Rhincodon typus (whale shark): 109934544
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Entry
109934544 CDS
T06055
Symbol
wdfy3
Name
(RefSeq) WD repeat and FYVE domain-containing protein 3
KO
K22262
WD repeat and FYVE domain-containing protein 3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109934544 (wdfy3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109934544 (wdfy3)
Membrane trafficking [BR:
rtp04131
]
Autophagy
Aggrephagy
Scaffold proteins
109934544 (wdfy3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beach
Arm_4
Beta-prop_WDR3_1st
FYVE
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
NBCH_WD40
WDR55
Beta-prop_EML
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_VPS8
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Laminin_G_3
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
DUF4704
Beta-prop_IP5PC_F
ASA1
PAC11
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
DSE1_N
Beta-prop_NOL10_N
UBR4_TPR
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
CFAP251_N
Motif
Other DBs
NCBI-GeneID:
109934544
NCBI-ProteinID:
XP_048460451
LinkDB
All DBs
Position
1:107940415..108273093
Genome browser
AA seq
2904 aa
AA seq
DB search
MNMVKRIMGRPRQEECSPQDNALGLMHLRRLFMELCHSPRHMTQKEQEEKLYMMLPVFNR
VFGNAPPGTMMEKFSDLLQFAAQVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEES
SRGWMLLTTINLLASSGQKTVDYMTTMSLPSTLVKCLYLFFDLPHVPDAPGGAQTDLPLS
ERRALLQKVFVQILVKLCKYVSPAEELAQKDDLQLLFSAITSWCPPHNILWRKSAGEVLM
IISRHGLSLNVVKYIHEKECVATCIQNMQQSEDLLPLEIVEMFAGLSCFLKDSSDISQVL
LDDFRSCQGYQFLCDLLLRLEQINEPDAKEAVKDLVQLVTSLTIYGINELRSTGITSGAP
FLLPGFAVPQPSGKGRTVKNIQAFSVLQIAFLKAKSSHLARIILDAISDLYVADNANYFI
LESQHTLSQFAEKISKAPEVQLKYFEMLEFIIFSLNYIPCKELISISILLKSSTSYQCSI
TAMKTLAKFARHDPIFRDVYREVGLLEVMVNLLHKYAALLKEPIQSFNEPEYKANSSFEE
RKQLALLVMETLTVLLQGSNTNAGVFREFGGARCVHNIVKYPQCREPALMIIQQLILSPS
GEDDMGTLLGLMHTASSAELQLKTDILTALLTVLRESHRTRTVFRKVGGFVYVTSLLVAL
ERSLSYEPKGVWENVNSDQAFELVHTVICTLTAAMRYEPANSHFFKTEIQYEKLADALRL
LGCFSNRRQLDSVTCCPSNIQPFQRMLEDDAPLESVCPTLKYCSKVFSCLYKMATDSFDS
LAEQVPPCLTHETSLPSPWSTPVLSRKRPGYHTVSTPPVFPAKSVTEVKLQNALTSLHSS
DPVIIHPGAVLAMLDLLVSVSVSEQFEHTIDLQLAVANILQSLIHSERNQQVMCEAGLLA
RLLQRCSSALSDEDHPLHPPLQRMFERLASQSLEPVVLREFLRLGNPLNCGAWDKKLINV
YRIHKPSSLSCEADIRGNMTTSLDGFGSDIVFGLNEDNTHYRISKSLLKGTEGSTVPLTR
VKCLVSMTTPHDIRLHGSSVTPAFVEFDTALEGFGCLFLPSLAPHNAPNIAATTAGGVND
GAVTSGLGTGERFFPPPSGLTYSTWFCIEKLSTPMSNHPVRLLTLVRRSNSSDQHFICLA
VVFSGKDRSLLVSTKEELLQNYVDDFSEESSFYEILPCCARFRCSDLINEGQWHHLVLVM
SKGMLKNSTATLYVDGQHINTVKLHYIHSSPGGSGSTNLPVVSTVYGYIGTPPAQRQISS
LVWRLGPTHFLEEVLPASSISIIYELGPNYVGSFQAVCVPCKDSKSEVIIPSPISLIPEE
KVSFGLYALSVSSLTVARIRKNYNKVDSKTIAKQMAISSHENATPVKLLHNAAGHLNGPA
