Rhincodon typus (whale shark): 109934976
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Entry
109934976 CDS
T06055
Name
(RefSeq) uncharacterized protein LOC109934976 isoform X1
KO
K16349
natural cytotoxicity triggering receptor 3 ligand 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
109934976
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Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
ig
C2-set_2
I-set
Ig_2
V-set
C2-set_3
V-set_CD47
Gly-zipper_Omp
fn3_5
Rick_17kDa_Anti
Gly-zipper_OmpA
Gly-zipper_YMGG
Motif
Other DBs
NCBI-GeneID:
109934976
NCBI-ProteinID:
XP_020389249
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Position
17:32983730..33024952
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AA seq
1118 aa
AA seq
DB search
MYHVIRWKSKVKILLFFCEMAVRMLVEGKYLQMKVKASAEALLLCAVFALWFVRVAETLD
VTIFSNPTNVLMTENVSLECKFTGYTAFNLTSVGVQWFGPSKKEIYTFDGRDHTSKRQGA
KIFEDGLRKGDASLFLSNIQIEDEGTYTCIVFVTPLKAEKSSELQVSAEPEVHLSTDHIT
VQNGTERSVSCNVKGFYPKKLTLTWEKETTKGIEELKDHFCTGALTSMDDGTFSVSSRLR
IEPTLKDNGNEYRCIVKHHSCPKDIIRTTRLTVKEPERDSSVGAVVGAVVGSIVGAFIIC
GALLIAWFHWRSKKVPPEIIEMKPPSVIHHLEEDFIDYQVYGFRPSKIRVVLILKRRENG
NGKKILEWHSTDGNNINNVQSMCQNNQDEVQLLVNSYEEDKSFSPFEPTLSCNSNRTFKL
QGIVKVCPDVKSDNGAELILQVYHDTVSQPKSKAITLDVKAVPPKISNIVVPLHVYHNEP
AALICSIIGFKPKSLQITWQQIRKDNKVELVRLHQDRTIFATNNGNTCKYHHQISEVEYE
DKSYGITSVLVILPDILQDQDTRYICEVQHDDSDTIKQKDTILRITAPPKLDRIVCDAEK
PVAGECVTLQCQIHSFYPPGIIITWLKQGEKVTEKFEQSEPTLGIDGLYHLTTSVKSTLS
RIDVGKKYTCQVSHESLEQPLEVDWMVGQLILAPKVTEVTVDPVHPEVGKSVILSCKAYD
FYPKDNEIFWLKGFEKTKDGVEMDDIVFDRSSGSYSRWSKRTFIPTYMDHGKEFKMQILH
AGTSDKPVSSSHVLTIFGMPYVEDIKLDPPEAKYGSDLTMTCRITNFLPQDIDASWQQNG
NRVVKGITVKGPVKEKDGCFSVKSQLQIRPTAQNFNQEFSFQVSHIKLKTPVTKTTVLIL
PALSPTLSSIKVDPNSLEVNQNLTFSVTLTKYAPAAVEVKWFKNKTPCSEVINKPAEIAE
DGLFSSVTSTKFVVTEKDHECVIRCAVFHPATKEIQEKTFMLFLKGIKNEESPYSNLSKD
EGVSQITCKTPHPQAGQPVTISCTVTGSALEDSHITWYKDIYPFDETSCIENKPFETGVG
FTTALTYTPKQEDDNCHFQVDIITEMDPISRYFKLKLI
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtaccatgtgataaggtggaaatcgaaagtgaaaatacttttattcttctgcgaaatg
gctgtgcgaatgttagtggagggaaagtatctccaaatgaaagttaaggcttctgctgag
gctctcctattgtgcgctgtgttcgccttgtggtttgtccgtgtcgcagaaactttggat
gtgaccatattttcaaacccaacaaatgtcttaatgacagaaaatgtttccctggaatgc
aaatttactggttatactgccttcaacctaacaagtgttggggtccagtggtttgggccc
tcaaaaaaggagatctatacctttgatggaagggaccatacttcaaaaagacaaggagca
aagatctttgaagatggattacggaaaggagatgcttcactttttctttcaaatatacag
attgaagacgaagggacatacacttgtattgtatttgtcacacctctcaaagctgaaaag
agttcagaactacaggtgtcagctgaaccagaggtccatttgtccacagatcacattact
gttcagaatggaacagagagatctgtgagttgtaatgttaaaggattttaccctaagaaa
cttactctcacctgggaaaaggaaacaactaagggaattgaggaactaaaagatcatttc
tgcactggtgccctaacttccatggatgatggaactttcagtgtttctagtagactaagg
