Rhincodon typus (whale shark): 109934940
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Entry
109934940 CDS
T06055
Symbol
mccc1
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00280
Valine, leucine and isoleucine degradation
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
109934940 (mccc1)
Enzymes [BR:
rtp01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
109934940 (mccc1)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl
Biotin_lipoyl_2
RimK
ATPgrasp_ST
ATP-grasp_3
ATP-grasp_5
HlyD_3
Motif
Other DBs
NCBI-GeneID:
109934940
NCBI-ProteinID:
XP_020389215
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All DBs
Position
13:29463539..29513081
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AA seq
621 aa
AA seq
DB search
MRTAKKLGVRSVAVYSEADKNSMHVTMADEAYHIGPAASQQSYLNVEKIIQVAKTAAAQA
IHPGYGFLSENTEFAERCKKEGIIFIGPPSSAIRDMGIKSTSKAIMSAAGVPVVKGYHGD
EQSDQHLMEEASRIGYPVMIKAVRGGGGKGMRIAQTKADFLEQLESARREARKSFNDDVM
LLEKFVDNPRHVEVQVFGDQYGNAVYLFERDCSVQRRHQKIIEEAPGPGISPEVRRRLGE
AAVQAAKAVNYVGAGTVEFIMDAQHNFYFMEMNTRLQVEHPVTEMITGTDLVEWQLRVAA
GEELPLTQKELSVQGHAFEARIYAEDPSNNFMPGAGPLIHLSTPVPDTFTRIETGVKQGD
EVSVHYDPMIAKLVVWGDDRTVALNKLKYCLHQYNIVGLNTNIDFLLNLAAHPEFEAGNV
HTDFIPQHYDALFPTKKATSKDVLCQAALALILHERIQTNKFKAFSHDPFSPFSNSSGRR
LNILYSRNLVLLDGQNKVNMDVSYNPDGTYSIQVDGEVFHVFGKLEKEGEATYLKCSVNG
MVSKPKVVLTDNTIHLFSMEESVQVNTPVPKYLVGIDASGSQGGAVAPMTGTIEKVFVKE
GDHVKAGDALMVMIAMKMEHT
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcggacagcaaagaagttgggtgttcgttctgttgctgtgtacagtgaagcagacaaa
aattccatgcatgtcacaatggctgacgaagcttaccacataggaccagcagcctcccag
cagagctacctaaatgtggaaaagataatccaggtagctaaaacagcagcagcccaggcc
atccacccaggctatggattcctttctgagaatacagagtttgcagaacgatgtaaaaag
gagggcatcatttttattggacctccttcttcagccattcgagatatgggcatcaagagc
acttcgaaagccataatgtcagctgctggggtgcctgtcgttaagggttaccatggtgat
gaacaatctgatcaacatttaatggaggaagccagtagaattggttatcctgtgatgata
aaagcagttcgtggtggaggtggcaagggtatgcgcattgctcaaacaaaggctgatttc
cttgaacagttggaatctgcgcggagagaagcaaggaagtccttcaatgatgatgttatg
ctgttagaaaagtttgttgacaacccaagacatgtagaagtacaagtgtttggagaccag
tatggcaatgctgtttatttgtttgagagagactgttctgtacaaagaagacatcaaaaa
attattgaagaagcacctgggcctggaattagccctgaggtgaggagaagacttggcgaa
gctgcagtccaagctgctaaagctgtcaattatgtaggagctgggacagtggaatttatc
atggacgctcagcataatttttatttcatggaaatgaacacaagattacaagtggagcac
ccagtcactgagatgataacaggaactgatcttgttgaatggcaacttcgggttgcggct
ggagaggaacttcctttgacacaaaaggaactctctgttcaaggtcatgcatttgaagca
agaatatatgcagaagatccaagtaataactttatgccaggagcagggcctttaatccat
ctgtcaacaccagtaccagatacttttacaagaattgaaactggagtcaaacaaggtgac
gaagtctctgtgcattatgatccaatgattgccaagctggtggtttggggtgatgaccgt
acagtggcactaaataaattaaaatattgcttgcatcagtataatattgtaggcttaaac
accaacatagatttcttactcaaccttgctgctcatcctgaatttgaagctggaaatgtg
catacagactttatccctcaacactatgatgcattgttcccaacaaagaaagcaactagt
aaagatgtcctgtgccaggcagcacttgctttaatactgcatgaaaggattcagactaac
aagtttaaggcattttcacatgatccattttcaccattttcaaacagtagtggcaggcga
ttgaatattctgtacagcaggaatcttgtgttgcttgatgggcagaataaggtgaatatg
gatgtgtcatataaccctgatgggacttacagtattcaggttgatggagaggtattccat
gtatttggaaaactggagaaggagggtgaagctacatacctgaaatgttcagtcaatgga
atggtttccaagcctaaagtagttcttacagacaacactattcacctgttttcaatggaa
gaatctgtgcaagttaatacccctgtgccaaagtatttagttggaattgatgcctctgga
tctcagggaggagcagttgcaccaatgactggaactattgaaaaggtgtttgttaaggaa
ggtgatcatgtcaaggctggagatgcgctaatggtaatgatagccatgaaaatggagcat
aca
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