Rhincodon typus (whale shark): 109935133
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Entry
109935133 CDS
T06055
Symbol
abcb10
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109935133 (abcb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109935133 (abcb10)
Transporters [BR:
rtp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
109935133 (abcb10)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_29
AAA_16
DUF87
AAA_30
Zeta_toxin
AAA_25
nSTAND_NTPase5
RsgA_GTPase
NB-ARC
P-loop_TraG
nSTAND1
AAA_33
DUF3987
DUF7792
AAA_18
Motif
Other DBs
NCBI-GeneID:
109935133
NCBI-ProteinID:
XP_020389402
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All DBs
Position
9:complement(634103..665748)
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AA seq
676 aa
AA seq
DB search
MASRILLLSRPGLATRCLQAATKGLQWNRLPRCSSGLAAGGAEPGGGYHGNRVPASGLHP
PKQRPDAERETERSRLPTTGASVVDARRLLTLAYPERWPLSAAVGFLGVSSLVTMSAPFF
LGKVIDTIYMNPVGENVTGSLTSLCAILSGVFICGAAANAARVYLMQISGQQIVKRLRTR
LFSSILCQEIGFFDKTSTGELINRLSSDADLLGRSVTENLSDGLRAVGQAAAGVGMMFYV
SPQLAMFVLGIVPPVGVLAVFYGRYMRKLAGITQDSLADATQLAEERIGNIRTVRAFAKE
ESELRTYTEKISQVLQLARKEAVARAGFYGATGLTGNLIVLSVLYKGGLMMGDAYMTVGE
LTSFMMYAFWVGISIGGLSSFYSALMKGLGAGGRLWELYERKPEMALNVGMILQPDQFKG
AIEFRRVTFAYPTRPETQVFSELDLSIPAGSVMAVVGPSGSGKSTLMSLLLRLYDPVSGT
VIVDGHDVRSLNPFWLRKNMGAVNQEPVLFSCSIAENIAYGAAQPFELTMEDIEKAAKIA
NAYEFIRSFPKGFQTMVGEKGILLSGGQKQRVAIARALLKNPKILLLDEATSALDSENEY
LVQEALDRLMVGRTVLIIAHRLSTIQNADAVAVLDQGRIVECGTHQQLLANSDGLFRKLV
EKQTISQNNQKLVLKV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccggattctgctacttagccggcccggcttagcgacacgctgtctgcaggcg
gccaccaagggtttgcagtggaaccggctcccgcgttgtagctcgggactcgcggccggc
ggagctgaacccggcgggggttaccatggtaacagggtcccggcctcgggcctgcacccc
ccaaagcagcggcctgacgccgagcgggagacggagcggagccggctgcccaccaccgga
gcgtcagtggtggatgccaggaggctgctaaccctggcctacccggagcggtggccgctc
tcagctgctgtgggcttcttgggtgtgtccagcctggtgactatgtctgctcccttcttt
ctgggaaaggttattgataccatttatatgaatcctgttggagagaatgtaactgggagc
ctgacctcactgtgtgccatattgagtggtgtcttcatatgtggagctgctgccaatgct
gcccgtgtctacctcatgcagatttcaggacagcagattgtcaaacgtttgaggacaaga
ttgttttcttcaattctatgccaggagattgggttttttgataaaaccagcacaggagag
ctgataaaccgactttcatccgatgctgacctgcttggacgctcagtgaccgagaaccta
tctgatggcctaagagctgttggtcaagcagcagctggtgttggcatgatgttctacgtg
tcgcctcagctggctatgtttgtcctgggcattgttcctccagttggtgttcttgcagtg
ttttatggtagatacatgcgcaagcttgctggaattacccaagattcactagctgatgca
acacagcttgctgaagagcgcattgggaacatcaggacagttcgtgcttttgccaaggaa
gagtctgaactgcggacgtatactgaaaagatcagccaagtgttgcagctggccaggaaa
gaagcagtggctcgcgcagggttttatggtgcaactggtctaactggaaacctgattgtt
ctgtctgtcctgtacaagggaggcctgatgatgggtgatgcctacatgacagtgggagaa
ctcacgtcttttatgatgtatgccttctgggtgggaataagtattggaggcctcagctct
ttctattctgccttaatgaagggtcttggagcaggagggcgattatgggaactatacgag
agaaaaccggagatggcgctgaacgtgggtatgattttgcagcctgatcagtttaagggt
gccattgaatttcgcagagtcacttttgcctacccaacccgaccagagactcaagtgttc
agcgagcttgacttgtctatcccagcaggctccgtgatggctgtagtcggacccagtggc
tcaggaaaatcgacactaatgtcattgttactcagactatatgaccctgtttcaggcact
gtcattgttgacgggcatgatgttcggagtctcaatccattctggttgcggaaaaatatg
ggtgcagtgaatcaggaaccagttctattctcctgctcaattgcagagaatattgcatat
ggggcagcccagccctttgaactgacgatggaagacatagaaaaggctgccaagattgcc
aacgcctatgaatttatccgcagcttccctaagggcttccaaacgatggttggtgagaaa
ggtatcttactctcaggtggtcagaaacagagggttgcaattgctcgagctctgctcaag
aatcccaaaattctgctgctggatgaagccaccagtgcactggattcagagaatgagtat
ttggtgcaggaagctttggaccgattgatggtaggaaggactgtgctgatcattgcccat
cgcctgtcgaccatccagaatgctgatgctgttgcagtccttgaccagggcaggatagtt
gagtgtggtacccaccagcaactccttgcaaattcagatggattatttcgcaagcttgtg
gagaaacaaactatttcacaaaacaaccaaaaacttgtgttgaaagtataa
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