RTIGAALIGYLGVRTSVPRPVATTLQYIGGAAAILGLVAMASDVEGLYAAVKALVCVVKS
NALASKEMERIKGYQLLAMLLKKKRTLLNSHILHLTFSLVGTVDSGHETSIIPNSNGFQD
LLCDFDVWLNAPYELHLSLFEHFIELLTESSEASRNAKLMREFQLIPKLLLTLRDTSLSQ
MTIAAISNVLSLLLQGFPDSNDLLRFGQFLSSTLPTFAVCEKFIIMEAKNEEKEEGVDDD
LGGLVSANTILLRNRLLDILLKLLYTSKEKNSVNPQACEELVKIWGFDWLLMFMEEHLHP
TTVTAAMRILVVLLSNQSILAKFKEGLSGGGWLDQTDSVLTNKIGTVLGFNVGRIAGGRS
TVREINRDACHVPGFYILQSFLPKHTNVPELYFLLMALFLQQPVTELPESLQFDLDSIWT
FIFGVPASSGTVVASVHTVCSESAFLLLGMLRSMLNLPWQSEEEGSWLREYPVTLMQFFR
YLYHNVPDLAPLWTSPDFLCAFAATVFPFNIRPYSEMVTDHDDEVGSPAEEFKAFAGDTG
MNRSQSEYCNVGAKTFLTNHPARKFVFDFMRVLVIENLCLAPASKQTTLIDLLLEASPDR
STRAQQKEFQTCILDSVMDHLLAADVLLGEDATLPITSGGSYNTLVNNVFYFTQRLVDKL
WQGMFSKESKLVVDFIVQLIGQTQRWERGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWI
LADYDSEELDLTNPKTFRNLAKPMGAQTDERLAQYKKRYKDWEDPNGETPAYHYGTHYSS
AMIVASYLVRMEPFTQIFLRLQGGHFDLADRMFHSVREAWYSASKHNMADVKELIPEFFY
LPEFLLNSNNFDLGYKQNGIKLGDVLLPPWAKGDPREFIRVHRKALECDYVSSHLHEWID
LIFGYKQQGAPAVEAVNVFHHLFYEGQVDIYNINDPLKETATIGFINNFGQIPKQLFKKP
HPPKRTRSRNNGEPSGVPPSLSCTTDKIFFHHLDNLRPSLAPVKELKEPVGQIIFTDKGV
LAVEQNKVLIPPSWNKTFAWGYADLSCRVANYESDKALIVYECLSEWGQILCTICPNPKL
VVTGGTSTTICVWEMGTSKEKAKTLTLKQALHGHTDAVTCLTTSSAYHIIVSGSRDRTCI
IWDLNKLSFVTQLRGHRAPVSALCINELTGDIVSCAGTYIHVWNINGNPVVNVNTFTGRS
QQIFCCCVSEMSEWDTQNVIVTGHSDGVVRFWRMEFLQVPETPAPEETIKLPENDDSSAD
VQLDGDAQDEESSDSDLEDQCSTQDPKPKQSVSGCPANKAKGMSGRAAWFVDGDESKRWA
DQLSLDEKDGFVFVNYSEGQPKLQPQAQQQPQVQSQMHYHHHQLQQHSMQSEIKRHNQLK
QGYRWERQLVFRSKLTMHTAFDRKDNCHPAEITALGISKDHSKILVGDARGRVFSWSVSD
QPGRTAADHWIKDDGGDCCSGCSVRFSLTERRHHCRNCGQLFCQKCSRFQSEIRRLKISS
PVRVCQNCYYNLQQERGAEESSRN
NT seq
8715 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggtgaaaaggatcatgggccgtccacggcaggaagaatgtagtcctcaggat
aatgcacttggccttatgcacttgcgccgtctcttcatggaactctgtcattcaccaaga
cacatgacacagaaggagcaggaggaaaagctctatatgatgctgccagttttcaacagg
gtatttggaaatgctcctcctggcaccatgatggagaaattttcagatctcttgcagttt
gctgcccaggtatcgcgtttaatggtgactgaaattaggagaagagcctctaacaaatct
acagaggcagctagtcgtgccattgtccaatttctggagattaatcaaagcgaagaatca
agcagaggctggatgcttctcactacaatcaacttacttgcatcttctgggcagaagact
gtggactacatgactacaatgtctttgccttccactctggttaaatgcctgtacctattc
ttcgatctcccacatgtgcctgatgcccctggaggagctcagacagatttaccacttagc
gaacgacgggcactgttgcagaaagtgtttgtgcagattttagtgaaactttgcaagtat
gtgtcaccagcagaagagctagcccagaaagatgacctccagcttctgttcagtgctata
acctcttggtgtcctccacataatatcctctggagaaagagtgcaggagaggtactcatg
atcatatctcgccatggactcagtctcaatgttgtcaaatatattcatgaaaaagaatgt
gtggccacttgtatccagaacatgcagcaatcagaagatcttttacccctagaaatcgtt
gaaatgtttgctggactgtcctgtttccttaaagactccagtgatatatcacaggttctt
ttagatgattttaggtcctgccaaggttatcaattcctttgtgaccttctgctcagattg
gagcaaataaatgaacctgatgccaaagaggccgtgaaagacttggttcagttggtgacc
