Rhincodon typus (whale shark): 109935261
Help
Entry
109935261 CDS
T06055
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109935261 (tbc1d8b)
Membrane trafficking [BR:
rtp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109935261 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
109935261 (tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
109935261
NCBI-ProteinID:
XP_048461007
LinkDB
All DBs
Position
14:11744873..11819969
Genome browser
AA seq
1123 aa
AA seq
DB search
MWLKPEEVLLKNALKLWLTEKTHKYFVLQRRRGYGEGGGGLTGLLVGTLDTVFDSTSKVA
PYRILHQTPESQVYWSIACGANSEEINKHWEWLEHNVMAILPVFDSNEDITSFVQGKIRG
LIAEESQSASIKEEDDPEKFREALLKFDKWFGLPEQEKLVTYYSCNYWSGRVPCQGWLYL
STNFLSFYSFFLGKEVKIVISWDEISKLEKTMSVILSESIHIHSHGEDYYFSMFVHFNET
FLLMEQLADYAVKRLFDKETFETDVSLNDPLQITRRGLENRARNEYFTALFRLPREESLD
DILDCFLWIPFCHAHAFGKMFISDHYICFSSQDGSHCNVIIPLREVIGMDTPDSSDKHIS
FSTRCKITFRFTEIKDSDGLVKKLEGKLNCSASAQDALRNEEELCPKNSQEDNAFFGHDG
PPPSFAGDQSSALLKESNKTVNTEALMRVFHPQDAENLDSKMLKEKMKVQSWNIHFVEYG
HGVCMFRTKKTRDLVMRGIPEALRGELWLLFSGANNDMASHPGYYTELVERSMGTCSLAT
DEIERDLHRSLPEHPAFQSDTGISALRRVLTAYASRNPKIGYCQAMNILTSVLLLYAKEE
EAFWLLVAVCERMLPDYFNRRIIGALVDQAVFEEFIRSHLPQLTEHMTDMTFFSSVSLSW
FLTIFISVLPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMDKLLLCKDDAEAVTILNKF
FDNVTNKDSPLPPMAHHPPIGSDNQEPQTKVDITELIAESYEKYGDIQSMEVESMRRRNR
LYVIQTLEDTTRQNVLRVVSQEVMFSPKELEDLFELFKKEHFLSCYWIPHSPALKHHDSS
LPYLEQYQIDRKQYCTLFRHLSPWSHSANADLLALWSFRLLDENADCLINFKEFSCVLDV
MYNGSFTDKLKLLFKLHIPPAFTEDESAIPAASKQPEPFDEPLTQGDHLDGSNKGKVDIQ
AYLKQWHEELTRKEESIRNLPRINQSQFVQFSKTLYNLFHGDPNEEALFRAITTVTGLLL
RMEEVGRMLNSPNSPSPNKQGTIQDCQSGDRIQENQALNMSEDNAQERQSEIEWTFAFEQ
ILASLLNEPVLVSFFEKHVDIRAKIEQAKSVQLRAKRQSNAID
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaaacccgaggaagtgctgctgaagaacgccctgaagctatggctgacggag
aaaacacacaagtactttgtcttacaacgtcgcagaggatacggagaagggggcggtgga
ctaacgggcctccttgtagggacacttgatacggtgtttgattcaacttccaaagtagct
ccatatcgtattctacatcagacaccagaatcccaagtctattggtccattgcttgtgga
gccaacagtgaagaaataaataagcactgggaatggctagaacataatgtgatggcaata
cttcccgtatttgatagtaatgaagatatcactagctttgttcagggaaaaatacggggt
ctaatagcagaagagtctcaaagtgcatcaataaaggaggaagatgaccctgaaaagttc
cgtgaggcccttttgaagtttgataagtggtttggcctgcctgagcaagagaagctggtg
acctactattcctgcaattactggagtgggcgggtgccttgccaaggctggctgtatcta
agcactaactttctcagcttctattccttttttctcggcaaagaagttaagatcgtcatt
tcctgggatgaaatatcaaaacttgagaagactatgagtgttatcctgtccgagagtatt
cacattcacagtcatggtgaagactattacttttccatgttcgtacattttaatgaaacc
ttcctgttgatggagcagcttgcagactatgctgtaaagcgattgtttgacaaggaaaca
tttgagactgatgtatcactcaatgaccctttacaaataacaaggagagggttggagaac
cgagcaaggaatgaatacttcacagcactcttcagactgcccagggaagagagtctggat
