Rhincodon typus (whale shark): 109935005
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Entry
109935005 CDS
T06055
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1-like isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04137
Mitophagy - animal
rtp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109935005
04137 Mitophagy - animal
109935005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109935005
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109935005
Membrane trafficking [BR:
rtp04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
109935005
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
109935005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
109935005
NCBI-ProteinID:
XP_048463127
LinkDB
All DBs
Position
17:9888241..10226091
Genome browser
AA seq
1364 aa
AA seq
DB search
MKSIDCKNAIQILTSRERGSQELGCQRCLEELVEDKTRWMQWESQKVDLPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKSGRCIHSLVGHRRTPWCVTFHPTIQGLVASGCLDGEV
RIWDLHGGSESWFTENNVAIASLAFHPMAQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDSLGHNLLTAIVNPSNQQNDDDGEVPLDNVDTAQYRQRSFLQSQPVRRTPLL
HNFLHMLSSRSSGTTTGDQSQSEESTLPAGESGRTSVYAVLRDRFSYPVQECVHHMGLVC
FCSRCSALRTSSSSSVSGEDSTPTTSSAATTSTSARTEPRIPPERPSSQPDPRIPDRPSA
FSTVNYETSGNSLRNLSAATSRRGLLGHTAYHSGGLQQSNSTPGYREQSSRLSGSDWTRT
MLNISPRSELESMPPPRTSASSVSLLSVLRQQETNAQPVYTLASEGSNVLSPGTSSSGNT
GVNSSTGEERSNNQPSVRNVLQCNLNRYFMEMDSFQDVDQRVGGESNQSQQVQEILNNNI
EPNRVGSSQQNSENTASSSGGHLSRCRACHNLLTFNHDTQRWERTTQLFSSNESSSWHVP
NNYEPLGQGSSHSPTPPSRGIMGRAHGLSGSEGRFARHGSSQQGERTMGLTFNNETGHWE
RVYSQPTSNRMSNVSQEALNQEMPEENSEENLLRRRLLESSLISLSRNDGSGSREHPIYP
DPARLSPAYYAHRIIQYLSRRDSIRQRSMRYQPNRMRASLENSASSPAQPIDGADMDFDD
FEDGGERSRHRAPRNARMTAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRA
LAGAVIGDGQSAVASNIANITYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDIS
ADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGKYVMV
GLASRRILLHPSTEHMVAQVFRLQQPHGGETSMRRVFNVLYPMPPDQRRHVSINSARWLP
EPGMGLAYGTNKGDLVICRPVASKLETEHNWEQLSEPVSSHHSNRNNERPGPNRTSWRTD
RDMGLMNAIGLQPRNPAPSVTSQGTQTPSPQLQNAETQTDRDLQEATTSGTSQASQSSLN
EAERPPVTTVNQLTEASAGTSSDWPLENASGNSSSSAQQTDMSPPASGASTATTGDAPEY
IPGEDALSRIRRLIAEGWMTAVVQREQGTTTASMGGFGNNIIVSHRIHRGSQTGNEALAR
LNPHPPTNQGRTEMDSSCSQILVDSAAPSSSSSLATGFGENNERDQTAEQLDRSGVLGDD
GSFGQQPNTSMDTDALFHSVSAYSPHIVDNIDNHGTDDRGSDRR
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcattgactgcaagaatgcaatccaaatcttgaccagccgagaacgtggctct
caagagctgggctgtcaaaggtgtctggaggagctagtggaggacaagacgcgatggatg
caatgggaaagtcagaaagtagaccttccagacagtccccgatcaacttttctcctggca
tttagcccagacaggactttgatggcctccacccatgtaaatcacaatatttacatcact
gaagttaaatctgggagatgtattcattcactagtgggtcatagaaggacaccttggtgt
gtgacctttcaccccaccatccaagggcttgtggcatctggatgtctggatggggaagtt
cgaatatgggatttgcacggaggcagtgagagttggtttactgagaataatgtggccata
gcatctttagccttccatcctatggcacaactcctattgatagctactgcaaatgagatc
cacttctgggactggagtcgacgagagccatttgcagtggtgaaaacagcgagtgaaatg
gagcgggtcagacttgtaagatttgattcactgggccataacctcctgactgcaattgtc
aatccttcaaaccagcagaatgatgatgatggtgaagttccattggataatgttgacacc
gcgcaatatcgtcagcgatctttccttcagtcacagcctgtccgtcgaactccactgctc
cacaactttctacatatgttgtcctctcggtcatctggtacaacgacaggagatcagagc
cagagtgaggagagcaccttgccagcaggtgaaagtggtaggacttcagtgtatgctgtg
cttcgcgaccgcttcagctaccctgttcaggagtgtgttcaccacatgggattggtttgt