tcattgacaatatatgggatcaatgaattgagatctactggcataactagtggagcacct
tttcttctgccaggatttgcagtaccacaaccttctggcaaaggtcgcacagtaaaaaat
atccaagcgttctctgttcttcagattgccttcttaaaagcaaaatcaagccatcttgcc
agaatcatccttgatgccatttcagacctctacgttgcagataatgctaattacttcatc
ctagaatctcagcacacactttcacagtttgctgagaagatttccaaagcacctgaggtg
caactcaaatactttgaaatgttggagtttattatcttcagcttaaactatattccatgt
aaagaactaataagtatcagcatcttgttaaagtctagcacctcttaccagtgtagcatc
actgcaatgaagacacttgcgaaatttgctcgccatgatcctatttttagggatgtttat
cgagaagttggattgcttgaggtgatggtcaatctcctgcacaaatatgctgctctatta
aaagagcccattcagagttttaatgagccagaatacaaagcaaattcttcatttgaagaa
cggaaacagcttgccctattagtgatggagacgctgacagtactgctgcaaggatcaaac
acaaatgcaggtgttttccgggagtttggaggagcacgatgtgtgcacaacatagttaag
tacccacaatgtcgggaacctgcactgatgattatacagcaattaattttatcccctagt
ggagaagacgatatgggaacattgttaggactaatgcatactgcttcatctgcagaactg
caactcaaaactgatattctgacagctcttctcactgtgctgagagaaagtcaccgcaca
cgaacagtgttccgaaaagttgggggatttgtttatgtcacgtcgttgttggttgccttg
gagagatccttgagttatgaacccaagggagtgtgggaaaatgtgaactcagaccaagcc
tttgaactggtgcatacggttatttgtacattaacagcagcaatgcgttacgaacctgct
aattctcattttttcaaaactgaaattcagtatgaaaaacttgcagatgctttgcgtttg
cttggctgcttctcaaatagacgacagttagattcggttacttgctgtccttcaaatatc
caaccatttcaaagaatgcttgaagatgatgcaccattggaatctgtttgcccaacattg
aaatattgtagtaaagttttttcttgtctctacaaaatggccacagactcttttgatagt
cttgctgaacaagttccgccttgcttgacacatgagacttcccttccctctccttggagt
actccagttctgtccagaaaaaggccaggctatcacacagtatcaacgcctcctgtgttt
ccagccaagtctgtcacagaagtgaagctacaaaatgcgttgacttccttgcattcttct
gatccagtcataatacatcctggagctgtgcttgcaatgttagacctgttggtgtcagtg
agtgtcagtgaacaatttgagcacacaatagatcttcagcttgcagtggctaatatctta
cagtcactcatccattcagagagaaatcagcaagtgatgtgtgaagcagggcttcttgca
cgtcttctacaaaggtgtagttctgctctatctgatgaagatcatcctcttcacccacca
ctccaaagaatgtttgagagattggcttcacagtcattagaaccagtagtcctgagggag
tttctccgccttggtaacccattgaattgtggagcctgggataagaagttgatcaatgtg
tataggatccacaagccaagctctctcagttgtgaagcagatattagagggaatatgacc
acatctctggatggatttggttctgatattgtatttggcttgaatgaagataacactcac
tacaggattagcaaaagtttgctgaaagggacagaaggcagtacagtacctctgaccagg
gtgaagtgcttagtatcaatgacaacaccacatgatattaggcttcatggttcatcagtc
accccagcatttgtggaatttgatacagctctggaaggctttggctgtctgttcttgcct
agtttggctccccataatgcacccaacattgctgctaccactgcaggaggtgttaatgac
ggagctgttaccagtggacttggtacaggtgaacgattttttccaccaccttctggactg
acttattcaacttggttttgcattgagaagcttagtactccgatgagcaatcatcctgtt
agacttcttacccttgttagaagatcaaactcctctgaccaacacttcatttgccttgct
gttgtattttctgggaaagaccggtccctgctagtttcaactaaggaagaattgctgcaa
aattatgttgatgacttcagtgaagagtcatccttttatgaaattcttccctgctgtgcc
cgatttcgctgcagtgatctaattaatgagggacagtggcatcacctggtacttgtgatg
