Rhincodon typus (whale shark): 109935250
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Entry
109935250 CDS
T06055
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109935250 (ybx1)
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109935250 (ybx1)
03041 Spliceosome [BR:
rtp03041
]
109935250 (ybx1)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
109935250 (ybx1)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109935250 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
109935250 (ybx1)
Spliceosome [BR:
rtp03041
]
Common components
Common spliceosomal components
General mRNP proteins
109935250 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
109935250
NCBI-ProteinID:
XP_048448992
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MFFQQRESERSGAERRARSESAGSPPAESGPTVLPSRRQPDNIMSEAETEQQPEQQPQQQ
PPPPQQQQPDKPKSPGEKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKN
NPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSRYAADRNRYRRYNPRRRG
PPRNYQQNIEGGEKGDGAETATDGENQEYQNQQHRPPYRRQRYPPYFVRRRYGRRPQYSN
QPQGEITEGGEINENQAAGEEGGKPNRGQNRFRGYRPRYRRGPPRPRPPREGSSEEDKEN
QGDGQQDQQSHPRRFRRNYNYRRRRPQNPKPKDGEETKASETPAENISAPETEQGNAE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgttctttcagcagcgggagagcgagaggagcggagcggagcggagagcgaggagcgag
agcgcagggagccccccagccgagagcggcccgactgtactaccatcccgcaggcagcct
gacaacatcatgagcgaggccgagacagagcagcaacccgaacagcaaccacagcagcag
ccgccgccgccgcagcagcagcagccggacaaacccaaatcccccggggagaagaaagtc
atcgcaacaaaggttcttggaacagtaaagtggttcaatgtacgaaatggctacggattt
atcaacaggaatgatacgaaggaagatgtgtttgtacatcagactgccataaagaagaat
aacccacggaaatatctacgtagtgttggagacggtgaaactgtggagtttgacgtagtg
gaaggtgaaaagggtgcagaggcggcaaatgtcactggtccaggtggagttccagtccaa
ggaagccgatatgctgcggaccgaaatcgttaccgtcgctacaaccctcgtcgccgaggg
ccaccacgtaattaccaacagaacatagaaggtggagagaaaggagatggagcagagaca
gcaacagatggagaaaatcaggaatatcaaaatcaacagcatcgtcctccatacagaaga
cagcgttatccaccttactttgtccgtcgccgctatggtcgccgtccacaatatagcaac
cagcctcagggagaaattactgagggtggtgaaataaatgaaaaccaagctgctggggag
gagggtggtaaacccaacagaggacaaaatcgttttaggggctaccgtccacgctaccgc
agaggaccccctcgcccacgtccaccaagggagggtagtagtgaagaagataaggaaaat
caaggggatggccaacaagaccaacagtcacaccccagacgatttcgccgcaactacaac
tataggcgtcgtcgaccacaaaaccctaaaccaaaagatggcgaggagaccaaggcatcc
gaaacaccagctgagaacatctctgctccagagaccgagcagggtaatgctgagtaa
DBGET
integrated database retrieval system
