KEGG   Rhincodon typus (whale shark): 109935654
Entry
109935654         CDS       T06055                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03410  Base excision repair
rtp04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109935654 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    109935654 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtp03400]
    109935654 (parp4)
DNA repair and recombination proteins [BR:rtp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     109935654 (parp4)
SSDB
Motif
Pfam: PARP4_MVP-ID VIT PARP VWA_3 WGR-like_PARP4 VWA BRCT VIT_2 VWA_2 BRCT_2 PTCB-BRCT KdpA
Other DBs
NCBI-GeneID: 109935654
NCBI-ProteinID: XP_048454258
LinkDB
Position
6:complement(39409248..39540179)
AA seq 1741 aa
MALFTDCVIVLNVKGLPVNERNKLKTAVKNNDGIITYVINQQCTHVIASDLNTVSSCRLK
AIQKYNIPVVNLDYVPSCIKEGKLLDVSCYKLSEPTPHTNADSNATEMQLNVEIPHEEIR
DDAENFSFISAHDSNVPPFPQDFEVAKYSIMEKNENAAGVIVVVELQVSQKNDKFPFRIS
SHLEQSHQQQKQFIFTSIAEKAEEAYDWCIQQLVAQEFTVKSNDLAAVQHLTSNKLQQFI
IEEALNTSTISNEVGLFVEMVWAEALGHLEDQLINPTSITLNDVSRAEGILLQLKKAIDD
KVEAKTLRDLMLQFCSTLLIRSETDFTVTKKKVSEKQDLCQLLRDVINASEATSWTPIPS
SLTKYHALRCQIEYVDPNSDEFLHVRTQLLNTNQSTYSVKILQIFHVARLSETKSFQSHI
GNIQQLYHASSGSNFVGILSRGLLLPKMVVENYGVERTDVGNLGSGIYFSNSISTSIKYS
KPSRTNGSRLLVICDVSLGKCKKYYKKDFTLSAPPAEYSSVHGIRKTECIYSEFEDDEFV
VYSTSQVKIRYVVQFCIDEDQLKPFHPLINVTPEETSPSTLTSADIDIDDLEVAQAPLKN
IKPGLQDSAGNVIALEEIHVEAKLMDLVAEVVVFQSYTNNNTFPIEAKYVFPLDDTAAVC
GFEAFFNKKHIIGQVKEKSQAHHEYRQAIREGHGAYLMDQAAADVFTISVGNLPANTSVI
IKITYITELSVDREYISFLLSGSLTSQQRDKALQEKTQESLKKIDVRKLEPAGGFSLNLS
IEMPFEIKEITSPTHSIKIKRTDCKAVISVDQNSCLGTGFQLLILLAEIHVPRMWVENNP
EKDSQACMLAFYPEFDVGTLSDCEAIICLDCSYSMRGLALEEAKKVALLLLRYLPTTCKF
NVITFGSDYKELFHCSQQRNSEDAVKTANNFILSVQKPKGNTDFWRPLLNLNLLAPSKRI
RNVLLISDGHLQNETLTLKTVHQNVKHTRIFTCGVGSTANRHMLRMLAQNGGGAHEIFDR
KTKFTWKAKVLSQVDRVIQPGCNSISVKWERFNLNASAPVQAPAQVHSVFSNSRLLIYGF
VPHCTQAKLSAVINDQEVCTVVSTTELQKTKGKILHRLTAKALIGDYENGSLDTNESEHE
MKKSTLKSYIIELSKEYSILTQFTSFIAIEERYEQEEDLLLGPSVRELAAKESVDILPYL
AWEQQFKHQEFIMGASRKELLQEWKVSKKSFLKKHDRGFAEACYNAKQSNALAHMECFSG
TNASPTPSEEPVSSCLVDSIPSPLYAPQRDVLNKSVKMATKEKPDVQSSKYSSSNEELGY
SLDAMGFGLESSPIFRNFGSPAHFNSGFLATGASYIKRKPFDESLFVNFPEQHQSLFGLV
SSEDASLSLGGPGFSAATVPSDICSHVYKSPCSMAEGHTEYSAGPVEHSWCSSRSPSSLL
RSQASHSRRFMASAVANRKSLSFGSKLQIPLALSSEGFGFAVSNTSQDQNMVNQKIPQSP
SMDTSLTTTDSLTTKTSSKFKKVKKFKTASDDAQRVSVHKLKKGSAEVLKIENLKLNQVT
HEGSKKHLAFGSVQREKEDTEKVLRSRNCKIPWVQLFTWQNKSGYWNFTSDLGVLFEINL
EYLTDVFLIDRGINSLGHRAAEEIVSLIATLMILQLICFTEQLEGIKFKSLLCLDQTLDS
GPTCWAIQHVKNAIAWARKTDRQYPAICSRLELGRDWESATRHLLRIDPLKKDSPLQQMF
N
NT seq 5226 nt   +upstreamnt  +downstreamnt
atggctttatttactgactgtgtgatagttctgaatgtgaaggggttgccagtaaatgag