gacatacttgactgtttcctttggattcctttttgtcatgcccatgcatttggaaaaatg
ttcatttcagatcattacatctgcttcagtagccaggatgggagtcactgcaatgttatc
atcccgttgcgggaggtgataggcatggacacgccagacagctcagacaagcacatctcc
ttcagtaccagatgtaaaataacattccgcttcactgaaataaaggacagcgatggcctt
gtgaagaagttggaagggaaactgaactgtagtgcaagtgcacaagacgctttgagaaat
gaagaggaattatgtccaaagaattctcaggaagacaatgccttctttggacacgatggc
cctccaccttcatttgctggtgatcaatccagtgcactgcttaaagaaagcaataaaacc
gttaatactgaagcattgatgagagtctttcatccacaggatgcagaaaatctggattca
aaaatgttgaaagaaaagatgaaagtacaatcgtggaacattcattttgtggagtatggt
cacggagtttgtatgtttcgcactaaaaagactcgagatctagtcatgcgtggaattcca
gaagcattaagaggagaactttggttattgttctcaggtgcaaataatgatatggcttct
catcccggctattataccgagttagtggagaggtcgatgggcacctgttccttggccacc
gatgagatagaacgtgatctgcatcgctcattgcctgaacacccagcgttccaaagtgat
accggcatttctgcactgaggagagtgctcacagcctatgcttcgcggaaccctaaaata
ggctactgtcaggctatgaacattttgacatctgttttactgctttatgctaaagaagaa
gaggccttttggttgctcgttgctgtgtgtgaaagaatgctgccagattacttcaatcga
cgaataattggtgctctcgtggatcaagcagtttttgaagaatttattcgaagccacctt
cctcagttgactgaacacatgacagacatgacttttttttcgtctgtctccttatcctgg
tttctcactatcttcatttctgtgttgcccatcgaaagtgcagtaaatgtcgtggattgc
tttttctatgatggcattaaggcaatcctgcagctgggcttggcagttctagattataac
atggacaagctgctactctgcaaagatgatgctgaagcagtgacgatcttgaacaagttt
tttgataatgtcactaacaaggacagccctttaccaccaatggctcatcacccccccata
ggcagtgacaatcaggaacctcaaactaaagtggatataactgaacttattgcagaatct
tatgagaaatatggtgatattcagtcaatggaagttgagagtatgcggcgtaggaacagg
ctatacgtgattcagactttagaagacactacaagacagaatgtgctgcgggttgtatct
caggaagtgatgttcagccctaaagaactggaagacctcttcgagctgtttaagaaggaa
cattttttaagttgttactggattccacacagtccagcactcaagcaccatgattctagt
ctcccatacctagagcagtaccagattgacaggaaacagtactgcacacttttcaggcat
ctgagtccatggtcccactctgcaaatgcagacctattagctctgtggagttttcggctt
ctggatgagaatgctgactgcctcatcaatttcaaagagttttcatgtgttctagatgtg
atgtataatggatcatttacagacaaactgaaattactttttaaattgcatattccacca
gcattcacagaagatgaaagtgcaattcctgcagcttccaaacagccagagccttttgat
gaaccgttgactcaaggtgatcaccttgatgggagtaacaaggggaaagttgatatccaa
gcctatttgaaacagtggcatgaggagctgacaaggaaagaagaaagtatccgaaacttg
ccccggataaatcagtcgcaatttgttcaattctccaagacgctatataacctattccat
ggagatccgaatgaagaggcactttttcgagccataacgactgtcactggccttttgctt
cgaatggaggaggtggggagaatgctgaacagtccaaactctccctccccaaataaacaa
ggtacaattcaagattgccaaagtggtgaccgtattcaggagaaccaggcattaaacatg
agtgaagataatgctcaagaaagacaatctgagattgagtggacctttgcctttgaacag
atactggcctcgctgttaaatgaaccggttttggttagtttttttgagaaacatgtagat
ataagggcaaaaatagaacaagccaaatctgttcaactaagggctaaaagacagtcgaat
gccattgattga
DBGET
integrated database retrieval system