agtaaaggaatgttaaagaacagcactgctaccttgtatgtggacggtcaacatattaac
acagtaaagcttcattatatccacagttcacctggtggatcagggtcaactaatctgcca
gttgttagcacagtgtatggctacattggaacacctccagctcagcgtcagatctcttca
ttagtgtggcgtctaggacctacacatttcctggaggaagttttgcctgcttccagtatc
tctatcatttatgaattaggaccaaactatgttggtagcttccaagctgtgtgtgtccca
tgcaaggattcaaaatctgaagtgatcattccatctccaatcagtttaattcctgaggag
aaagtatcttttgggttgtatgcactgtcagtctcttcacttacagtggccaggattaga
aaaaattacaacaaggtggacagcaaaaccatagccaaacagatggccatttcctcgcat
gaaaatgctacaccagtaaaactattgcataatgctgcagggcatttaaatggaccagca
cggaccattggtgcagctcttattggatacctaggtgtgaggacctctgttcctaggccc
gttgccactacattacaatacattggtggagcagctgctattttaggcttggttgcaatg
gcatcagatgttgaaggcctctatgctgctgtgaaggctcttgtttgtgtggtaaaaagt
aatgcactggcaagcaaagagatggagaggattaagggctatcaactcttggcaatgctg
ctgaagaagaagaggactttgttgaacagtcatattctccatcttacattttcattagtg
ggaacagttgacagtggccatgagaccagtatcattcctaattctaatggatttcaggat
ttgctttgcgactttgatgtctggcttaatgcaccatatgagcttcatttgtcattattt
gagcattttattgaacttctcactgaatcaagtgaggcttctagaaatgccaagttaatg
agggaattccaattgataccaaagcttctgcttactctgagggatacatccttgtcccag
atgaccattgcagctatcagtaacgtgctcagccttttgctgcaaggctttccagacagc
aatgatctgctcaggttcggtcagtttttgtcttctacgttgcctacttttgcagtctgt
gagaagtttattatcatggaagccaaaaatgaggaaaaggaagaaggtgtcgatgatgac
ttgggtggccttgtttcagctaataccattctattgagaaacagacttctggatatcttg
ctaaagttattgtatacttcaaaagagaagaacagtgttaatccacaagcatgtgaagaa
ttggtgaagatttggggttttgactggcttctgatgttcatggaagagcacctgcatccc
actactgtcactgcagcaatgagaattcttgttgtactgctgagcaaccagtcgatcctt
gccaagtttaaggaagggctttctggaggaggctggctcgaccagactgactctgttctc
acaaataaaattggcactgtattaggtttcaatgttggcagaattgctggtggtagatca
acagtgcgtgaaataaaccgtgatgcttgtcatgtccctggtttttatatccttcagtca
ttcttaccgaaacataccaatgtgcctgaactatatttcttgttgatggcccttttcctc
caacagccagttactgaactgccagaaagcctgcagtttgatttggattctatctggaca
tttatctttggtgttcctgcttctagtggaacagtagttgcatcagttcacacagtatgt
tcagaatctgcttttctattgttgggaatgctaaggagtatgctcaatcttccctggcag
tctgaagaggaaggttcttggcttagagagtacccagtcactttgatgcagttttttcgt
tacttatatcacaatgtcccagatctagctcctctttggacaagcccagatttcctttgt
gcttttgcagcaacagtctttccctttaacatcagaccctattcggaaatggtgactgat
catgatgatgaagtcggttctcctgctgaagaattcaaggcatttgcaggtgatacaggc
atgaataggagtcaatcagaatattgtaatgtcggggcaaagactttcctcaccaaccat
cctgccaggaagtttgtatttgacttcatgcgtgtccttgtgatagaaaatttatgtctt
gcacctgctagcaaacagactactctcatagacctgctattagaggcctcacctgacaga
tcaacacgtgctcagcaaaaagaattccaaacttgcatcttagacagtgtgatggatcat
ttattggcagcagatgtcttgttaggtgaagatgcaacactaccaattaccagtggagga
agttacaatacattagtgaacaatgtattttacttcacacaacgactagtggataagctt
tggcaaggcatgttcagcaaggaatccaaacttgtggttgactttattgttcagttgata
