Rhincodon typus (whale shark): 109935628 Help Entry 109935628         CDS       T06055                                  Symbol nup188 Name (RefSeq) nucleoporin NUP188   KO K14311   nuclear pore complex protein Nup188 Organism rtp  Rhincodon typus (whale shark) Pathway rtp03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:rtp00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     109935628 (nup188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rtp03019]     109935628 (nup188) Messenger RNA biogenesis [BR:rtp03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      109935628 (nup188) SSDB OrthologParalogGFIT Motif Pfam:  Nup188_N-subdom_III Motif Other DBs NCBI-GeneID:  109935628 NCBI-ProteinID:  XP_048469344 LinkDB All DBs Position 28:complement(31450913..31553764) Genome browser AA seq 1442 aa AA seqDB search MKEMDKLLLTLGDIPHHAPVLLSWALLRHTLNLDESTPVIRHLGSTAIQQNVFQFMTQML KALGSGGNNCTASTARMCFYGLLSFVLTSFEEETLGDQQHLIDVACEVFTAPNLAELFWD TEPTAGIAILLDNNCGMFPQSMAPLLQLLSALISDKSTAKKVYSFLDKMTCYTEPYKHKP HDVLSHEDGTRWRRQMPKLLYPLGSGQANIRMSQGTYGHVIPAGQGFLVRWDFSYSSWTV FTCEIEMLLHVVSTADVLLHCQKVKPIIDLVHKIISTDWSITDYLLPITSRLYMLIQRLS SVLNPPTDVIASCVNTLTVLATRMPAKVWADLQHTGFLPYSVTQVTGIAQSLRAEGMQAG SYGNLLLSIERPQGEYSVTMAFLRLVTTLVKGQLGSTQSRGLLPCVVFVLKELLPTYHKW RYNIYGIREEIGCLIFELIYTILHLNPAEESQGSSLSLQSLCTHCLANTEAGQAIINIMA VGVDTIDAVMAAQPNSCGSEGSGQTLIQTIKLAFSITNNVIKLKPSSEVVSPLEQALTQH GTHGNNLIAVLAKYIYHRHDPALPRLAIQLLKRLAMVAPMSVYACLGSDAAAIRDAFLNR LQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDNAVGSKEFILGEWSCLQVILE FIDSKQQGKYWCPPLIHRAAIAFLHALWQDRRDSAMTVLRAKDQFWENLTSVLFGELPAP CNITEKSVLDTCAFTLKIICLEIYYVVRGSLDQSLKHTLKMFFEKKRYEYWSEYIKSLVT HMMETETEGVAPFLEFHMIISAWRMVLVLATNYVEVMHLCDNSLRLQLLQDVLEGTKVLL LVPSSASCLRMGSMLATLLLILLKQWKSIIVQVSKILDPLDQILESLSQSNQYFMEKTKA KIFSAIITTLQIKRLRVSDISQYSQMLLTVCETIHNEAIVLFDQTHHALTTGDAGLSDDK DCMETDCAPRLQHKDQKDGVCVLALHLSKELYEMDENGNHLFLITRKVPFLPAMLSTLEL SLRVKQNLHFAEASLHLLLVLSRTQQGAAIVAGAGVLPSICLPLLSVYQLSTNGTAQTLG SSRKSLDAPSWPGVYRLAMSLMERLLKSLRYNFLSEALDFVGVHQERILQCLDAVRKVQS LACLDEVDHTVGFILQLSNFIKEWRFHLPQLLRDVQVNLCYLCQTCTFLLHSPKVLQHYL QVKNGDSIPSAILPRQPKSVQTPMKQQNTEKEEMEQRALLKVQSSLLRILSKTLAAVRHF TPDLSQILLDQSLDLAEYDMLFVLSFTTPAFDSDVAPSFGTLLATVNVVLNMQGEIDKKK EPISLNVGPLTSTEEAKSLKSLLMFTMENCFYVLISQAVRYLKDPSVHSRDKQRMKQELS SELSTVLSSISRYSRRGTPCSPAAALLMSPPSKSSCSISKLSPENQEPLIQLVQAFVRQI QR NT seq 4329 nt NT seq  +upstreamnt  +downstreamnt atgaaagaaatggacaagttgctgctgacattaggggacataccacatcatgcaccagtg ctgctgtcttgggctttgttgcgccatacgctgaacctggatgaatcaactcctgtaatc aggcacttgggaagcactgctattcagcagaatgtgttccagtttatgacacagatgctt aaggcacttggcagtgggggaaacaattgtactgccagtactgcacggatgtgtttctat ggactgctgtcatttgtcttgacatcgtttgaagaagaaactttgggagatcagcagcac ttgattgatgttgcctgtgaggtattcacagcccctaatctggcagaacttttttgggat actgagcccacagcaggtattgctattttgttggacaataattgtggaatgttcccgcag tcaatggcaccactgttacaactactatctgcactgatatccgataaatccactgctaaa aaggtttacagttttttggataaaatgacatgttacacagagccatataagcataaacca cacgatgtactttcccatgaggatgggacccggtggaggaggcaaatgccaaagctgctt tatcctcttggttctggtcaggctaatatacgcatgtcgcagggtacgtatggacatgta attcctgcagggcagggttttctggtacgttgggatttctcatatagctcctggacagtg ttcacttgtgagattgagatgctgttacatgtcgtttcaacagcagatgttcttcttcac tgccagaaggtcaaaccgattattgatttagtacacaaaataatcagcacggattggtct attacggattatctgctgccaatcacttctcgtctgtacatgttaatccaaaggcttagt tctgtgctaaatcctccaacggatgtgattgcttcttgtgtaaataccctaactgttctg gccacacggatgccagccaaggtatgggcagatctacagcatacaggctttttaccatac