggaagagtttcagcttaaattgaaagaattttgcagattctctcagaac
gaagaacaactttgtaacaaagtcctgagtgtaattcaagattataaaagggtaaaaggg
cagattatgaagaggtgcaaccagcttggagcaagactgcggtgtgattttcagaagttc
ctgcaagagtttcatcaatggaggaacagcactcgcagcctgctgcacttgcctctggac
acggagggtgggatgttgaccaagacttatctgcagaacattgaggatcatctggctcgt
agcaaccaattgaaaatccaactcgacagatttcaggggctagagggaatgttggacagt
gtctacagtgaagaacagattgcaacgtttgagtctgaactccgagaggcagtacagcaa
cgaacattccttactgatggtcttttacagaggaggagaaaattgcagatgaatggtcga
gatcccactgatcacaaactgctgttgaagaagtttgaagtgtggctgaaaactgaagat
cggaaattgacaagcatttttgctgccaaaagtcctcggagtaacagagaaagaaaaaac
agaaaacaaggcctgaaggtgctgcaatctcgtgtccctcatggccagaaaatttttgaa
gagctcctcagtgctgagttttctggcgtgaatgaagaagagaaacagctggaagatttg
cgataccgatggatattgtataaaacaaaattgaaggaggctgaagagcttttgacgtca
cgagggatctgccactatttgtcccgtgcctgttgtgcagcgctccctctccagctgctc
ctgctccttttgctgctgcttgcctttttgctgccactgattgaggagcaggacagctgc
agtgtggtgaacaactttgctcgctccttctacctgacactgagatatcagggaccccct
ccaacataa
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