agaaacaagttgaagactgctgtcaaaaacaatgatggaataataacttacgtcatcaat
caacagtgtactcatgttattgcttcggatctcaataccgtgagttcttgcagactgaaa
gccattcaaaagtataatattcctgttgtaaatctggattatgtgcctagctgcattaaa
gaaggtaaacttttggatgtcagctgctacaaactaagtgaaccaacacctcatacaaat
gctgatagcaatgcaacagagatgcaactgaacgtggaaattcctcatgaggagatccga
gatgatgcagaaaactttagttttatttctgcgcatgacagcaatgttcctccttttcca
caagattttgaggtggcaaagtattctataatggaaaagaatgaaaatgcagctggtgtt
atcgtggtagttgaattacaggtttctcagaaaaatgacaaatttccttttcgaatatct
tctcaccttgaacagagccatcagcagcagaaacagttcattttcacctcaattgctgag
aaagctgaagaagcctatgactggtgtatacagcaactagttgcacaggagttcacagtg
aaaagtaatgatctcgctgctgtacagcacttaacttccaacaagttgcaacagtttata
atcgaggaagctctgaataccagcacaatttcgaatgaagttggactttttgtggaaatg
gtttgggcagaagctctgggccatttggaagatcagttgatcaatccaacctccatcact
ctcaatgatgtatccagggcagaagggatccttttgcagttgaaaaaagcaattgatgat
aaagttgaggcaaaaacattgagagatttaatgcttcaattctgttccaccttgctaatc
agatctgagactgacttcacagttaccaagaaaaaagtgtctgagaaacaagatctctgt
cagctgctaagggatgtcattaatgcaagtgaagcgacttcatggactcccataccttct
tcacttactaaatatcatgcattgagatgtcaaattgaatatgtcgatccaaatagtgat
gaatttctgcatgtcagaactcagttactgaataccaatcaaagtacttattcagtgaag
attttgcagatttttcatgttgccagattaagtgaaactaagagttttcaaagccatatc
ggcaacattcagcaattgtaccatgcctcttctggaagcaactttgttggtatattgtct
agaggtttattattaccaaagatggtggtagaaaactatggggtagagcgaactgatgtc
ggcaatcttggaagcggaatttatttcagcaattcaatcagcacaagtattaaatactca
aagccaagtagaactaatgggagccgtctcctggtgatctgtgatgtttcactgggtaaa
tgtaaaaagtactataagaaggacttcaccttatctgccccaccagcagaatattcaagt
gtacatggaatacgtaaaactgaatgcatttactcagagtttgaggatgatgagtttgtt
gtttatagcacttctcaagtgaaaattagatatgttgtccagttctgcatcgatgaagac
caactgaaaccttttcatcccctaattaatgtaactcctgaagaaaccagcccttcaaca
ttgacatctgcagacattgatatagatgatttggaagttgctcaggctcctttgaaaaac
attaaacctggtcttcaggacagtgctggcaatgtgattgccctggaggaaatccatgta
gaggcaaagttaatggatcttgttgcagaggttgtggttttccaatcctacacgaacaac
aatacatttcctatagaagctaagtatgtatttcctttggatgatacagcagctgtctgt
ggatttgaggctttctttaataaaaagcacataattggccaggtaaaagagaaaagtcaa
gcacatcatgagtacagacaggccattagagaaggtcatggggcctatctaatggatcaa
gctgctgctgatgtctttaccattagtgttggcaatctacctgcaaataccagtgtcatc
attaaaatcacctatatcactgaactctcagttgatcgtgaatacatttcatttctattg
tctggaagtctgacatctcaacaacgggacaaagcattgcaagaaaaaactcaggaatct
ctgaaaaaaattgatgtgcggaaactggaaccagctggtggattctcacttaacttatcc
attgagatgccgtttgaaataaaagaaatcacatctccaacacacagcatcaaaataaag
cggacagattgtaaggctgttatctcagtggaccagaacagctgtctaggaactggtttc
cagttgctgattttattggctgaaatccatgtcccgagaatgtgggtggagaacaaccca
gaaaaagacagtcaggcctgtatgctggcattttatccagaatttgatgttggaactctt
tctgactgtgaggcaattatttgtttggattgttcctattcaatgaggggcttagctctt
gaagaagccaagaaagtagcacttcttctgctccgataccttccaaccacctgcaagttt