tctgtgacacaagtcactgggattgctcaatccctcagggctgaaggaatgcaagctggt agttatggtaacctgctgctgagcattgagagacctcagggcgagtatagtgtcacaatg gcctttctccgactggtcacaacgcttgtcaaggggcagctggggagtactcagagtcga ggtcttctgccttgtgtggtctttgtcttaaaagagttactgccaacttaccataaatgg cgctacaatatctatggcatacgagaggaaattggttgcctaatttttgaacttatttat accatcctgcatctgaatccagcagaggaatcacaaggcagctcactcagtcttcagtct ttgtgcacgcattgtttggcaaacacagaagcagggcaagccatcataaatattatggct gttggggtggacaccattgatgcagtaatggcagcacagcctaacagctgtggatctgaa ggatcaggccagacactcattcagactatcaagttagcattttctataactaacaatgtc atcaaactgaaaccatcatcagaagtagtttcgccattggagcaggccctaacacaacat ggtacccatggcaataacttaatagcagttttggcaaagtacatataccacaggcatgat cctgcattgccgcgccttgctatccagctcctgaagagacttgcaatggtggccccgatg tcagtgtatgcctgccttggaagtgatgctgcagcaatacgtgatgcatttcttaataga ctgcagagcaagacagaggacatgcggattaaggtgatgatcctggagtttttaacagtt gctgtggagacgcagcctggtttgattgagctcttcctcaacttggaagtgaaagataat gcagttgggtcaaaggagtttatcctgggggagtggagctgtctgcaagtgatactggaa ttcatcgactccaagcaacaaggaaaatattggtgtcctcctctaatccatcgtgctgcc attgcttttttgcatgcactgtggcaggatcgtagggacagtgcgatgaccgttttgaga gccaaagatcaattctgggaaaatttgacgtctgtgctttttggagaactgccagcaccc tgtaacattacagagaagagcgtactggacacttgtgccttcaccctgaagatcatctgc ctggaaatttactatgttgtcaggggttctctggaccaatctttaaagcacacactgaag atgttctttgagaagaagcggtatgaatattggtctgagtacataaaatctcttgttacg catatgatggagacagaaactgagggggttgctccatttctggagttccatatgataatc tctgcatggagaatggtgctcgtactggctaccaactacgtggaggtgatgcatctatgt gataattcactacggctacagttattacaagatgttctagagggaaccaaagttttgctt ctggtgccttcatctgcttcatgtttgcgaatgggatctatgttggcaacactcctccta atcttgttgaaacagtggaaaagcatcattgttcaagtgtctaaaattctggacccactg gaccaaattctagagagtctgtcacagagtaaccagtactttatggagaagacaaaggca aaaatattttcagctatcataactactcttcagatcaaacggctacgagtttctgacatc tcccagtattcccaaatgctcctgactgtgtgtgagaccatacataacgaggcgattgtt ctgtttgaccaaacacatcatgcactgacaacaggagacgctggtctgtctgatgacaag gattgtatggagacagattgtgcaccacggttacagcacaaggaccagaaagatggggta tgtgtgctggctctgcatttgtccaaagaactttatgaaatggatgaaaatggcaaccac ttatttttgattacccggaaggttccattccttcctgccatgcttagtaccctggaactg agccttcgagtcaaacaaaacctacattttgcagaggcatctctgcacttgcttttagta ttatccagaactcagcagggagcagccatagtggcaggagctggtgtcctaccaagcatt tgtctgccgctcctaagcgtttaccagcttagtaccaatggaactgcccagactttggga tcctcacgcaagtctctggatgccccctcctggccaggtgtttatcggctcgccatgtca ctcatggaaagacttttaaaatcactccgctacaacttcctttcagaagctttagacttt gttggggttcatcaggagcggatattgcagtgcttggatgcagtccggaaggtgcagagc ctggcttgccttgatgaagttgatcacacagttgggtttattcttcaactctccaacttc atcaaagagtggcgttttcacctgccacagctccttcgagatgtacaggtgaacctatgt tacttatgtcagacatgtacttttctgcttcacagccccaaggtgcttcaacactatttg caggtgaagaatggtgattctattccgtctgcaattctccctcgacaaccaaaatccgtt cagactccaatgaaacaacaaaacacagaaaaagaggaaatggagcagcgtgcattgctg aaagtccagtctagtttgcttaggattctgagtaagacattagcagctgttcgacatttt acccctgatctctcccagatactgctagaccagtccctggatctggctgaatatgatatg ctctttgtcctgagctttactactccggcatttgattctgatgttgctccatcatttggt actctactagcaactgtgaatgttgtcttgaacatgcagggagagattgataagaagaag gagcccatatctttgaacgtggggccactgacttcaactgaagaggcaaagtcattaaag tcccttctgatgttcacgatggaaaactgtttctatgtgctgatttcacaagcggtccgt tatttgaaggatccatctgttcactcacgtgataagcagaggatgaaacaggaactaagt tcagaactgagtacagttttgtctagcatttctcgctattcccgtcgtggcacaccatgt tcccctgctgcggccttactgatgtctcctccaagcaaatccagctgctccatatccaag ttgagtcctgagaatcaggaaccattaatccagcttgtccaggcctttgtgcgacagatc cagagatag

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