Rhincodon typus (whale shark): 109935291
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Entry
109935291 CDS
T06055
Symbol
med16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109935291 (med16)
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
109935291 (med16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_HPS5
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR35_TULP_N
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
109935291
NCBI-ProteinID:
XP_020389546
LinkDB
All DBs
Position
29:13441268..13472412
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AA seq
866 aa
AA seq
DB search
MGRACAVNAAGWGTPALCVLRVGRLCALDVEAAVNMDIAYVCEWEKRPKSNYCPSVQLVC
AWSCRNLVAFTTDLKNEEEQEQDLTYMIHILDTEHPWDVYSINSGHHEVITSLEWDQSGS
RLLSADADGRVKCWSMTDHLVNSWDNIVGSSVDGDPIVALSWLHNGVKLALHVEKSGASN
FGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVSLLKPSGQVLTATESLSRLRSRVA
LADIAFTGGGNIVVTTSDGSSSSPVQFYKVCVSVVNEKCKIDTELLPSLFMRCTTDSARK
EKYPAVTHLKFLTRETSEQVLLCASSLTGSIVECWSLRKEGLPVNNIFQPISPVGDKQPS
ILKWRILSATNDLDRVTAVGLPKLPISLTSTDLKVATDTKFFPGLGLALAFHDGTIHIVH
RLSLQTMGVFYSTPSQRPTDDQAIKRQRTTASSVHFKALQLSWTSLALVGIDNHGKLSML
RISPSMGHTLDMNTSLRHLLFLLEYCMVTGYDWWDILLHVQPNMVQNLVEKLHEEYTRQN
QALQQVLSTRIIAMKASLCKLSTNTLARACDFHAKLLLIAIGSTLKSLLRPHLLNTPDKS
PGERLTEICCKNTDTDIDKVMINLKTEEFVLDAWVLQSLQQLIQWVGDFVLYLLASLPNQ
GSPVRPGFSFLRDGTSLGMLRELMVVIRIWGLLKPGCLPIYTATSDTQDSMSLLFRLLTK
LWLCCRDENHTTEPDDNLIDECCLLPSQLLVPSMDWLPVNDGIIGKLQSKQLLKLQFGKP
ISVPSHFATSQLDIFARSPGYQKMDNLRRLNLGVCPTEETKSCTRCGCNTMLKSPNKSTA
VKQWEQRWIKNCLCGGLWRKVSITLS
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgcctgcgctgtgaatgcggcaggatggggcacgcctgcgctctgtgtgctg
cgggtcgggcgcctttgcgctctggacgttgaggcagcagtaaacatggatatagcgtat
gtatgtgagtgggagaagcggccgaagagcaattattgtccgtctgtacagctggtgtgt
gcttggtcctgcagaaacctggttgccttcacaacggatctgaagaacgaggaagagcaa
gaacaagatcttacttatatgattcacattttggatactgagcatccttgggatgtttac
tctattaactcaggacatcatgaagtgattacttctctggagtgggatcaatctggttct
cggttattatctgctgatgctgatggtcgggtgaaatgctggagtatgactgatcatctg
gtaaacagctgggataacatagttgggagttcagtggacggggatcccattgtagccttg
tcgtggctacacaatggtgtcaagttggccttgcatgtagaaaagtctggagcatccaat
tttggtgagaagttttctcgagtgaagttctccccttccttgacactttttggagggaag
ccaatggaaggttggattgctgtaaccattagtggtctagtgactgtgtcgttactgaaa
ccaagtggacaggttctcactgctacagagagtttatcacgtttgagaagcagagttgcc
ctggcagacattgcattcactggtggtgggaacatcgtggtgactacttcggatggcagc
agctcctctcccgttcaattttataaagtctgtgtgagtgttgtaaatgagaaatgcaaa
attgacactgaactgcttccatcactcttcatgcgttgtacgacagacagtgctcgaaag
gagaagtatccggctgtcacacatctgaaatttttaacaagagagacatctgagcaggta
ttactgtgtgcttccagcttgactggcagcattgtagaatgttggtcattaaggaaggaa
ggcttaccagtgaataacatttttcagccaatttcccctgtgggtgataaacaaccaagc
attctgaagtggagaattctatctgcaaccaatgatctggatcgagtaacagctgtgggt
ttacctaaacttccaatttcactgaccagcaccgacctaaaggtggcgacagacaccaaa
ttcttcccaggacttggacttgcattagcattccatgacggaactattcacattgttcac
aggctttcactacaaacaatgggagttttctatagcactccctctcagcgaccaacagat
gaccaagctattaaacgacagcgtacaactgcatcttctgtacacttcaaagcattacag
ttgtcctggacttcattggcactggtaggaatagacaatcatggaaagttaagtatgctg
aggatctcaccttcaatgggtcacacattagatatgaacacatcactgcgtcacctgctt
tttctactggagtactgcatggtgactggttacgattggtgggacattcttttgcacgtg
cagcctaacatggtgcaaaacctagtggagaaattacatgaggaatatacacgccagaat
caggctttgcaacaggttctgtctactcgaattattgccatgaaagcatctttgtgtaag
ctgtcaacaaacacattggcaagagcctgtgacttccatgcaaagctgttgttgattgca
attggttccacacttaaatcactccttcgaccacacctgctcaacacaccagacaagagc
cctggagaacgattgactgaaatctgctgtaaaaatactgacactgatattgataaagtt
atgataaacctgaaaactgaagagtttgtcctggatgcttgggtgttacagtcacttcag
cagctcatacagtgggttggagacttcgtgctataccttctggctagtttgccaaatcaa
ggttctccagttcggccagggtttagtttcctccgagatggcacctcgcttggaatgctc
agagaactaatggtggtgatccgaatatggggtctccttaagcctggttgtctgccaata
tatactgctacatctgacacccaagacagcatgtcactgctcttccgactgctcactaaa
ctctggctctgctgtagagatgaaaatcatacaactgaacctgatgacaatcttatagat
gaatgttgtctgcttcccagccaactgcttgttcccagcatggactggttaccagtgaat
gacggaattattggcaaattacagagtaaacagctgttaaaactgcagtttgggaaacca
atcagtgtacccagtcactttgcaacctctcagcttgatatttttgcgagatcaccaggg
tatcagaaaatggacaacttaaggagacttaatttaggagtatgtccaacagaagaaacc
aaatcctgtactagatgtgggtgcaacaccatgctgaaatcgccaaacaagtcgactgca
gttaaacaatgggaacagcggtggattaagaactgtctgtgtggggggctgtggcgcaaa
gtgtccattactctgtcctaa
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