Rhincodon typus (whale shark): 109934543
Help
Entry
109934543 CDS
T06055
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109934543
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
109934543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
109934543
NCBI-ProteinID:
XP_048455990
LinkDB
All DBs
Position
8:complement(13779307..14091818)
Genome browser
AA seq
1611 aa
AA seq
DB search
MSITRGHRFKLKGSTSSRYGQQINTQQVPGTSRTVKHLSNGNGQLTSNALFNGNGQARVQ
NRFTTNGQTLVENEHALLRGANLTTSIGTIKIVFTPTICKRQCLNGKCYNNCKKGDPTTL
YSENGYGPVSKSGFRIYFCQIPCLNGGYCIGRDKCRCPSNSTGKFCHLPVPPEKQTVSKT
APIRSSVSQSVYTLPLSNQQVVMLPSLVNIHVNHPPEATVQIHQVARVKNAPDSPLKNSI
KHSQEQQSTHSVQQRSQLNANGNINGQPKTQPMLQTPSRTLNVGRCFQETVDGQCGKPLP
GLTKQDDCCGSVGLSWGFHKCTKCPPKPEYPKIQNGQVECPLGYKKVNQTSCQDINECLL
SGMCQNANCLNTRGSYRCTCKPGYMLDTSRSHCISDKAVSVEKGTCFRSLSRRNCSLPLS
QQITKQICCCSRVGKGWGKNCDKCPLPGSAVFDEICPAGHGYHYSRSHVQISVRPAEEHE
LAQITSEQYLDSQQSTIKDSDLTSKEKDEFVRLEGYDTTIKTPQPFAPAHIPRIDAYPVE
VLVKTSPPTLVQIVPEPTPRQVASVFATEISVVNTCDISPNICGPGRCINQQVGYLCNCD
PGYQLNDQKTKCVDIDECWQIPQFCSYGRCENTLGSYRCICSTGFVLNQQGADCIDINEC
ERDPCEGKGHCINTAGTYSCSCYAGYTLAISQDKRTCQDINECAQAHLCHRGRCINTPGS
YHCECEEGYIMTTPGQCNDIDECDSPSTCPTGECINTLGSFECVSCSAGYRGMNGRCVDE
NECLTFDICANGNCINVDGSYQCSCNQGFEPVNNLKSCRDIDECVSFDVCLNGLCTNTEG
SYECSSCSLGYKLSEDRHRCEDTNECLSKDVCGPNGECVNNEGSYFCICARGFTNTPDGT
GCQDINECLTSDICGPNGECINKEGGSYYCLCAQGYTTTTEGTACVDVNECSDDTKCSGG
QCINTDGSYMCRCDTGFTHLPEAEQCIDIDECSLYGSSVCGVWKCENTIGSYQCIVRCQH
GFQRTAIGECIDVDECMNGTICGAHGYCENTDGSFRCHCDQGFEIPPGGQGCVDINECEM
MNGVCGTALCENYEGSFFCVCMDENEDFDPARGQCHPRVTMEQARESMMPAPAKGDLKEC
YYNLNDENSCDNLLSRNITKEECCCTVGVGWGDNCEVHPCPIINTDEYNEICPEGKGFIP
FQIGSFSFGSQSYGDADECTMFGSEICKNGHCVNNIGDYACYCDTGFYYNNVRLECVDID
ECQDENTCVNGECVNTPGSFNCFCSPPLTLDVTSKKCINGTELGVNSEEVDTYLDICWQG
VTEDDICSKPLRTRSTTYTECCCLYGEAWGLQCAFCPSRTSVDFAQLCNIPRIFSDGSTG
LRDRPGYEYGPEIPPYGQDFQPGIGSYDNYVQPEYRPYDSQRGLEYGVGDPYLAPGYEQR
DLQPGSRYELRDPLPARQYGPIEPQYGEAYRPRNSQPGSEYSSTGYLRIPQYRPREPGRI
PLFSSSENDRSSSFEGLQAEECGILNGCENGRCVRVQEGYTCDCFDGFELDMTKMTCVDI
NECEDLSDSIPLCRNASCENTEGSYKCICLPGFVLSQYPNDCIPEIETEHQ
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattaccaggggacatagatttaagctaaaaggaagtacatcaagtagatatgga
cagcaaattaatactcagcaagtaccaggaacatcacggactgtgaaacacctatcgaat
ggaaatggacagctaacctcgaatgcgttatttaatggcaatgggcaggcacgggttcag
aaccgttttacaacaaatggacaaacactagttgaaaatgaacatgcgttgctacgaggg