aacgtcattacgtttggctcagattacaaagaactctttcactgttcacagcaaagaaat
tctgaagatgcggtaaaaactgcaaataatttcattctgtccgtacagaaacccaaggga
aacacagatttttggagaccattgctgaatctgaacttgcttgccccatccaaaaggata
cgcaatgtacttttgatttctgatggacaccttcagaatgaaactcttacattgaagaca
gtacaccagaatgtcaaacacaccaggatatttacttgtggtgttggatcaacagcaaat
cgtcatatgctcagaatgttggcacaaaatggaggaggagcacatgagatttttgatcgg
aaaaccaaattcacctggaaagcaaaggttctgtctcaggtggatcgagtcattcaacca
ggctgcaattcaatttctgtgaagtgggagcggttcaatctcaatgcttcagctccagtc
caagccccggcacaagttcactctgtattcagcaattcaagattgctcatctatggcttt
gtcccgcattgtactcaggccaaactctctgctgtgatcaatgaccaagaagtttgtacc
gtggtttcaaccactgaactgcaaaagacaaagggcaagatacttcaccgcttgacagca
aaagctcttattggagattatgaaaatggtagtctggacacaaatgaaagtgaacatgag
atgaagaagtccactctgaaatcatatatcattgaactcagcaaagaatattcaattctg
actcaatttaccagttttatagccattgaagaaaggtatgaacaggaagaagacttactt
cttggcccatctgttcgggaacttgctgcaaaagaaagtgtggatattctgccatatctg
gcctgggagcaacagttcaaacatcaggaattcataatgggagcttcacggaaagaactg
ttgcaagaatggaaagtttccaagaaaagctttttaaaaaaacatgatcgaggctttgct
gaagcttgctataatgcaaaacaaagtaacgctttagctcatatggaatgtttctcgggc
acaaatgcatcacctactccttctgaagagcctgttagtagctgtctggtagattcaatt
cccagtccattatatgcacctcagcgtgatgtattaaataagtcagtgaaaatggctact
aaagaaaaacctgatgttcagtcttcaaaatattctagctcaaatgaagagttaggttat
tcattggatgcaatgggctttggtcttgaaagtagtccaatttttcgcaattttggaagt
ccagcacattttaattcaggatttttagcaactggtgcttcttatattaaaaggaaacct
tttgatgaatcattgtttgtaaattttcctgagcaacatcaatcactttttggtttagtt
tcttcagaggatgcatctctttctcttggaggtccaggtttttcagcagcaacagtgcct
tctgatatatgttcacatgtgtataaatcaccttgctcaatggctgaaggtcatactgaa
tattctgccggccctgttgaacattcatggtgttcttcaagatctccgtcatctcttctt
cgttcacaagcttcacattctcgtcgtttcatggcttcagctgttgcaaatagaaaatca
ttaagttttggttcaaagctgcaaattccactagctttaagttcagaaggttttggcttt
gctgtttcaaatacttcccaggatcaaaacatggttaatcaaaaaataccacaatctcca
tccatggacacaagcttgactaccacagattcactcaccactaagacatcttcgaaattt
aaaaaagtgaaaaaatttaaaacagcttccgatgatgctcaacgagtcagcgttcataaa
ctgaagaaaggctcagcagaagtattaaaaatagagaacctaaaattaaaccaagtcaca
catgaaggttccaagaaacatttggcgtttggcagtgttcagagagaaaaggaagataca
gagaaggtactaagaagcagaaattgtaaaataccttgggtgcagctcttcacgtggcaa
aataagagtggctactggaattttacatctgaccttggagtcttgttcgaaattaatttg
gaatatctaacagatgtttttcttatagacagaggcattaattctctaggtcaccgagca
gctgaagagatcgtatcgctgattgctacactcatgatcctacagttgatttgtttcact
gaacagttggaagggattaaattcaaatccctcctttgtttggaccagacattggattca
gggccaacatgttgggcaatacaacatgtaaaaaacgccatagcttgggctagaaaaaca
gacagacagtatccagcaatctgtagtcgtctggaactaggaagggactgggaatcagct
actcgtcatctgttacggattgatcctctcaaaaaagattcaccacttcagcagatgttt
aactga

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