ggacagacacaaagatgggagagaggagaaatcagtaatttccaatatctcatgcatctg
aacacattagcaggcagatcctataatgacttgatgcagtatccagtgttcccatggatt
cttgcagactatgattctgaggaactcgatcttacaaatcctaaaacatttcggaacctg
gctaaaccaatgggggctcagactgatgagagattagctcagtataagaaacgctacaag
gactgggaagatccaaatggtgaaactccagcatatcattatggtacacactactcttct
gccatgattgtagcttcttatttagtgagaatggagccattcactcaaatatttctccga
ctccagggtggccatttcgatcttgctgatcgaatgtttcacagtgtacgagaggcctgg
tactctgcatccaaacataatatggctgatgtaaaagaactcatcccagaattcttttat
cttccagagtttctcctaaactccaacaactttgatctaggttataagcagaatggcata
aaattgggagatgtgttattgccaccatgggccaaaggggacccaagagaattcatcaga
gttcatcgtaaggcattggaatgtgactatgtcagttcacacttacatgaatggatcgac
ttgatcttcggttacaagcagcaaggtgcacctgcagtagaagcagtcaatgtcttccat
catctgttttatgaagggcaggtggacatttataatatcaatgatccactgaaggaaact
gcaactattggcttcatcaataattttggacaaattcccaaacagctgtttaaaaaacct
catccaccaaaacgaacacgtagccggaataatggggaaccatctggtgtaccaccctct
ctgagctgtaccactgacaagatcttctttcatcatttggataatctccgaccatctttg
gcacctgttaaagaactgaaagaaccagtgggacagatcatttttacagataaaggtgtt
ctagcagtagaacaaaataaagtgctaattcctcccagttggaacaagacatttgcttgg
ggatatgcagatctcagttgcagagttgcaaattatgaatctgacaaggctttgatagta
tatgaatgcctgagtgaatggggacagattttatgcacaatttgtcccaaccctaagtta
gttgttactggaggaacgagtactacgatctgtgtttgggagatgggtacctccaaggaa
aaagctaaaacgctgacccttaaacaggcactccatgggcacactgatgcagtcacttgc
ttgactacttcatcagcctatcatataatcgtcagtgggtcacgagatcgaacatgtatc
atttgggatttgaataaactatcttttgtcacacaactgcgaggccacagggcaccagtg
tctgctttatgtattaatgaattaacaggagacattgtctcttgtgctggaacatatatt
catgtatggaacatcaatggaaacccagtggtgaatgtgaatacatttacaggacgcagc
cagcaaattttttgctgctgtgtatcagaaatgagtgagtgggacacacagaatgttata
gtcactggacattcagatggtgtggtcaggttttggagaatggagtttctgcaggttcca
gaaaccccagctccagaagagactatcaagcttccagaaaatgatgattcttctgcggac
gtacagctagatggggatgcccaggatgaggaaagcagtgattcagacctggaggatcag
tgcagtacccaggacccaaaacccaagcaaagcgtatctggctgtccagcaaataaagca
aagggcatgtccgggcgagcagcatggtttgtagatggagatgaatcaaagcgttgggca
gatcaactcagcctggatgagaaggatggttttgtttttgtaaattactcagaaggccag
cctaagctgcaacctcaagctcaacagcagcctcaagttcaaagtcagatgcactatcac
catcatcaacttcaacagcattcgatgcagagtgaaataaaacgccataatcagctaaaa
caaggatacagatgggagcgacagttggtattccgaagcaaattgactatgcatactgcg
tttgatcgaaaagacaattgtcaccctgcagaaattactgcattaggcatttctaaggat
cacagtaaaattctggtaggtgatgcacgaggtcgggtatttagctggtcagtgagtgat
cagccagggaggacagctgctgaccactggattaaagacgatggaggtgactgctgttca
ggatgttcagtgcgcttctctctaaccgagagacggcatcactgcagaaactgtgggcaa
ctcttctgtcaaaagtgcagtcgatttcagtctgagatcaggcgcttgaaaatctcctca
ccagtccgtgtctgtcagaattgttactacaacctgcagcaagagaggggagctgaagag
agctccaggaactaa
DBGET
integrated database retrieval system