attgaaccaacattgaaagataatggtaatgagtacaggtgtatcgtgaaacaccattca
tgtcccaaagatatcatcaggacaactcgactcacagttaaagagcctgagagagattct
tcagttggagcagttgttggagcagttgttggaagcatagttggtgcattcattatttgt
ggagctctattaattgcatggttccattggagaagtaaaaaagttcctccagaaattatt
gaaatgaaacccccttccgtcattcaccatttggaagaagatttcatcgattaccaagtc
tatggatttagaccttcgaagattcgagttgttttaatcttgaagaggagagagaatgga
aatggaaaaaaaattttagaatggcatagcacagatgggaataatataaataatgtacaa
tcaatgtgccaaaataatcaagatgaagtgcagcttcttgtaaatagttatgaagaggat
aaatctttttcaccttttgaaccaactttatcctgtaacagtaataggactttcaagtta
cagggcatagtcaaagtctgtcctgatgtgaaaagtgataatggggctgaattaattctt
caagtttatcatgacactgtttcccaacccaagtcaaaagctataacactggatgttaaa
gcagtcccgccaaagatttcaaacattgtggtgccacttcatgtctatcataatgagcct
gcagccttgatttgttcaataattggatttaaaccaaaatctcttcaaatcacatggcaa
caaatcaggaaggataataaagtggaacttgttcgattgcatcaggacaggaccatcttt
gctactaacaatggtaacacgtgcaagtatcatcatcaaatcagtgaagtagaatatgaa
gataaatcctatggtattaccagtgtcctagttattttgccagatatactgcaagaccaa
gacacaaggtatatctgtgaggtacaacatgacgactctgacactatcaagcagaaagat
acaattctgcgaattacagccccaccaaaattggacaggatagtgtgtgatgcagaaaaa
ccagttgcaggagagtgcgtgactttgcagtgtcaaatacattctttttaccctcccgga
atcataataacatggttgaaacaaggtgaaaaagtgacagaaaaatttgaacaaagtgaa
cccactctgggaattgatggactctatcacttgacaactagtgtaaagagtacactgagc
agaattgatgttgggaagaaatacacttgccaagtaagccatgaaagtctagaacagcca
ttggaagttgactggatggttggtcaactcatattagcaccaaaggtaacagaagttaca
gttgatcctgttcacccggaggtgggaaaatcagtaatcctttcctgtaaagcttacgat
ttctatccaaaagacaacgaaatattctggctcaaagggtttgagaaaactaaagatgga
gttgaaatggatgacattgtattcgatagatcatctggttcgtactctcgatggtccaaa
aggacattcattccaacttacatggaccacggaaaagagttcaaaatgcaaattcttcat
gctgggacttcagataagcctgtctcatccagtcatgttttgacaatatttggaatgcca
tatgttgaagatatcaaacttgacccaccagaagccaaatacggtagtgaccttactatg
acatgtcgcatcactaactttctcccacaagacattgatgcatcttggcaacaaaatggc
aaccgggtagtcaagggaatcacagttaaaggacctgtgaaggagaaagatggatgcttt
tctgtgaaatctcagttacaaataagaccaactgcacaaaattttaatcaagaattttct
ttccaagtgagccatattaaattaaagactccagttacaaaaacaacagttttaatactt
ccagctttgtctcctaccttgtcttctattaaggttgatccaaattctcttgaagttaat
cagaatctaacattcagtgttacactgacaaaatatgctcctgctgcagttgaagtaaag
tggtttaaaaacaagacaccttgttcagaagtgattaacaaacctgctgaaattgctgag
gatggtcttttctcatcagttacaagcacaaaatttgttgtaactgagaaggatcatgag
tgtgtcatcagatgtgcggtgtttcatccagcaacaaaagaaattcaagagaaaactttc
atgttattccttaaaggtattaaaaatgaagaatcgccttattcaaatctatcgaaagat
gaaggggtatcacagataacttgcaagacaccacatcctcaagctggccaacctgtaaca
atttcctgcactgttacgggatctgctttagaagactcgcacatcacttggtacaaagat
atttacccttttgatgaaaccagctgcattgaaaacaaaccatttgaaactggtgtaggt
ttcaccactgcattaacttacacaccaaagcaagaagatgataattgtcacttccaagtt
gatattatcactgagatggacccaatcagcagatatttcaaactgaaattaatttga
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