KEGG   Rhincodon typus (whale shark): 109934724
Entry
109934724         CDS       T06055                                 
Symbol
wdr1
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rtp04990]
    109934724 (wdr1)
Domain-containing proteins not elsewhere classified [BR:rtp04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   109934724 (wdr1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_HPS5 eIF2A Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_RIG_1st RMC1_N Beta-prop_NUP159_NUP214 WD40_like Beta-prop_DCAF12 B-prop_COPA_B_2nd Beta-prop_WDR11_1st PROPPIN WD40_RFWD3 Beta-prop_IFT122_2nd WDR54 Beta-prop_IP5PC_F Beta-prop_VPS8
Other DBs
NCBI-GeneID: 109934724
NCBI-ProteinID: XP_020388980
LinkDB
Position
1:103454613..103505896
AA seq 608 aa
MPYELSKVFACLPQMERGVSKVLGGDPKGINFLYTNNKSVIIRNIDNPEIADVYTEHAHQ
VQVAQYAPSGFYIASGDTSGKIRIWDTTQKEHLLKYEYQPFAGTIKDICWSGDSQKVAAV
GKGKEIFGAVFQWDTGTSVGSITGHSKVVNSIAFKPNRPFRVVTGGDDYTCVFFEALPVK
FKFTMNNHTKFVNCIRYSPDGSKFASAGADGQIFIYNGKDGNQICALGGSSAHSGGVYAI
SWNSDSTHLISASGDKTVKLWDVEANSAVTTFNMGSDVLDQQLGCLWQNDHMLSISLSGY
INYLDKANPSKPLRVLKGHSKSIQALTVHTSDGKRSIYSGSHDGHITDWNAETGENDAFA
GKGHTNQVSCMVASDANEIVSCSMDDTVRFTCLRSKEYKPENAVKMDTQPKNVAVGPSGY
TVVICIEQIVLLKDKKKVFMIENLDYEPECAAIHPGGVTVAVGGKDSSVHLYSIQGTTLQ
KHSVLSPSHLGPVTALSYSPDGGTLAVCSANKVTTVFTVADNYKEEDSFYGHHAKVLCIA
WSPDNQHFATGGMDGLVFIWTLKDQNKIFKIPDTHRLYHISGVAWLNEHTLVTTSHDACV
KQWTITYN
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgccttacgaactgagtaaagtgtttgcttgccttcctcaaatggaaagaggggtttca
aaggtccttggaggtgatccaaaaggaatcaactttctttacaccaacaacaaaagtgtc
atcataaggaacattgataatccagaaattgctgatgtttataccgagcatgctcatcaa
gttcaggttgcccagtatgcacctagtgggttttacatcgcctcaggagatacttctgga
aaaattcgaatttgggatacgacccaaaaagaacacctactgaagtatgagtaccaaccc
tttgcagggacaatcaaagatatttgttggtctggagatagtcaaaaggttgctgctgtt
ggaaaaggaaaggaaatatttggagcagtcttccagtgggacacaggaacgtctgtagga
tccattactggccacagtaaagttgtaaacagcatagcttttaagccaaatcgaccattt
cgtgttgtgactggtggtgatgattacacctgcgtgttctttgaagcacttcctgtaaag
ttcaagtttacaatgaataaccatacaaagtttgttaactgcatacgatattctcctgat
ggaagcaagtttgcatcagctggtgcagatgggcagatttttatctataatggaaaagat
ggaaatcagatatgtgctcttggaggctccagtgcccacagtggaggtgtatatgccatt
agttggaattctgatagtacgcacctaatttctgcttctggtgacaagactgttaaacta
tgggatgttgaagccaactctgcagtgacaacgtttaatatggggtctgatgtactggat
caacaattgggctgcttgtggcagaacgatcacatgctgagtatttcactttctggctac
attaactatctggataaagcaaatcccagcaagcctctccgtgtcctcaaggggcacagt
aagtcaattcaggccttgactgttcacaccagtgatgggaagcgttccatctactctggc
agccatgatggccatatcactgattggaacgctgaaactggagagaatgatgcttttgca
gggaaaggacatacgaaccaagtgtcatgtatggtggccagtgacgcaaatgagattgtc
tcttgcagtatggatgatacagtccgtttcacttgtttgcgctcaaaagaatacaaacct
gaaaatgcagtaaagatggatactcaacctaagaatgtggcagttggtcctagtggctac
acagtggtcatttgcattgagcagattgtactgctaaaggacaagaagaaggtttttatg
attgagaaccttgattatgaaccagaatgtgcagcaattcatcctggtggagtaactgtg
gcagtaggaggaaaagattccagtgtgcatctatattcgattcaaggtactacactgcaa
aaacactctgttctgtctccaagccatttgggacctgtgactgcattgtcttattcacct
gatggtggaacccttgctgtctgttctgcaaataaagtcacaacagtgtttacagttgca
gataactacaaggaggaagacagcttctatgggcatcacgctaaagttctctgcatagca
tggtctccagacaatcaacattttgcaactggtgggatggatggattagtctttatctgg
accctaaaggatcaaaataaaatattcaaaataccagatactcatcggttgtatcacata
agcggtgtcgcttggttgaatgaacatactctggtgacaacatcccatgatgcttgtgtg
aagcaatggaccatcacttacaactga

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