gcaaatctgaccaccagtataggaacaataaaaattgtcttcacaccaactatttgcaaa
cgccagtgtctaaatggaaagtgttacaacaattgcaagaaaggtgacccaaccactctt
tacagcgaaaatggatacggtcctgtgtccaaatcaggttttcgaatctatttttgccag
atcccctgcctgaatggaggatactgcattggaagggacaagtgcaggtgcccatcaaac
tcaacagggaagttctgccaccttccagtacctcctgaaaagcaaactgtgtcaaagaca
gcacctatccgttcttcagtttcgcagtctgtatatactctgcctctttctaaccaacaa
gttgttatgcttccatccttggttaatatccacgtaaaccacccaccagaggccaccgta
cagattcatcaagtggcaagagttaagaatgcacctgactctccactcaagaacagcata
aaacattcgcaggagcaacaatcgacccattcagttcaacaaaggtcacagcttaacgct
aatggaaacataaatggccagcccaaaacacaaccaatgctacagacaccatccagaact
ctgaatgtgggaagatgcttccaggaaacagttgatggccagtgtggaaaaccacttcca
ggtctcacaaaacaggatgattgttgtgggagcgtaggactatcatgggggttccataaa
tgtacaaaatgtcctccaaaaccagaatatcccaagatacagaatggccaggttgaatgt
cctttgggctataaaaaagtgaaccaaacaagttgtcaagatatcaacgaatgcctgctg
tcaggaatgtgtcaaaatgctaactgcttgaacaccagaggtagctacagatgtacgtgt
aaaccagggtatatgttggatacatcaaggagccattgcatctcggacaaagctgtttcg
gtagaaaaaggaacttgtttcagatcactgtccagaaggaactgctcactgcctctttct
cagcagatcacaaaacagatctgctgctgtagccgcgtgggcaaaggatggggtaaaaac
tgtgacaagtgcccgctccctggctcagctgtctttgatgaaatctgtccagcgggtcat
ggctatcattactctaggtctcacgtccagatttcagtgagacctgctgaagaacatgaa
ttagctcagattacctctgaacaatatcttgacagtcagcagagcaccatcaaggattcc
gatttaacttcaaaggaaaaagatgaatttgttaggttagaaggatatgatacgacaata
aaaactcctcaaccctttgcacctgctcatattccaagaattgatgcatatccagtggaa
gtactagtgaagaccagcccacctactttggtgcaaattgttcctgaacctaccccaaga
caggtggcttcggtatttgcaacagaaatttcagttgtaaatacatgtgacatttcacca
aacatttgtggtccaggacgttgcatcaatcagcaagtgggatatttgtgtaactgtgac
ccaggttatcagctgaatgatcagaaaacaaagtgtgtcgacattgatgaatgctggcaa
atcccacagttttgtagctatggacgatgtgaaaatacactgggaagctatcgatgcatt
tgttcgacaggttttgtgctgaaccaacaaggcgctgactgcatagatataaatgagtgt
gaaagggacccatgtgaaggaaaaggccattgcatcaatacagcaggaacatactcctgt
tcctgctatgctggctatactttagccatttcacaagacaaacgaacctgccaagatata
aatgaatgtgctcaggctcatttgtgccatagaggacgttgtatcaacaccccaggttct
tatcactgtgaatgcgaagagggttacatcatgactacaccaggacagtgtaacgatatt
gatgaatgcgatagcccaagtacctgtcctactggagaatgcatcaatactctcggttcc
tttgaatgtgtcagctgttcagctggatacagaggaatgaatggaagatgtgtagatgag
aatgaatgcttaacgtttgacatttgtgccaatggaaattgtataaatgtggatggatcc
taccaatgcagttgtaaccaagggtttgaaccagttaataacctgaagagctgcagagac
atcgacgaatgtgtatcctttgatgtttgtctcaatggactttgcacaaacactgagggt
tcttatgaatgttcatcctgcagtcttggatataaactatcagaagacagacacagatgt
