Rhincodon typus (whale shark): 109934591
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Entry
109934591 CDS
T06055
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
rtp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109934591 (gabra4)
04082 Neuroactive ligand signaling
109934591 (gabra4)
04519 Cadherin signaling
109934591 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109934591 (gabra4)
Ion channels [BR:
rtp04040
]
Ligand-gated channels
GABA-A
109934591 (gabra4)
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Paralog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF4396
CytochromB561_N
CnrY
Motif
Other DBs
NCBI-GeneID:
109934591
NCBI-ProteinID:
XP_048454027
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All DBs
Position
1:80006100..80062961
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AA seq
557 aa
AA seq
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MVPAKESVIRMSCSYISTLLYFIYVTACIGESSPEIKKDEKLYPENFTRILDRLLDGYDN
RLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDKRLKYDGPIEILRLNN
MMVTKVWTPDTFFRNGKKSISHNMTAPNKLFRIMQNGTILYTMRLTISAECPMKLVDFPM
DGHACPLKFGSYAYPKSEIIYTWTKGPERSVEVPKESSSLMQYDLVGQTVSSGTVKSITG
EYVVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTT
LSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQAEKAKKRAAKPPAA
SPMTSIKTVSASEVVIQHPDSNGNLRKRMNFLVQSDNLGTEKDHLENDSKSAIARPSLIG
QVPPSTITSPSSVPTPSKFGHTHASPTMPLARSTPPPPPCTPTIASLRPTPVHRQCGATL
EQNLLPSRLFGQSSKHSSPTTVVSAPALPPASPANSGTSKIDKYARILFPVTFGAFNMVY
WVVYLSKDTMEKMEGGM
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggttccagccaaggagtctgtgatcaggatgtcttgcagttacatttccactctgctt
tactttatctacgtgacagcgtgtatcggtgagagctcaccagaaatcaagaaagatgag
aaattatatccagaaaattttacacgcatactggacagactcctggacggatatgacaac
cgattgcgacccggattcgggggggctgtgactgaagtgaaaacagatatctacgtaaca
agcttcgggccagtgtctgacgttgagatggaatacacaatggatgtgtttttccgccaa
acctgggtggataagagactgaagtatgacggccctattgaaattcttcgcctcaacaac
atgatggtcactaaagtctggacacctgacacgttctttaggaacgggaaaaaatcaatt
tcccataatatgaccgctccaaataaactattcagaattatgcagaatggcacaattctg
tacaccatgagacttaccattagtgcagagtgtcccatgaaactggttgatttcccaatg
gatggccatgcttgtcctcttaagtttggaagctatgcatatcctaaaagtgagataata
tacacatggacaaaaggtcctgaaagatcagtggaggtacccaaagaatcttctagcttg
atgcagtatgatcttgttggacaaacagtatctagtggcacagttaaatccattacagga
gaatatgtggtgatgactgtctattttcacttgagaaggaaaatgggctatttcatgatt
cagacttacataccctgtatcatgacggttattctgtctcaagtatcattttggattaac
aaggaatcggttccagctcgaacagtttttggtataacaacggttctaactatgacaaca
ctaagcatcagtgctagacattctctgccaaaggtctcctatgctacagccatggattgg
ttcattgcagtttgctttgcatttgtgttctctgctctgattgaatttgctgctgttaac
tacttcacaaatatacaagccgaaaaagccaaaaaaagggcagccaagcctcctgctgca
tctccaatgacttcaataaagacagtgtctgcctcagaggttgtgattcagcaccctgat
tcaaatggtaatttgaggaagagaatgaacttcttggtgcaatcagataatcttggcact
gaaaaagatcacttggagaatgatagcaagagtgcgatagcaagaccatctctaattggc
caggtacctccctcaactattacttcaccatcttctgtgccaacacccagtaagtttggg
cacacacatgcatcccctacaatgccattggcaagaagcacaccaccaccccctccttgc
actcctacaatagcctcattgagacccactccagttcatcgccaatgtggagcaacgcta
gagcagaacctgctaccatccagactgtttggtcaatcctcaaaacattcttcacccacc
accgttgtatctgctccagctcttcctccagcttcacctgcaaatagtggaacaagcaaa
attgacaaatatgctcgcatactttttccggttacatttggtgcatttaacatggtctac
tgggtagtctacctctcaaaagacaccatggagaaaatggagggtggaatgtaa
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