KEGG   Rhincodon typus (whale shark): 109935353
Entry
109935353         CDS       T06055                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rtp03009]
    109935353 (wdr18)
Ribosome biogenesis [BR:rtp03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    109935353 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st NBCH_WD40 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_VPS8 WDR54 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 109935353
NCBI-ProteinID: XP_020389589
LinkDB
Position
29:complement(13024038..13189561)
AA seq 432 aa
MAASVLEVVLSCDAGGSLWNCNVWEPRSGTSLTTYRGGNTSARGLCTLAGEYLLGAQLGK
NYISVWELQRKDQLQQKIICPGVVTCLAASPNGLHVTAGIGESIYLWEVSTGNLLLTLNR
HYQDLTCIRFTDDSSHLISGGKDNLVLVWSLCSVLQVNFGHAPEPRYVWSRHTLPVTDIH
CGVGGPLSRVATASLDQTVKLWELCCGELLMSVLFDVGIMSVSLDPCEYCLFCGGNDGSI
FQVNLFTEPDLREKNFQVDKDGSQIFKGHRNQVTCLSVSMDGTLLISGSHDETVRLWDIQ
SKQCLRTISHKGPVTNAFLMVASANMFNPDSRPSLSLPKFSRYLHSSEITENEEGAAIML
SLQHNKKETQESYLKKAEELYSVMCAAADKHMLGDGENTKMRVAELEDEVKTLKKINRDL
YDFSVQVLTKQT
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggcggcgtcggtgctggaggtagtgctgagctgcgatgccggaggttctctatggaac
tgcaacgtctgggagccgcgctcggggacctcgctcaccacctatcgtggcggcaatacc
tcggcccgtggcctgtgtactctcgctggcgagtacctcctgggagcgcagctcggcaag
aactacatcagcgtgtgggagctgcagaggaaggatcagctacaacagaagatcatctgt
cctggggttgtgacttgccttgctgcatcacctaatggacttcatgttacagctgggatt
ggagagagcatctacctgtgggaggtttctacaggaaatctcctgttgacactgaacaga
cattatcaggacctgacatgtattcgcttcactgatgatagcagtcacttaatctcagga
gggaaggacaatcttgtgctggtgtggagtctgtgcagtgtcttgcaagtcaactttggt
catgcgcctgaacctcgatacgtctggtctcgccatactttgccagtgacagacatacac
tgcggagttggaggtcccttatctcgtgttgcaacagcatctcttgatcaaactgttaaa
ctttgggaattatgctgtggagaactcctgatgtctgtgttgtttgacgttggaatcatg
tctgtgagcctcgatccttgtgaatattgtctgttctgtggaggtaacgacggatccata
tttcaagtcaacctgttcactgagcctgatttgagggagaagaactttcaggttgacaaa
gatggcagtcaaattttcaagggacatcgaaatcaggtgacttgtctgtcggtctccatg
gatggaactttgctaatttcaggatcgcatgatgagacggtgagactgtgggacattcaa
agcaagcagtgcctgagaacaatcagtcataaagggccagtgacaaacgccttcctgatg
gttgcctcagccaacatgtttaaccctgacagcaggcccagtctgagtctcccaaaattt
agcagatatttacacagttcagaaattacagaaaatgaagagggagctgctatcatgcta
tctcttcagcacaacaagaaggagactcaggaaagttacctcaaaaaggctgaggagttg
tattctgttatgtgtgctgctgcagataagcatatgctgggagatggcgagaacacaaaa
atgagagtggctgagctggaagacgaagtgaagacattgaagaaaatcaatagagatttg
tatgatttttctgtgcaagttctgaccaaacagacataa

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