Rhincodon typus (whale shark): 109935580
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Entry
109935580 CDS
T06055
Symbol
xpot
Name
(RefSeq) exportin-T isoform X1
KO
K14288
exportin-T
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109935580 (xpot)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtp03016
]
109935580 (xpot)
Transfer RNA biogenesis [BR:
rtp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
109935580 (xpot)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-T
Xpo1
CRM1_C
HbrB
Motif
Other DBs
NCBI-GeneID:
109935580
NCBI-ProteinID:
XP_020389807
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All DBs
Position
18:complement(48411111..48461335)
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AA seq
965 aa
AA seq
DB search
MDEQALLGLNPNADASFRQRALAYFEQLKVSQNGWQVCAEALARGVYSDDHVKFFCIQVL
EHQIKFRYATLTGAQHQLIRQTMMTWLQAQTVSPHPEKTFIRNKAAQVFAMLFLAEYLTE
WPKFFFDILSVVGLNPRGVDLYLRILMAIDAEVVDRDIAHTAEVRTECRRNTLIKDAMRE
QCIPNLVESWYQILHTYQETNSELTCQCLEVVGAFVSWIDLNLIANDRFVNLLLSHMSVE
VLREEACDCLFEIVNKGMDPIDKTKLVESLCQVLLASGFFNTEQEDDVDFLARFSKLVNG
MGQALITSWSKLVKAGDVKNSQVTLQAVEAKVPLLLKLLVHEDDDISSNIIGFCYDYLHM
LKQLPALTEQQKANIEAIMHAVIKKLTYDEEFNFENEGEDEAMFLEYRKHLKLLLDRLAQ
VSPELLLAAVQRVFNATLENWQNTRFMEVEVALRLLFMLGEAIPASHGAHFSGDSAKASV
LQEMMHTLVTSGVSQYQHTSVTLEFFEIVVRYEKFFAVEPQHIPTVLMAFLDHRGLRNSS
PKVRSRTAYLLSRFIKSLSKHMNLYIEDILNRIQDLLVLSPSENGFQTLLSSDDQLFIYE
TAGVLIVNSEYPAERKQALMRDLLTPLMEKFKVFLEKLLTEQDGERQAALADCLNHAVGF
ASRTSKAFSNKQTVKQCGCSEVYRDCLQTFLPALSCALQKEILRSGVRTFLHRMIICLEE
EVLPFIPTASEHMLKDCEAKDLQEFIPLINQITAKFKTQISPFLQQIFMPLVQAIFEVLS
RPAEENDQTAALENQMLRRSYFAFLQTVTGSGMSEVIANQGVQNVEHVLFTVIQGAVEFP
DPIAQKTCFIILSKLVELWGGKDGLLGFEDFIYKHIVPACFLAPLKPTFDLADAQTVLAL
SECAVTLKTIHLKRGPEFIQYLQQEYLQSLQVAPEIIQEFCQALQQADGKIFKNYLKVFF
QRAKP
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaagcacttttgggtttgaacccaaatgcagatgccagtttcagacagagg
gcattggcatattttgaacagctgaaggtctctcagaatggatggcaagtgtgtgctgaa
gctttagcacggggggtatacagtgatgaccatgtaaagtttttttgtattcaagtattg
gaacatcaaattaaattcaggtatgctactctgactggggcacaacatcaacttattaga
cagaccatgatgacttggcttcaggctcaaacagtgagtccacacccagagaagactttt
atccgcaacaaagcggctcaggtctttgctatgctttttctagcggagtatcttaccgag
tggcccaagttcttctttgacattctctcagttgttggccttaatccacgaggagttgat
ctctatttgcgaatccttatggctattgatgcagaagtagtagatcgggacattgctcac
acagcagaggtaagaacggagtgtagacgaaatactttaataaaggatgcaatgagggaa
caatgtataccaaatcttgtggaatcctggtaccagatcctgcacacctatcaggaaacc
