Rhincodon typus (whale shark): 109935647
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Entry
109935647 CDS
T06055
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
rtp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109935647
04082 Neuroactive ligand signaling
109935647
04519 Cadherin signaling
109935647
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109935647
Ion channels [BR:
rtp04040
]
Ligand-gated channels
GABA-A
109935647
SSDB
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
109935647
NCBI-ProteinID:
XP_048460821
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All DBs
Position
14:complement(69084917..69273949)
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AA seq
473 aa
AA seq
DB search
MAEQVLGFFVLYSFLVIALLSKSSLTVHGFSKKHARPAPTEGKDNITIFTRILDRLLDGY
DNRLRPGLGESVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQSWKDERLKFKGPMRILPL
NNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTINAECPMHLEDF
PMDTHACPLKFGSYAYTRSEVVYVWTHGQKESVVVAEDGSRLNQYDLLGQTVGMEIIQSN
TGEYIIMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWPWDGRKAMEVQ
ELKKREPVNLAKKTNNTYNIVGTTYTLNITKDPSLATISKSAGTHTHTKLAKVEEKLLES
RKTYNSVSKVDKMSRIVFPVLFVIFNLVYWATYVSREPVIEGMIPQKKTPLKA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaagttttgggattcttcgtactctatagcttccttgtgatagcccttctt
tccaagagcagcctcactgtgcacggattttcgaagaaacatgctcgaccagcaccaaca
gaggggaaggacaacattaccatcttcacccggatcctggatcgcctgttagatgggtat
gacaataggctgcggcctggccttggagaaagcgtgactgaagttaaaacagatatctac
gttacaagctttgggccagtgtctgacacagacatggaatacaccgttgatgtattcttc
cgacagagctggaaggatgaaaggctcaaatttaaggggcccatgcgcatattgccactg
aacaacctgctggccagcaaaatatggactccagacaccttcttccacaatggcaagaaa
tcagtggcacacaacatgaccactcccaacaagctgctgaggctggtggataacggcacc
ctcttgtacaccatgaggcttacaatcaatgcagagtgcccgatgcatctggaggacttc
cccatggatacacacgcctgcccactgaaattcggcagttatgcctataccaggtctgag
gtggtctacgtctggacacatggacagaaggaatcagtagttgttgctgaggatggatcc
agattgaaccaatacgatctgttgggacagacagttgggatggagattattcaatcaaat
acaggtgaatacattatcatgacaacccacttccatctaaagaggaagattggttacttt
gtgatccagacgtacctgccctgcattatgactgtgattctctcccaggtctccttctgg
ctgaatagggaatctgtccctgcacgcactgtgtttggcgtcaccacagtgctgaccatg
accacactgagtatcagtgccaggaactccttgcctaaagttgcctatgcaacagccatg
gattggtttattgctgtctgctacgcatttgtgttctcagcattgattgaatttgcgact
gtgaactacttcaccaagcggagctggccatgggatggcaggaaagctatggaagttcag
gagctgaagaaacgggaacccgttaacctggccaagaaaaccaacaacacatacaacatt
gtggggacgacatacactctgaacatcaccaaggatcccagtctggccaccatctcaaag
agtgcagggacgcacacccacaccaaactggccaaagtggaggagaaattgctcgagagc
aggaagacctacaacagtgtcagcaaagtcgacaaaatgtcccgaattgtatttcctgtt
ctctttgtcattttcaatctggtttattgggccacatatgtcagcagagagccagtcatt
gaaggtatgattccacagaaaaagactccacttaaggcttga
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