ttttgtagccgttgttctgccctgaggacatcgtcatcctcttctgtatctggtgaagac
agtactcctactacatcctctgcagccaccacctcaacatctgcacggactgagcctcgt
attcctccagaaaggccctcatctcaaccagacccacgtattcctgaccgtccatcagca
ttcagtactgtaaactacgagacctctggcaactctctccgaaacttatctgcagccact
agtaggaggggcttattaggtcacacagcataccattcagggggtctgcaacaatctaac
tccaccccaggctatagggaacagagttcaaggttaagtgggtctgattggacaagaaca
atgctgaacatatctccaaggtcagagttggaaagcatgccaccccctagaactagtgca
tcatccgtgagcttgctttcagtgctgagacagcaggagacaaacgctcaacctgtttac
acgttagcctctgaggggagcaatgtcttgagtcccggcacaagcagtagtggtaacact
ggtgtcaacagcagcacaggcgaagagagatcgaacaaccagccgtctgtcagaaatgta
ctccagtgcaacctgaaccgctatttcatggagatggacagcttccaggacgttgatcag
cgagttggcggtgagtccaatcaatcccaacaggtgcaggagatcctcaacaacaacata
gaacctaacagggttgggtcatcacagcagaacagtgagaacactgccagttcatcaggt
ggacatcttagccgctgcagagcctgccataaccttttgacttttaaccatgacactcag
cgatgggagcggaccacacagcttttttcatccaatgagagcagctcttggcatgtgcca
aacaattatgaaccactagggcagggtagcagccattcaccaaccccaccaagtagaggg
atcatgggtagggcccatggattgagtggctcagaaggcagatttgcccgccacggctct
agccagcaaggggaacgtacaatgggtctaacatttaacaatgagacaggacactgggag
cgtgtgtatagtcaaccaacatcaaacagaatgtcgaatgtttcacaagaggccttaaac
caagaaatgcctgaagaaaactcagaagaaaacttgctgagaaggcgactgttggagtcc
tcacttatatctctgtctcggaacgatggttctggatcaagagagcacccaatttacccc
gatccagccaggttatcccctgcctattacgcccatcggatcatccagtatctctctcga
agggacagtattcgacagcgctcgatgcgataccagccaaatcgaatgcgagctagtttg
gaaaattcagcaagcagcccagcccagcccattgatggtgctgatatggattttgatgat
tttgaggatggaggggaacggtcacgccaccgagctccaagaaatgcaagaatgacagcc
ccatcgctgggacgctttgttcctcggcgatttctactgcccgaataccttccttatgca
ggcatcttccatgaacgaggacagcctggattagccactcattcctctgtcaatagagcc
ttggcaggtgctgtgataggtgacggacagtctgcagtggccagtaatattgccaatatc
acttatcgcctccagtggtgggatttcaccaaatttgatcttccagagatcagcaatgcc
tcagtcaatgtcctggtccaaaattgcaagatctacaatgacgcaagctgcgatatttca
gcagatgggcagcttctggctgcatttattccgagtagtcagcgtggatttccagatgaa
ggcatcttagcagtctattcccttgccccacataacctgggagagatgttgtatactaag
cgatttggcccaaatgctatttctgtcagtttgtctccaatgggcaagtacgtaatggtt
ggcctggcctcccggcgcatcctgctgcacccatccactgaacatatggtggcacaagtc
ttccgattgcagcaaccccatggtggagaaacctcaatgaggagggtttttaatgttttg
tacccaatgccgccagaccagagaagacatgttagtataaactcagcacgttggcttccg
gaacctgggatgggtctggcatatggaaccaataagggagacctagtgatttgccggcct
gttgcatcgaaattggagaccgaacacaactgggaacaactgtcagagcctgtttcctcc
caccacagcaacaggaacaatgagaggcctgggccaaaccggacgtcatggaggacagac
cgagatatgggactcatgaacgctattggtctgcagcctcgcaatcctgccccttctgtg
acctcacaaggaacccaaacgccatctccacaactgcagaatgcagagacccaaaccgac
agggatttgcaggaagctaccacttcagggaccagccaggccagtcagtcttcgctgaat
gaggcagagcgaccaccagtgaccacagttaatcaactgacagaggccagtgcaggaaca
agttctgattggcccttggagaatgcaagtggcaactcctcctcctccgcacaacagacg
gatatgagccctccagcatcaggagccagcactgctactaccggagacgcaccagagtac
attccaggtgaagacgccttgtctcgcatccgccggctgattgctgaaggttggatgacg
gcagttgtgcagcgagaacaaggaaccaccaccgcctcgatgggagggtttggaaacaac
atcattgtcagtcatcggatacaccgaggctcacagaccgggaacgaagcactggcgaga
ttaaacccacacccgcctaccaaccaaggcagaacagaaatggacagtagttgcagtcag
attctagtggactctgctgcaccgagcagctccagcagcttagctacaggatttggagaa
aataacgaaagggatcagaccgcggagcagctcgacaggagtggcgtccttggggatgat
gggagctttggtcaacagcccaacacttctatggacacagatgcccttttccactctgtc
agcgcatatagcccgcatattgttgacaatattgataatcatggcactgacgacaggggc
tcagacaggaggtag
DBGET
integrated database retrieval system
