Rhincodon typus (whale shark): 109935226
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Entry
109935226 CDS
T06055
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00310
Lysine degradation
rtp00514
Other types of O-glycan biosynthesis
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109935226
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
109935226
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109935226
Enzymes [BR:
rtp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
109935226
Glycosyltransferases [BR:
rtp01003
]
O-Glycan biosynthesis
O-linked Gal type
109935226
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_tranf_2_4
Anp1
Aminotran_4
Pox_P35
Motif
Other DBs
NCBI-GeneID:
109935226
NCBI-ProteinID:
XP_048457988
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Position
10:11695458..11827130
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AA seq
425 aa
AA seq
DB search
MAACTHLPMSLLCLLLLVTAIADDGAHFPEEILLEESALQRPKVLLAIIARNAAHTLPYY
LGCIERLDYPKDRIALWVATDHNIDNTTAILREWLKNVQKAYHYVEWRPLDSPRYYSDEI
GPKHWSNSRFAHMMKLRQTALKTAREKWADYILFVDTDNLLTNEQTLNLMIAENLTVVGP
MLDSNTLYSNFWCGMTPQGYYRRTPDYIPIREWKHKGCYPVPMVHSTFLIDLRREATKKL
AFYPPHPDYTWAFDDIIVFAFSCKVAEIQMHICNRKRYGYLPVPLKAQESLQEDIETFVH
VLIERMSKFTNKDKSKLCHGHEIFSNEIFITSFNREDYMMFYEPRDLKAFSVEPLLIYPT
HYTGEPGYLSDTETSIIWDNDEIQTDWNRNLSRKTREQGEIGAEAQNTEALQPQTPIDTT
SRDEL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtgcacacatctccccatgtctctcctctgcctgctgctcttggtgaccgcg
attgcagacgatggggctcattttccagaggaaatcctgttggaggagtcggccttacaa
aggccgaaggttttgctggccatcatagcccggaacgcggcgcacacactgccctactat
ttgggttgcatcgagagactagactaccctaaggacagaatcgctctctgggttgccaca
gaccataacattgacaacacaacagcaatcctgcgggaatggttaaagaatgttcagaag
gcctatcactatgtggagtggagaccgctggatagtcccaggtactattctgatgaaata
gggccaaaacactggagtaattccaggttcgcacatatgatgaaactcaggcaaacggca
ctgaaaactgcgagggagaagtgggctgactacattttgtttgtagatacagacaacttg
ctaacaaatgagcagacactgaatctgatgatagctgaaaacttgaccgtggttggcccc
atgctggattctaacacattgtactcaaacttttggtgtgggatgacaccccagggatac
tacaggaggactcctgattacattccaattcgagagtggaagcacaaaggttgttatcct
gttcctatggtgcattccactttcctcattgacctgcgcagggaggctacgaaaaagctg
gcgttctaccctccacacccagactacacctgggcattcgatgacatcattgtctttgca
ttttcctgcaaagtggccgagatccaaatgcacatatgtaacagaaagcgttatggctac
ctcccagtgcccctcaaggcccaggagtccttacaagaggatattgaaacctttgttcat
gttctcattgaaagaatgagtaagtttactaacaaggacaaaagcaaactctgtcatggt
catgagatattttcaaacgaaatatttattacatcttttaacagggaagattatatgatg
ttctatgaacctcgagatttaaaagccttttcagtggagcccctgctgatttatccgacg
cactacactggggagccaggctatctgagcgataccgaaacctctataatctgggacaat
gatgaaatacaaacggactggaaccgcaacttatccagaaaaactagggagcagggagag
attggggccgaagcccagaatacagaggcactgcaaccccaaacacccattgacacaact
tctcgagatgaattatga
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