Rhincodon typus (whale shark): 109935083
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Entry
109935083 CDS
T06055
Symbol
arhgef16
Name
(RefSeq) rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109935083 (arhgef16)
Membrane trafficking [BR:
rtp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109935083 (arhgef16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SOS1_NGEF_PH
PH
SH3_9
RHG20_PH
PH_13
ECT2_PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
109935083
NCBI-ProteinID:
XP_020389364
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All DBs
Position
31:12243185..12284528
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AA seq
709 aa
AA seq
DB search
MSQRYSESNLEEKSQVLVLEQTFKSDFQINSDSDRLMTQSGKSSLLEVDNLALGSANSMP
SLSDLPKVVLSTDSPAALKNGQQQIIPSKLAVTTKTKMRPQSSGPSGKRDSGRREVRSMP
PTDLQYEEGSNTGSSSGTLQRNRRNMSYKVATDSLSEYSEEKKLLSPPTLPPLGEMPTVQ
PARSPGRTKRTLGRKKGPRNRSSFKDDPRLYQEVRERGLDSVPESDDDLLDDTRHLESAE
PDDKIVVQNYRPAQMTWSQLPQVLEQGILHRLPAEERKRQEAIFEIIVSEHSYQHSLTVL
VDMFKNSKELQTTMTSTEHHHLFSNIGDVQDASKRFFEDLDTRLQQNPVIRDISDIVEHH
ASHCFGAYIVYCSNEIYQQRTLERLLNSNTLFKETLKRIQRNSKCGGLPIISFLILPMQR
VTRLPLLMDTICQKTNRFQVEYAAATRALKAISKLVKMCNEGAHRMERTEQMCTIQTQLD
FGKIKAFPLISASRWLQKSGELTVFVEESGILRKVFGKQSCFLFLFNDVLIVTRKRSEES
YMVQDYAMLDQVEVEALESNESPHSPPGKAVSGGTVPRSNSNTCLFKIIMKKNSAGEMEQ
IVLATESESDRARWIHAIQGNHDDLVNKEGLPQVEIIKAFLAKQPDEMTLQQADVIIVLQ
KVDGWYRGERIRDWEMGWFPESCAKMITSRSAVQRNVQRMERLRIETDV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaggtattcagaaagtaacctggaagaaaagtctcaggtcttggtgttggaa
cagacattcaagtctgacttccagattaactctgactctgacaggttgatgacccagagt
ggtaaatcttcactcctggaagtggacaatctggcattgggcagtgccaattccatgcca
tcgctctcagacttaccaaaggtggttttgagcacagacagtccggctgcactgaagaac
gggcaacagcagattatccccagcaaattggccgtgacgaccaagactaaaatgcggcct
cagagcagtgggccctccgggaagcgggatagcggcaggagggaagtgcggagcatgcca
ccgactgacctgcaatatgaggaggggagtaatacagggagctcgagtgggacactgcaa
cgtaatcgccgcaacatgtcgtataaggtggcaacggacagcttgtctgaatactcggag
gagaagaagctgttgtctcctcccacactgccaccattaggggaaatgccaacagtgcaa
ccagctcgaagtccaggcaggaccaagcgaacattaggaagaaagaaaggacccagaaat
cgaagttcctttaaggatgatccaaggctataccaggaggtgcgggagagaggcctggac
agtgttccggagtcggatgatgatttgttggatgataccaggcacttggaatctgcagaa
ccagacgacaagattgtggttcagaattacagaccggcacagatgacatggagccagtta
ccacaggttctagagcaagggattctgcacagactgccagctgaggaacgcaagaggcaa
gaggccatctttgagatcattgtatctgagcactcctatcagcacagtctgacagtcctg
gtcgacatgttcaagaactcaaaggaactacagacgaccatgaccagcactgagcaccat
catctcttctccaacataggtgacgttcaagacgccagtaaaagattttttgaagacctt
gacacgagactccagcaaaacccggtcatccgagacatcagtgacattgtggagcaccac
gcatcgcactgttttggtgcttacatcgtctactgctcaaatgaaatctaccagcaacga
acgctcgagagattgctcaattccaacacacttttcaaggaaaccctgaagcggattcag
aggaattcaaagtgtggtggcctgcccatcatctccttcctgattctacccatgcagagg
gtgacccgactcccactcctcatggacactatttgtcaaaaaaccaaccgttttcaagtg
gagtatgctgcagccactagagcattgaaagccatcagtaagttggttaaaatgtgcaat
gagggagcgcacaggatggagcgaacagaacagatgtgtaccatccagacgcaactggac
tttgggaagattaaggccttccctctcatctccgcttcaaggtggctacagaaaagcggg
gagctgaccgtctttgtggaagaatctggaatcttgcgcaaagtgtttgggaagcaaagt
tgtttcctcttcctcttcaatgatgtgttgatcgttacccggaaacgaagtgaggagagc
tacatggtacaggactatgccatgttggaccaagtggaggtagaagcactggagagcaat
gagtctccccactctcccccgggcaaggccgtaagtggtggaaccgtccctcgcagcaac
tccaacacttgccttttcaaaataatcatgaagaagaacagcgctggtgaaatggagcaa
attgtgttagccacggaatccgagagtgaccgagctcgctggatccacgccatccagggg
aaccatgacgacctcgtcaataaagaaggcctcccacaggtggagattatcaaagccttc
ctggccaaacagccagatgagatgacacttcagcaggccgatgtgatcattgttctccag
aaggttgatggctggtaccggggagagaggatacgtgattgggagatgggctggtttccc
gagtcctgcgccaagatgataaccagtcgcagtgcagtgcaacgaaatgtccaacgaatg
gagagattgcggattgaaactgacgtctag
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