aactctgaactaacatgccagtgccttgaggttgttggagcttttgtatcctggattgac
ttgaatctgatagcaaatgacaggtttgtgaatttgttgctcagtcacatgtcagtggaa
gtcctccgtgaggaagcctgtgactgtctgtttgaaatagtaaataaaggcatggatcct
attgataagactaaacttgtagaatcgctttgtcaggtgctcctggcttctggcttcttc
aacactgagcaggaagatgatgttgacttcctggcaaggttttccaagctggttaatggg
atgggccaggctttgataacaagttggagtaagcttgtaaaagcaggggatgtgaagaac
agccaagtgactcttcaggctgtggaggcaaaagtgcctcttctgcttaagctgcttgtg
catgaagatgatgatatttcttctaatataatcggtttctgctatgactaccttcatatg
ctcaaacaacttcctgcactgactgaacagcaaaaggctaatattgaggcaattatgcat
gcagttataaagaaattaacttatgatgaagaattcaattttgaaaatgagggtgaagat
gaagccatgttccttgaatacagaaaacatttgaagttgctgttggacagattggcacaa
gtttcacctgagttacttttagctgctgtccaaagggtcttcaacgcaacgctggagaac
tggcaaaatacaaggttcatggaagtggaagtggctctgaggctgctattcatgttggga
gaggcaatcccagcgtcccatggtgcacatttctctggagacagtgcaaaagccagtgtc
ttgcaggagatgatgcacacattggtgacatctggagtgagtcagtaccagcatacatcg
gttactttggagttttttgaaatagtagttcgctatgagaagttttttgctgtagaacca
cagcacattcctactgttctgatggcgtttttagatcatagaggactacgtaatagtagc
cctaaggtgcgaagtagaacagcatacctgctctcaagatttattaagtctttaagtaaa
catatgaatctgtacatagaagatattttgaacagaatacaggatctactggtcctctct
ccttcagagaacggtttccagactctcttaagcagcgacgatcagctgtttatttatgaa
acagccggggtattaattgtgaatagtgaatacccagcagagaggaaacaggctttgatg
agggacttgctcacaccactaatggagaaattcaaagtgtttttggagaaacttctaacg
gagcaggatggggagaggcaagctgcattggcagactgcttaaaccacgcagtgggtttt
gcaagccggaccagtaaggccttcagcaacaagcagacagtgaagcagtgtggctgctct
gaagtgtacagagactgcctgcaaacattcctgccagctctaagttgcgccttgcagaag
gaaattctgcgaagtggtgttcggacgtttcttcacagaatgatcatttgcttagaggaa
gaagttcttccattcattcctactgcctcagagcacatgcttaaggactgtgaggcaaag
gacctacaggaatttattcctcttattaatcaaatcacagcaaaatttaagacacagatt
tcaccatttttgcaacaaatatttatgcctttggttcaagctatatttgaagtattatca
cggccggcagaagaaaatgaccaaactgctgcgcttgaaaaccagatgctccgcagaagt
tattttgcatttctacaaactgttacaggaagtggaatgagtgaggtcattgccaatcaa
ggtgtacagaatgtcgaacatgtcctgtttacagtcattcaaggagcagtagaatttcca
gatccaattgctcaaaaaacttgttttatcatactttcgaaactggttgaactttggggg
ggtaaagatggcctcctaggattcgaagacttcatctacaagcatattgtcccagcttgc
ttcctggcaccacttaaaccaacctttgatttagctgacgctcaaacagtcttggcttta
tcagaatgtgcggtaacattgaaaactattcatctcaaaaggggacctgaattcatccag
tatcttcagcaagaatacctgcagtcattgcaggtagccccagaaataatacaagaattc
tgtcaggcgcttcagcaagctgatggaaaaatctttaaaaattatctaaaggtattcttt
cagcgagcaaaaccttga
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