Rhincodon typus (whale shark): 109935014
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Entry
109935014 CDS
T06055
Name
(RefSeq) alpha-internexin-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109935014
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
109935014
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
ATG14
Motif
Other DBs
NCBI-GeneID:
109935014
NCBI-ProteinID:
XP_020389282
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All DBs
Position
34:12081092..12087660
Genome browser
AA seq
959 aa
AA seq
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MNYSWDSVGTSPHRKVYTDPSKNLARTLSYSSPTFRAQNWSRVTGSVSSPSKRASGQGFS
SAAHRSSEIVEFSQSSLFTSEGKVLGANEKELLQGLNDRFAGYIDKVRQLEQHNKALEAE
ITDLRQKQISSTRLASIYEPEIRELRQLVQEIGSQKSQVLLEREHLAEDLQQLRAKFEEE
TRVRDELQANIQMCKKDRDAAHLMKLELEKKAQALADEIDFLKNNHEEEVADLFSQIQAS
QVGVELKDIMKPDLTGALREIRAQLEGYTTVNLQHAEQWFRTKVAKLNEAAELNNEAIQS
TRQEINEYRKQLQTKSIELETVRGTKESLEKQLSDIEERHDAELVQYQDTIQQLENELKN
TKWEMTLHLREYEDLLNVKMALDVEIASYRKLLEGEETRFGSIAGSYTPPSYTYRQVQPM
THSVYVTTKAKSTPTKAAPQYKFVEEIISETTKEVDMAELEDTIQRVISDDGSGEKFDEE
DQTKQEDEEDKDEATTAEASDEEEAERGSETKEESAEEEAIEGKEAKEDETMATGESEEK
ESTETKEESEVEEATEIKAKDESPKTKETEGQDAAEMKDKVEEETADSREEEEENTEANE
PEELETIETKDNAEQQEVKDTAEENVAEKKQGKEDSTERKESETQGRAEMKADAEEEKIA
SPKEKAKSEKQAATEEDQTEPSDTTDKRNGKEQEEDHVTQQKEESKGTSTNQKDEPQPVA
EEIAEESKDTKKPDKPEPESDKVKEEPKTDEKEAASQELAKESEKQTVKVEKVQANEVAR
VSETSEQTENFTEQPKEEKVKDKKTDVPKMEEKEASKDNTVTLEGTKTDKDSSKKQSSKE
SEEKTVKASEAEKMQEKVVSDTPESKSTQSTARTAETIINGLDIKVDKEEMDVETDNKTT
KVSTEAVQKIAEETIKSKEEIVKITVTSTTKKEVINETKKEEKSLTASSDTQNEAKEGI
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaactacagctgggattctgtgggcacttctcctcatcggaaggtgtacacagaccct
tccaagaacctggctcggaccctgagctactcatcccctaccttccgcgcccagaactgg
tccagggtaaccggtagcgttagctctcccagcaagcgggcgagtggccagggtttcagc
tcggcagctcacagatcttcggagattgtggaattcagtcagtcttctttgttcactagt
gaaggcaaggtgctgggcgccaatgagaaggagctgctgcaggggctcaatgaccgcttc
gccggctacattgacaaggtccgccaactggaacagcacaacaaggctctggaggcagaa
atcactgacctgaggcaaaagcagatctcttccacccgcctggccagcatttatgagccc
gagatcagagaactgcgccagctcgttcaggagataggcagccaaaagagccaggtcttg
ctggagagagagcacctggcagaagacctgcagcagctccgggccaagtttgaagaagag
acgcgagttcgagatgagctccaggcaaacatccaaatgtgtaagaaagacagggacgct
gctcacttaatgaaactggaactggagaagaaagctcaggcgctggcggatgagatcgac
tttctgaagaacaatcacgaggaagaggtggctgatctcttctctcagatccaagcttcc
caggtcggtgtggaattgaaagacatcatgaagccagacctgaccggagccctgagagag
atccgggcgcagctggaaggctacaccactgtgaacctgcagcacgctgagcagtggttc
cgcaccaaagtggctaaactcaacgaagctgcagaattgaataatgaagccatccagagc
accaggcaagagatcaacgagtaccgcaagcagctccaaaccaagagcatcgagctggag
acggtcagaggcaccaaagaatccctggaaaaacagctcagcgatattgaggaaagacac
gacgcagaattagtccaataccaggataccatccaacaattggaaaacgagctgaaaaac
accaagtgggagatgactctccacctgagggaatatgaagatctgctgaatgtcaaaatg
gctttggatgtggagattgcctcctacaggaaactgcttgaaggcgaagagacgagattt
ggctcaattgcaggtagctacactcctccttcatatacatacagacaagtacaacccatg
actcattcagtttatgtcacgacaaaggccaagagcactcccacaaaggctgcccctcag
tacaaatttgtggaagaaattataagtgaaacaacaaaggaggttgatatggccgagctg
gaagataccattcaaagagttatctccgacgatgggtctggtgaaaaattcgatgaggag
gaccaaaccaagcaggaagatgaagaagataaagatgaagcgacaacagctgaagcttcg
gatgaagaggaggctgagaggggcagtgaaacaaaagaagagagtgcagaggaagaagct
atagagggcaaagaagccaaagaggatgaaacaatggcaacaggagaatctgaagagaaa
gaaagtactgaaacaaaagaggagagtgaagtagaagaggcaacagaaataaaggctaaa
gatgaatctccaaaaacaaaagaaactgaagggcaggatgctgctgaaatgaaagataag
gttgaagaggaaactgcagattctagagaagaagaggaagagaatacagaagcaaatgag
cctgaagaactagaaactatagaaacaaaagacaatgctgagcagcaagaagttaaagac
actgcagaggaaaacgttgctgagaagaaacagggcaaagaagacagcacagagagaaaa
gagtctgaaacacaaggaagagcggaaatgaaggcagatgctgaagaggaaaaaattgca
agtccaaaagagaaagccaaaagcgagaagcaagcagctactgaagaagatcagactgaa
ccaagtgacactacagacaagagaaatggcaaggaacaggaggaagatcatgtgactcaa
caaaaggaggagtcaaaaggaacaagcacaaatcaaaaagatgagccccagcctgtggct
gaagaaattgcagaggaaagtaaagatacaaagaaaccagataaaccagagccagagtca
gataaagtgaaagaagagccgaaaacagatgaaaaagaagctgcttctcaggaattggca
aaagaaagtgaaaaacagacagttaaagttgaaaaagtgcaagcaaatgaagtagcaagg
gtgtcagaaacttcagagcaaacagaaaattttacagaacaaccaaaagaagaaaaagtc
aaagacaaaaaaactgatgtccctaagatggaggagaaagaagcaagcaaagacaacact
gtaacattggaaggaacgaaaactgacaaagatagcagcaaaaaacagtctagcaaagaa
agtgaagaaaaaacggtgaaagcctcagaagcagagaaaatgcaagaaaaggttgtaagt
gacactcctgaaagcaagagcacacagtctacagccagaacagcagagaccatcataaac
ggcttggacatcaaagtggataaagaagagatggacgttgaaactgacaacaaaactaca
aaagtctcaacggaagcagtgcagaaaattgcagaggaaaccatcaaaagcaaagaagag
attgtgaaaatcacagtgaccagcacaacgaaaaaagaagtgattaacgaaacaaaaaaa
gaagaaaagtccttgacagcttcatcagatactcaaaatgaagccaaagaaggtatatga
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