gaagatacgaatgaatgcttgagcaaggatgtctgtggtccaaacggagaatgtgttaac
aatgaaggatcctatttctgcatttgtgccaggggttttaccaatactcctgatggtaca
ggctgccaagatattaatgaatgcttgaccagtgacatctgtggtccaaatggagaatgt
ataaacaaggaaggaggatcttattactgtctttgtgctcagggctataccactactact
gagggaaccgcctgtgtagatgtgaatgaatgcagtgatgatactaaatgttcagggggc
caatgcataaatacggatgggtcatatatgtgtagatgtgatacaggcttcacgcattta
cccgaagcagaacaatgtatagatatcgatgagtgcagtttatatggcagctcggtctgt
ggagtctggaaatgtgagaatacaatagggtcctatcagtgcattgtaagatgccaacat
ggtttccaacgtacagcaattggagaatgcattgacgttgatgagtgtatgaatggaact
atctgtggtgctcacggatattgtgaaaatacagatggatccttccgttgccattgtgat
caaggttttgagattccaccaggaggtcaaggatgtgtggatattaatgaatgcgagatg
atgaatggagtttgtggaacagccctgtgtgaaaattacgaaggatccttcttttgtgtg
tgcatggatgagaacgaagactttgacccagcaagagggcagtgccaccctcgtgtaaca
atggaacaagcacgagagtccatgatgccagctcctgcaaagggagatttgaaggaatgc
tactataatctgaacgatgagaactcctgcgataatttgctatcccgaaatatcactaaa
gaggaatgctgctgcacagttggagttggttggggtgataactgtgaagtccatccttgt
cccattatcaacacagatgaatataacgaaatttgtccagaaggaaaaggctttattcca
tttcagatcggttctttcagctttggatcacaaagctatggagatgcagatgaatgcaca
atgtttggatcagaaatctgcaagaatgggcattgtgtaaataatataggtgactacgcc
tgttattgtgacactggattttactataacaatgtacggctggaatgtgttgatattgat
gagtgtcaagatgaaaatacatgtgtgaatggagagtgtgtcaatacaccaggatctttt
aactgcttctgcagcccaccacttacactggatgtaaccagtaagaagtgtataaatggc
acagaattaggagttaactctgaagaggtagatacatatctggatatatgctggcaaggg
gtgacggaggatgacatctgtagtaagcctttgaggaccagatcaacaacctacactgaa
tgttgctgcttgtatggagaggcctggggtctacaatgtgctttctgtccctccagaaca
tcggttgactttgcacagctttgtaatattcctaggatatttagcgatggatcaactggg
ctccgggatagacctggttatgaatatggcccagaaataccaccctatggtcaggatttc
caacctggaattggatcctatgacaattacgttcagcctgaatatagaccatatgattcc
caacgggggctagaatatggagtgggagatccctatcttgcaccgggatatgaacagaga
gatctacaacctggctcaaggtatgaactgagagatcctcttcctgctcgtcaatatggc
ccaatagaacctcaatatggtgaagcatatcgaccaagaaattcacaacctgggtctgag
tatagttctacaggatatttacggattccacagtaccgtcctcgggagcctggaagaatc
ccgctgtttagtagcagtgagaatgatcgttccagtagttttgaaggcttacaagcggaa
gagtgtggaattctgaacggctgtgaaaatgggcgatgtgttcgagtacaggaaggatac
acctgtgattgttttgatgggtttgagcttgacatgacaaaaatgacttgtgtagatatt
aatgaatgtgaagatctgagtgacagcataccgctctgccggaatgcaagctgtgagaac
acagaaggatcatataagtgcatctgtttaccaggctttgtgctttcccaatatcctaat
gactgtataccagaaatagaaacagaacatcagtaa
DBGET
integrated database retrieval system
